RNA–Protein interactions for RNA: ENST00000456075.5

TOP3B-212, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-212ENST00000456075 KIAA0586Q9BVV6 1533 aa17.31■□□□□ 0.36
TOP3B-212ENST00000456075 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
TOP3B-212ENST00000456075 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
TOP3B-212ENST00000456075 PRG4Q92954 1404 aaPredicted RBP17.29■□□□□ 0.36
TOP3B-212ENST00000456075 EEA1Q15075 1411 aa17.26■□□□□ 0.35
TOP3B-212ENST00000456075 ERCC6L2Q5T890 1561 aa17.25■□□□□ 0.35
TOP3B-212ENST00000456075 CSRNP3Q8WYN3 585 aa17.24■□□□□ 0.35
TOP3B-212ENST00000456075 FAM9AQ8IZU1 332 aaPredicted RBP17.23■□□□□ 0.35
TOP3B-212ENST00000456075 IQGAP2Q13576 1575 aa17.22■□□□□ 0.35
TOP3B-212ENST00000456075 PRXQ9BXM0 1461 aa17.2■□□□□ 0.34
TOP3B-212ENST00000456075 CARMIL2Q6F5E8 1435 aa17.19■□□□□ 0.34
TOP3B-212ENST00000456075 TTBK1Q5TCY1 1321 aaPredicted RBP17.14■□□□□ 0.33
TOP3B-212ENST00000456075 CTTNBP2Q8WZ74 1663 aa17.13■□□□□ 0.33
TOP3B-212ENST00000456075 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
TOP3B-212ENST00000456075 PTPRGP23470 1445 aa17.1■□□□□ 0.33
TOP3B-212ENST00000456075 TNIKQ9UKE5 1360 aa17.09■□□□□ 0.33
TOP3B-212ENST00000456075 UGGT2Q9NYU1 1516 aa17.09■□□□□ 0.33
TOP3B-212ENST00000456075 NPM1P06748 294 aaKnown RBP eCLIP17.08■□□□□ 0.32
TOP3B-212ENST00000456075 GOLGA3Q08378 1498 aa17.06■□□□□ 0.32
TOP3B-212ENST00000456075 DISP1Q96F81 1524 aa17.06■□□□□ 0.32
TOP3B-212ENST00000456075 KIF21BO75037 1637 aa17.04■□□□□ 0.32
TOP3B-212ENST00000456075 KIAA0556O60303 1618 aa17.03■□□□□ 0.32
TOP3B-212ENST00000456075 EHMT2Q96KQ7 1210 aa17.03■□□□□ 0.32
TOP3B-212ENST00000456075 UBTFP17480 764 aaKnown RBP17■□□□□ 0.31
TOP3B-212ENST00000456075 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
TOP3B-212ENST00000456075 ADCY10Q96PN6 1610 aa16.99■□□□□ 0.31
TOP3B-212ENST00000456075 UACAQ9BZF9 1416 aa16.96■□□□□ 0.31
TOP3B-212ENST00000456075 P3H3Q8IVL6 736 aa16.95■□□□□ 0.3
TOP3B-212ENST00000456075 ABCC2Q92887 1545 aa16.92■□□□□ 0.3
TOP3B-212ENST00000456075 UHRF1BP1LA0JNW5 1464 aa16.92■□□□□ 0.3
TOP3B-212ENST00000456075 MAPKBP1O60336 1514 aa16.9■□□□□ 0.3
TOP3B-212ENST00000456075 SAMD9Q5K651 1589 aa16.89■□□□□ 0.29
TOP3B-212ENST00000456075 PLB1Q6P1J6 1458 aa16.87■□□□□ 0.29
TOP3B-212ENST00000456075 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
TOP3B-212ENST00000456075 FAM69CQ0P6D2 419 aa16.85■□□□□ 0.29
TOP3B-212ENST00000456075 FHOD3Q2V2M9 1422 aa16.84■□□□□ 0.29
TOP3B-212ENST00000456075 ABCC10Q5T3U5 1492 aa16.83■□□□□ 0.28
TOP3B-212ENST00000456075 KDM5BQ9UGL1 1544 aa16.83■□□□□ 0.28
TOP3B-212ENST00000456075 ABCA8O94911 1581 aa16.82■□□□□ 0.28
TOP3B-212ENST00000456075 ASXL2Q76L83 1435 aa16.82■□□□□ 0.28
TOP3B-212ENST00000456075 ZCCHC11Q5TAX3 1644 aaKnown RBP16.81■□□□□ 0.28
TOP3B-212ENST00000456075 ARID3CA6NKF2 412 aa16.79■□□□□ 0.28
TOP3B-212ENST00000456075 DIP2BQ9P265 1576 aa16.79■□□□□ 0.28
TOP3B-212ENST00000456075 KIF13AQ9H1H9 1805 aa16.77■□□□□ 0.28
TOP3B-212ENST00000456075 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.77■□□□□ 0.28
TOP3B-212ENST00000456075 HNRNPUL2Q1KMD3 747 aaKnown RBP16.77■□□□□ 0.28
TOP3B-212ENST00000456075 RAPGEF6Q8TEU7 1601 aa16.77■□□□□ 0.27
TOP3B-212ENST00000456075 ARHGAP35Q9NRY4 1499 aa16.73■□□□□ 0.27
TOP3B-212ENST00000456075 WDR7Q9Y4E6 1490 aa16.73■□□□□ 0.27
TOP3B-212ENST00000456075 FMN1Q68DA7 1419 aa16.73■□□□□ 0.27
TOP3B-212ENST00000456075 ATP1B4Q9UN42 357 aaPredicted RBP16.72■□□□□ 0.27
TOP3B-212ENST00000456075 KCNH8Q96L42 1107 aa16.71■□□□□ 0.27
TOP3B-212ENST00000456075 EPRSP07814 1512 aaKnown RBP16.7■□□□□ 0.26
TOP3B-212ENST00000456075 ATP10BO94823 1461 aa16.7■□□□□ 0.26
TOP3B-212ENST00000456075 NUP153P49790 1475 aaKnown RBP16.69■□□□□ 0.26
TOP3B-212ENST00000456075 CLIP1P30622 1438 aa16.69■□□□□ 0.26
TOP3B-212ENST00000456075 GLI2P10070 1586 aa16.68■□□□□ 0.26
TOP3B-212ENST00000456075 TSPOAP1O95153 1857 aa16.66■□□□□ 0.26
TOP3B-212ENST00000456075 PLEKHD1A6NEE1 506 aa16.64■□□□□ 0.25
TOP3B-212ENST00000456075 HECW1Q76N89 1606 aa16.63■□□□□ 0.25
TOP3B-212ENST00000456075 TEX14Q8IWB6 1497 aa16.61■□□□□ 0.25
TOP3B-212ENST00000456075 MAP3K4Q9Y6R4 1608 aa16.6■□□□□ 0.25
TOP3B-212ENST00000456075 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
TOP3B-212ENST00000456075 CD109Q6YHK3 1445 aa16.6■□□□□ 0.25
TOP3B-212ENST00000456075 LOC105371045A0A1W2PR82 267 aa16.59■□□□□ 0.25
TOP3B-212ENST00000456075 CEP162Q5TB80 1403 aa16.59■□□□□ 0.25
TOP3B-212ENST00000456075 CDK13Q14004 1512 aaKnown RBP16.58■□□□□ 0.24
TOP3B-212ENST00000456075 CFAP43Q8NDM7 1665 aa16.57■□□□□ 0.24
TOP3B-212ENST00000456075 KDM6BO15054 1643 aa16.57■□□□□ 0.24
TOP3B-212ENST00000456075 CASKIN1Q8WXD9 1431 aa16.56■□□□□ 0.24
TOP3B-212ENST00000456075 PCF11O94913 1555 aaKnown RBP16.55■□□□□ 0.24
TOP3B-212ENST00000456075 PPRC1Q5VV67 1664 aaKnown RBP16.54■□□□□ 0.24
TOP3B-212ENST00000456075 CCDC18Q5T9S5 1454 aa16.54■□□□□ 0.24
TOP3B-212ENST00000456075 FYCO1Q9BQS8 1478 aa16.54■□□□□ 0.24
TOP3B-212ENST00000456075 MAGI3Q5TCQ9 1506 aa16.53■□□□□ 0.24
TOP3B-212ENST00000456075 ABCA9Q8IUA7 1624 aa16.52■□□□□ 0.24
TOP3B-212ENST00000456075 TROQ12816 1431 aaPredicted RBP16.46■□□□□ 0.23
TOP3B-212ENST00000456075 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.45■□□□□ 0.22
TOP3B-212ENST00000456075 KIF14Q15058 1648 aa16.45■□□□□ 0.22
TOP3B-212ENST00000456075 PHLDB1Q86UU1 1377 aa16.44■□□□□ 0.22
TOP3B-212ENST00000456075 LRRIQ1Q96JM4 1722 aa16.44■□□□□ 0.22
TOP3B-212ENST00000456075 TTC37Q6PGP7 1564 aa16.43■□□□□ 0.22
TOP3B-212ENST00000456075 NEO1Q92859 1461 aa16.42■□□□□ 0.22
TOP3B-212ENST00000456075 COL17A1Q9UMD9 1497 aaPredicted RBP16.41■□□□□ 0.22
TOP3B-212ENST00000456075 CFAP74Q9C0B2 1584 aa16.4■□□□□ 0.22
TOP3B-212ENST00000456075 FANCAO15360 1455 aa16.4■□□□□ 0.22
TOP3B-212ENST00000456075 MTUS2Q5JR59 1369 aa16.39■□□□□ 0.21
TOP3B-212ENST00000456075 ARAP3Q8WWN8 1544 aa16.39■□□□□ 0.21
TOP3B-212ENST00000456075 VPS8Q8N3P4 1428 aa16.38■□□□□ 0.21
TOP3B-212ENST00000456075 PLCH2O75038 1416 aa16.37■□□□□ 0.21
TOP3B-212ENST00000456075 EFCAB2Q5VUJ9 269 aa16.37■□□□□ 0.21
TOP3B-212ENST00000456075 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
TOP3B-212ENST00000456075 MYO5CQ9NQX4 1742 aa16.36■□□□□ 0.21
TOP3B-212ENST00000456075 ARHGAP5Q13017 1502 aa16.35■□□□□ 0.21
TOP3B-212ENST00000456075 RAPGEF3O95398 923 aa16.34■□□□□ 0.21
TOP3B-212ENST00000456075 DENND4BO75064 1496 aaPredicted RBP16.33■□□□□ 0.2
TOP3B-212ENST00000456075 ADGRL1O94910 1474 aa16.32■□□□□ 0.2
TOP3B-212ENST00000456075 APLP2Q06481 763 aa16.32■□□□□ 0.2
TOP3B-212ENST00000456075 EHBP1L1Q8N3D4 1523 aa16.31■□□□□ 0.2
TOP3B-212ENST00000456075 AEBP2Q6ZN18 517 aaPredicted RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms