RNA–Protein interactions for RNA: ENST00000455496.1

NIPSNAP1-204, Transcript of nipsnap homolog 1, humanhuman

TSL 3

Gene NIPSNAP1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1-204ENST00000455496 PBRM1Q86U86 1689 aa18.05■□□□□ 0.48
NIPSNAP1-204ENST00000455496 SHROOM2Q13796 1616 aa18.02■□□□□ 0.48
NIPSNAP1-204ENST00000455496 PRG4Q92954 1404 aaPredicted RBP18■□□□□ 0.47
NIPSNAP1-204ENST00000455496 TSPOAP1O95153 1857 aa17.97■□□□□ 0.47
NIPSNAP1-204ENST00000455496 JPH4Q96JJ6 628 aa17.97■□□□□ 0.47
NIPSNAP1-204ENST00000455496 CUX1P39880 1505 aa17.97■□□□□ 0.47
NIPSNAP1-204ENST00000455496 ABCA10Q8WWZ4 1543 aa17.92■□□□□ 0.46
NIPSNAP1-204ENST00000455496 ABCA5Q8WWZ7 1642 aa17.9■□□□□ 0.46
NIPSNAP1-204ENST00000455496 DISP3Q9P2K9 1392 aa17.89■□□□□ 0.45
NIPSNAP1-204ENST00000455496 FHAD1B1AJZ9 1412 aa17.88■□□□□ 0.45
NIPSNAP1-204ENST00000455496 ADAMTS12P58397 1594 aa17.86■□□□□ 0.45
NIPSNAP1-204ENST00000455496 ADCY10Q96PN6 1610 aa17.85■□□□□ 0.45
NIPSNAP1-204ENST00000455496 TOP2BQ02880 1626 aa17.79■□□□□ 0.44
NIPSNAP1-204ENST00000455496 COL17A1Q9UMD9 1497 aaPredicted RBP17.77■□□□□ 0.44
NIPSNAP1-204ENST00000455496 GLI2P10070 1586 aa17.7■□□□□ 0.42
NIPSNAP1-204ENST00000455496 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.42
NIPSNAP1-204ENST00000455496 PPRC1Q5VV67 1664 aaKnown RBP17.7■□□□□ 0.42
NIPSNAP1-204ENST00000455496 PLB1Q6P1J6 1458 aa17.69■□□□□ 0.42
NIPSNAP1-204ENST00000455496 ASXL2Q76L83 1435 aa17.68■□□□□ 0.42
NIPSNAP1-204ENST00000455496 ERICH3Q5RHP9 1530 aa17.67■□□□□ 0.42
NIPSNAP1-204ENST00000455496 TEX14Q8IWB6 1497 aa17.67■□□□□ 0.42
NIPSNAP1-204ENST00000455496 SPATA31D1Q6ZQQ2 1576 aa17.63■□□□□ 0.41
NIPSNAP1-204ENST00000455496 CERKQ8TCT0 537 aa17.63■□□□□ 0.41
NIPSNAP1-204ENST00000455496 PTPRGP23470 1445 aa17.62■□□□□ 0.41
NIPSNAP1-204ENST00000455496 RUSC2Q8N2Y8 1516 aa17.62■□□□□ 0.41
NIPSNAP1-204ENST00000455496 ABCC2Q92887 1545 aa17.61■□□□□ 0.41
NIPSNAP1-204ENST00000455496 TTBK1Q5TCY1 1321 aaPredicted RBP17.57■□□□□ 0.4
NIPSNAP1-204ENST00000455496 EPRSP07814 1512 aaKnown RBP17.54■□□□□ 0.4
NIPSNAP1-204ENST00000455496 KIAA0586Q9BVV6 1533 aa17.54■□□□□ 0.4
NIPSNAP1-204ENST00000455496 PTPRMP28827 1452 aa17.53■□□□□ 0.4
NIPSNAP1-204ENST00000455496 MAP3K4Q9Y6R4 1608 aa17.52■□□□□ 0.4
NIPSNAP1-204ENST00000455496 PCF11O94913 1555 aaKnown RBP17.5■□□□□ 0.39
NIPSNAP1-204ENST00000455496 TNIKQ9UKE5 1360 aa17.49■□□□□ 0.39
NIPSNAP1-204ENST00000455496 UHRF1BP1LA0JNW5 1464 aa17.46■□□□□ 0.39
NIPSNAP1-204ENST00000455496 CARMIL2Q6F5E8 1435 aa17.44■□□□□ 0.38
NIPSNAP1-204ENST00000455496 UACAQ9BZF9 1416 aa17.43■□□□□ 0.38
NIPSNAP1-204ENST00000455496 KIF21BO75037 1637 aa17.43■□□□□ 0.38
NIPSNAP1-204ENST00000455496 CUL7Q14999 1698 aa17.42■□□□□ 0.38
NIPSNAP1-204ENST00000455496 HSPA2P54652 639 aa17.4■□□□□ 0.38
NIPSNAP1-204ENST00000455496 KDM5BQ9UGL1 1544 aa17.38■□□□□ 0.37
NIPSNAP1-204ENST00000455496 ADAMTSL3P82987 1691 aa17.37■□□□□ 0.37
NIPSNAP1-204ENST00000455496 CD109Q6YHK3 1445 aa17.37■□□□□ 0.37
NIPSNAP1-204ENST00000455496 MAGI3Q5TCQ9 1506 aa17.37■□□□□ 0.37
NIPSNAP1-204ENST00000455496 BIVM-ERCC5R4GMW8 1640 aa17.35■□□□□ 0.37
NIPSNAP1-204ENST00000455496 ARID4BQ4LE39 1312 aaPredicted RBP17.32■□□□□ 0.36
NIPSNAP1-204ENST00000455496 WDR7Q9Y4E6 1490 aa17.31■□□□□ 0.36
NIPSNAP1-204ENST00000455496 KCNH8Q96L42 1107 aa17.29■□□□□ 0.36
NIPSNAP1-204ENST00000455496 ZCCHC11Q5TAX3 1644 aaKnown RBP17.27■□□□□ 0.36
NIPSNAP1-204ENST00000455496 ARAP3Q8WWN8 1544 aa17.26■□□□□ 0.35
NIPSNAP1-204ENST00000455496 IGF1RP08069 1367 aa17.25■□□□□ 0.35
NIPSNAP1-204ENST00000455496 DMRT2Q9Y5R5 561 aa17.24■□□□□ 0.35
NIPSNAP1-204ENST00000455496 MADDQ8WXG6 1647 aa17.24■□□□□ 0.35
NIPSNAP1-204ENST00000455496 CFAP43Q8NDM7 1665 aa17.23■□□□□ 0.35
NIPSNAP1-204ENST00000455496 BCORL1Q5H9F3 1711 aa17.22■□□□□ 0.35
NIPSNAP1-204ENST00000455496 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
NIPSNAP1-204ENST00000455496 PHLDB1Q86UU1 1377 aa17.2■□□□□ 0.34
NIPSNAP1-204ENST00000455496 RAPGEF3O95398 923 aa17.17■□□□□ 0.34
NIPSNAP1-204ENST00000455496 DISP1Q96F81 1524 aa17.16■□□□□ 0.34
NIPSNAP1-204ENST00000455496 IQGAP2Q13576 1575 aa17.15■□□□□ 0.34
NIPSNAP1-204ENST00000455496 YEATS2Q9ULM3 1422 aa17.14■□□□□ 0.33
NIPSNAP1-204ENST00000455496 RIMS1Q86UR5 1692 aaKnown RBP17.14■□□□□ 0.33
NIPSNAP1-204ENST00000455496 CARMIL1Q5VZK9 1371 aa17.13■□□□□ 0.33
NIPSNAP1-204ENST00000455496 KIF27Q86VH2 1401 aa17.12■□□□□ 0.33
NIPSNAP1-204ENST00000455496 POGZQ7Z3K3 1410 aa17.08■□□□□ 0.32
NIPSNAP1-204ENST00000455496 IQSEC2Q5JU85 1478 aa17.04■□□□□ 0.32
NIPSNAP1-204ENST00000455496 UGGT2Q9NYU1 1516 aa17.02■□□□□ 0.32
NIPSNAP1-204ENST00000455496 NEO1Q92859 1461 aa17.01■□□□□ 0.31
NIPSNAP1-204ENST00000455496 FANCAO15360 1455 aa16.99■□□□□ 0.31
NIPSNAP1-204ENST00000455496 PTPRTO14522 1441 aa16.99■□□□□ 0.31
NIPSNAP1-204ENST00000455496 KIAA0556O60303 1618 aa16.99■□□□□ 0.31
NIPSNAP1-204ENST00000455496 MLECQ14165 292 aa16.98■□□□□ 0.31
NIPSNAP1-204ENST00000455496 ARHGEF40Q8TER5 1519 aa16.96■□□□□ 0.31
NIPSNAP1-204ENST00000455496 UBAP1LF5GYI3 381 aa16.96■□□□□ 0.31
NIPSNAP1-204ENST00000455496 AKNAQ7Z591 1439 aa16.96■□□□□ 0.3
NIPSNAP1-204ENST00000455496 STRCQ7RTU9 1775 aa16.95■□□□□ 0.3
NIPSNAP1-204ENST00000455496 FRMPD1Q5SYB0 1578 aa16.94■□□□□ 0.3
NIPSNAP1-204ENST00000455496 LTBP4Q8N2S1 1624 aa16.93■□□□□ 0.3
NIPSNAP1-204ENST00000455496 PREX1Q8TCU6 1659 aa16.93■□□□□ 0.3
NIPSNAP1-204ENST00000455496 UHRF1BP1Q6BDS2 1440 aa16.92■□□□□ 0.3
NIPSNAP1-204ENST00000455496 ABCA8O94911 1581 aa16.92■□□□□ 0.3
NIPSNAP1-204ENST00000455496 TTC37Q6PGP7 1564 aa16.91■□□□□ 0.3
NIPSNAP1-204ENST00000455496 FAM9AQ8IZU1 332 aaPredicted RBP16.91■□□□□ 0.3
NIPSNAP1-204ENST00000455496 ABCA9Q8IUA7 1624 aa16.9■□□□□ 0.3
NIPSNAP1-204ENST00000455496 CEBPAP49715 358 aaPredicted RBP16.9■□□□□ 0.3
NIPSNAP1-204ENST00000455496 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
NIPSNAP1-204ENST00000455496 DENND4BO75064 1496 aaPredicted RBP16.9■□□□□ 0.3
NIPSNAP1-204ENST00000455496 MED1Q15648 1581 aaPredicted RBP16.87■□□□□ 0.29
NIPSNAP1-204ENST00000455496 ARID3CA6NKF2 412 aa16.87■□□□□ 0.29
NIPSNAP1-204ENST00000455496 FHOD3Q2V2M9 1422 aa16.87■□□□□ 0.29
NIPSNAP1-204ENST00000455496 FER1L4A9Z1Z3 1794 aa16.86■□□□□ 0.29
NIPSNAP1-204ENST00000455496 GOLGA3Q08378 1498 aa16.85■□□□□ 0.29
NIPSNAP1-204ENST00000455496 ATP10BO94823 1461 aa16.83■□□□□ 0.28
NIPSNAP1-204ENST00000455496 EFCAB5A4FU69 1503 aa16.82■□□□□ 0.28
NIPSNAP1-204ENST00000455496 SETD1BQ9UPS6 1966 aaKnown RBP16.82■□□□□ 0.28
NIPSNAP1-204ENST00000455496 ZFYVE16Q7Z3T8 1539 aa16.81■□□□□ 0.28
NIPSNAP1-204ENST00000455496 RAPGEF2Q9Y4G8 1499 aa16.81■□□□□ 0.28
NIPSNAP1-204ENST00000455496 SUPT5HO00267 1087 aaKnown RBP16.81■□□□□ 0.28
NIPSNAP1-204ENST00000455496 MAGI2Q86UL8 1455 aa16.8■□□□□ 0.28
NIPSNAP1-204ENST00000455496 HSPA1LP34931 641 aa16.8■□□□□ 0.28
NIPSNAP1-204ENST00000455496 ARHGEF12Q9NZN5 1544 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms