RNA–Protein interactions for RNA: ENST00000456293.5

GAS5-227, Transcript of growth arrest specific 5, humanhuman

TSL 3

Gene GAS5, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAS5-227ENST00000456293 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
GAS5-227ENST00000456293 ARHGEF11O15085 1522 aa12.24□□□□□ -0.45
GAS5-227ENST00000456293 IGF1RP08069 1367 aa12.21□□□□□ -0.45
GAS5-227ENST00000456293 CEP170Q5SW79 1584 aa12.21□□□□□ -0.46
GAS5-227ENST00000456293 NUP160Q12769 1436 aa12.2□□□□□ -0.46
GAS5-227ENST00000456293 CARMIL1Q5VZK9 1371 aa12.16□□□□□ -0.46
GAS5-227ENST00000456293 SHROOM2Q13796 1616 aa12.15□□□□□ -0.47
GAS5-227ENST00000456293 RUSC2Q8N2Y8 1516 aa12.14□□□□□ -0.47
GAS5-227ENST00000456293 DMRT2Q9Y5R5 561 aa12.13□□□□□ -0.47
GAS5-227ENST00000456293 ARAP1Q96P48 1450 aa12.12□□□□□ -0.47
GAS5-227ENST00000456293 RAPGEF2Q9Y4G8 1499 aa12.1□□□□□ -0.47
GAS5-227ENST00000456293 CYB5RLQ6IPT4 315 aa12.1□□□□□ -0.47
GAS5-227ENST00000456293 KIAA0586Q9BVV6 1533 aa12.1□□□□□ -0.47
GAS5-227ENST00000456293 CTTNBP2Q8WZ74 1663 aa12.08□□□□□ -0.48
GAS5-227ENST00000456293 MAPK8IP2Q13387 824 aaPredicted RBP12.08□□□□□ -0.48
GAS5-227ENST00000456293 JPH4Q96JJ6 628 aa12.08□□□□□ -0.48
GAS5-227ENST00000456293 EEA1Q15075 1411 aa12.08□□□□□ -0.48
GAS5-227ENST00000456293 IQGAP2Q13576 1575 aa12.06□□□□□ -0.48
GAS5-227ENST00000456293 ERCC6L2Q5T890 1561 aa12.06□□□□□ -0.48
GAS5-227ENST00000456293 PRG4Q92954 1404 aaPredicted RBP12.06□□□□□ -0.48
GAS5-227ENST00000456293 PRXQ9BXM0 1461 aa12.03□□□□□ -0.48
GAS5-227ENST00000456293 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
GAS5-227ENST00000456293 CARMIL2Q6F5E8 1435 aa12□□□□□ -0.49
GAS5-227ENST00000456293 UGGT2Q9NYU1 1516 aa11.97□□□□□ -0.49
GAS5-227ENST00000456293 FAM9AQ8IZU1 332 aaPredicted RBP11.97□□□□□ -0.49
GAS5-227ENST00000456293 KIF21BO75037 1637 aa11.97□□□□□ -0.49
GAS5-227ENST00000456293 SCAF1Q9H7N4 1312 aaKnown RBP11.95□□□□□ -0.5
GAS5-227ENST00000456293 KIAA0556O60303 1618 aa11.93□□□□□ -0.5
GAS5-227ENST00000456293 TNIKQ9UKE5 1360 aa11.93□□□□□ -0.5
GAS5-227ENST00000456293 GOLGA3Q08378 1498 aa11.93□□□□□ -0.5
GAS5-227ENST00000456293 DISP1Q96F81 1524 aa11.92□□□□□ -0.5
GAS5-227ENST00000456293 PTPRGP23470 1445 aa11.92□□□□□ -0.5
GAS5-227ENST00000456293 ADCY10Q96PN6 1610 aa11.9□□□□□ -0.5
GAS5-227ENST00000456293 TTBK1Q5TCY1 1321 aaPredicted RBP11.88□□□□□ -0.51
GAS5-227ENST00000456293 NPM1P06748 294 aaKnown RBP eCLIP11.88□□□□□ -0.511e-27■■□□□ 12.8
GAS5-227ENST00000456293 TRHP20396 242 aaPredicted RBP11.88□□□□□ -0.51
GAS5-227ENST00000456293 SAMD9Q5K651 1589 aa11.84□□□□□ -0.51
GAS5-227ENST00000456293 UACAQ9BZF9 1416 aa11.84□□□□□ -0.51
GAS5-227ENST00000456293 UHRF1BP1LA0JNW5 1464 aa11.83□□□□□ -0.52
GAS5-227ENST00000456293 MAPKBP1O60336 1514 aa11.83□□□□□ -0.52
GAS5-227ENST00000456293 ABCC2Q92887 1545 aa11.83□□□□□ -0.52
GAS5-227ENST00000456293 UBTFP17480 764 aaKnown RBP11.83□□□□□ -0.52
GAS5-227ENST00000456293 KIF13AQ9H1H9 1805 aa11.83□□□□□ -0.52
GAS5-227ENST00000456293 EFCAB5A4FU69 1503 aa11.81□□□□□ -0.52
GAS5-227ENST00000456293 EHMT2Q96KQ7 1210 aa11.8□□□□□ -0.52
GAS5-227ENST00000456293 ABCA8O94911 1581 aa11.79□□□□□ -0.52
GAS5-227ENST00000456293 ZCCHC11Q5TAX3 1644 aaKnown RBP11.79□□□□□ -0.52
GAS5-227ENST00000456293 RANGAP1P46060 587 aaPredicted RBP11.78□□□□□ -0.52
GAS5-227ENST00000456293 P3H3Q8IVL6 736 aa11.78□□□□□ -0.52
GAS5-227ENST00000456293 PLB1Q6P1J6 1458 aa11.77□□□□□ -0.52
GAS5-227ENST00000456293 KDM5BQ9UGL1 1544 aa11.77□□□□□ -0.52
GAS5-227ENST00000456293 ABCC10Q5T3U5 1492 aa11.76□□□□□ -0.53
GAS5-227ENST00000456293 DIP2BQ9P265 1576 aa11.76□□□□□ -0.53
GAS5-227ENST00000456293 RAPGEF6Q8TEU7 1601 aa11.76□□□□□ -0.53
GAS5-227ENST00000456293 FHOD3Q2V2M9 1422 aa11.74□□□□□ -0.53
GAS5-227ENST00000456293 ASXL2Q76L83 1435 aa11.74□□□□□ -0.53
GAS5-227ENST00000456293 TSPOAP1O95153 1857 aa11.73□□□□□ -0.53
GAS5-227ENST00000456293 FAM69CQ0P6D2 419 aa11.72□□□□□ -0.53
GAS5-227ENST00000456293 GLI2P10070 1586 aa11.7□□□□□ -0.54
GAS5-227ENST00000456293 ARHGAP35Q9NRY4 1499 aa11.7□□□□□ -0.54
GAS5-227ENST00000456293 WDR7Q9Y4E6 1490 aa11.69□□□□□ -0.54
GAS5-227ENST00000456293 FMN1Q68DA7 1419 aa11.69□□□□□ -0.54
GAS5-227ENST00000456293 EPRSP07814 1512 aaKnown RBP11.67□□□□□ -0.54
GAS5-227ENST00000456293 ATP10BO94823 1461 aa11.67□□□□□ -0.54
GAS5-227ENST00000456293 CFAP43Q8NDM7 1665 aa11.66□□□□□ -0.54
GAS5-227ENST00000456293 NUP153P49790 1475 aaKnown RBP11.66□□□□□ -0.54
GAS5-227ENST00000456293 HECW1Q76N89 1606 aa11.66□□□□□ -0.54
GAS5-227ENST00000456293 MAP3K4Q9Y6R4 1608 aa11.66□□□□□ -0.54
GAS5-227ENST00000456293 ARID3CA6NKF2 412 aa11.65□□□□□ -0.54
GAS5-227ENST00000456293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
GAS5-227ENST00000456293 CACNB1Q02641 598 aaPredicted RBP11.65□□□□□ -0.54
GAS5-227ENST00000456293 HNRNPUL2Q1KMD3 747 aaKnown RBP11.65□□□□□ -0.54
GAS5-227ENST00000456293 CLIP1P30622 1438 aa11.64□□□□□ -0.55
GAS5-227ENST00000456293 PPRC1Q5VV67 1664 aaKnown RBP11.63□□□□□ -0.55
GAS5-227ENST00000456293 KCNH8Q96L42 1107 aa11.62□□□□□ -0.55
GAS5-227ENST00000456293 ATP1B4Q9UN42 357 aaPredicted RBP11.61□□□□□ -0.55
GAS5-227ENST00000456293 TEX14Q8IWB6 1497 aa11.61□□□□□ -0.55
GAS5-227ENST00000456293 KDM6BO15054 1643 aa11.6□□□□□ -0.55
GAS5-227ENST00000456293 HOXD11P31277 338 aaPredicted RBP11.6□□□□□ -0.55
GAS5-227ENST00000456293 LRRIQ1Q96JM4 1722 aa11.6□□□□□ -0.55
GAS5-227ENST00000456293 ABCA9Q8IUA7 1624 aa11.6□□□□□ -0.55
GAS5-227ENST00000456293 PCF11O94913 1555 aaKnown RBP11.59□□□□□ -0.55
GAS5-227ENST00000456293 PLEKHD1A6NEE1 506 aa11.59□□□□□ -0.55
GAS5-227ENST00000456293 PPP4R3CPQ6ZMV5 832 aa11.59□□□□□ -0.55
GAS5-227ENST00000456293 CDK13Q14004 1512 aaKnown RBP11.59□□□□□ -0.55
GAS5-227ENST00000456293 CEP162Q5TB80 1403 aa11.59□□□□□ -0.55
GAS5-227ENST00000456293 CD109Q6YHK3 1445 aa11.58□□□□□ -0.56
GAS5-227ENST00000456293 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.56
GAS5-227ENST00000456293 CCDC18Q5T9S5 1454 aa11.57□□□□□ -0.56
GAS5-227ENST00000456293 FYCO1Q9BQS8 1478 aa11.57□□□□□ -0.56
GAS5-227ENST00000456293 MAGI3Q5TCQ9 1506 aa11.56□□□□□ -0.56
GAS5-227ENST00000456293 LOC105371045A0A1W2PR82 267 aa11.56□□□□□ -0.56
GAS5-227ENST00000456293 CDK11AQ9UQ88 783 aaPredicted RBP11.56□□□□□ -0.56
GAS5-227ENST00000456293 KIF14Q15058 1648 aa11.53□□□□□ -0.56
GAS5-227ENST00000456293 MYO5CQ9NQX4 1742 aa11.52□□□□□ -0.56
GAS5-227ENST00000456293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.51□□□□□ -0.573e-8■□□□□ 10.1
GAS5-227ENST00000456293 CFAP74Q9C0B2 1584 aa11.51□□□□□ -0.57
GAS5-227ENST00000456293 TROQ12816 1431 aaPredicted RBP11.51□□□□□ -0.57
GAS5-227ENST00000456293 TTC37Q6PGP7 1564 aa11.5□□□□□ -0.57
GAS5-227ENST00000456293 RNF39Q9H2S5 420 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms