RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 PRXQ9BXM0 1461 aa24.56■■□□□ 1.52
CLCN1-203ENST00000455478 FAM9AQ8IZU1 332 aaPredicted RBP24.54■■□□□ 1.52
CLCN1-203ENST00000455478 KIAA0586Q9BVV6 1533 aa24.51■■□□□ 1.51
CLCN1-203ENST00000455478 SHROOM2Q13796 1616 aa24.5■■□□□ 1.51
CLCN1-203ENST00000455478 JPH4Q96JJ6 628 aa24.5■■□□□ 1.51
CLCN1-203ENST00000455478 ERCC6L2Q5T890 1561 aa24.44■■□□□ 1.5
CLCN1-203ENST00000455478 ARAP1Q96P48 1450 aa24.43■■□□□ 1.5
CLCN1-203ENST00000455478 CYB5RLQ6IPT4 315 aa24.41■■□□□ 1.5
CLCN1-203ENST00000455478 PRG4Q92954 1404 aaPredicted RBP24.41■■□□□ 1.5
CLCN1-203ENST00000455478 IQGAP2Q13576 1575 aa24.37■■□□□ 1.49
CLCN1-203ENST00000455478 KIF21BO75037 1637 aa24.32■■□□□ 1.48
CLCN1-203ENST00000455478 CTTNBP2Q8WZ74 1663 aa24.32■■□□□ 1.48
CLCN1-203ENST00000455478 UGGT2Q9NYU1 1516 aa24.27■■□□□ 1.48
CLCN1-203ENST00000455478 CARMIL2Q6F5E8 1435 aa24.23■■□□□ 1.47
CLCN1-203ENST00000455478 DISP1Q96F81 1524 aa24.23■■□□□ 1.47
CLCN1-203ENST00000455478 EHMT2Q96KQ7 1210 aa24.21■■□□□ 1.47
CLCN1-203ENST00000455478 GOLGA3Q08378 1498 aa24.18■■□□□ 1.46
CLCN1-203ENST00000455478 TNIKQ9UKE5 1360 aa24.16■■□□□ 1.46
CLCN1-203ENST00000455478 UBTFP17480 764 aaKnown RBP24.14■■□□□ 1.45
CLCN1-203ENST00000455478 PTPRGP23470 1445 aa24.14■■□□□ 1.45
CLCN1-203ENST00000455478 KIAA0556O60303 1618 aa24.13■■□□□ 1.45
CLCN1-203ENST00000455478 TTBK1Q5TCY1 1321 aaPredicted RBP24.1■■□□□ 1.45
CLCN1-203ENST00000455478 RANGAP1P46060 587 aaPredicted RBP24.06■■□□□ 1.44
CLCN1-203ENST00000455478 SAMD9Q5K651 1589 aa24.04■■□□□ 1.44
CLCN1-203ENST00000455478 P3H3Q8IVL6 736 aa24.04■■□□□ 1.44
CLCN1-203ENST00000455478 ADCY10Q96PN6 1610 aa24.02■■□□□ 1.44
CLCN1-203ENST00000455478 UACAQ9BZF9 1416 aa23.98■■□□□ 1.43
CLCN1-203ENST00000455478 UHRF1BP1LA0JNW5 1464 aa23.94■■□□□ 1.42
CLCN1-203ENST00000455478 EFCAB5A4FU69 1503 aa23.94■■□□□ 1.42
CLCN1-203ENST00000455478 NPM1P06748 294 aaKnown RBP eCLIP23.92■■□□□ 1.42
CLCN1-203ENST00000455478 PLB1Q6P1J6 1458 aa23.92■■□□□ 1.42
CLCN1-203ENST00000455478 FHOD3Q2V2M9 1422 aa23.92■■□□□ 1.42
CLCN1-203ENST00000455478 ABCC2Q92887 1545 aa23.91■■□□□ 1.42
CLCN1-203ENST00000455478 ABCA8O94911 1581 aa23.9■■□□□ 1.42
CLCN1-203ENST00000455478 LOC105371045A0A1W2PR82 267 aa23.89■■□□□ 1.41
CLCN1-203ENST00000455478 ARHGAP35Q9NRY4 1499 aa23.88■■□□□ 1.41
CLCN1-203ENST00000455478 KDM5BQ9UGL1 1544 aa23.84■■□□□ 1.41
CLCN1-203ENST00000455478 TRHP20396 242 aaPredicted RBP23.83■■□□□ 1.41
CLCN1-203ENST00000455478 MAPKBP1O60336 1514 aa23.82■■□□□ 1.4
CLCN1-203ENST00000455478 ZCCHC11Q5TAX3 1644 aaKnown RBP23.77■■□□□ 1.4
CLCN1-203ENST00000455478 RAPGEF6Q8TEU7 1601 aa23.77■■□□□ 1.4
CLCN1-203ENST00000455478 CLIP1P30622 1438 aa23.77■■□□□ 1.4
CLCN1-203ENST00000455478 FMN1Q68DA7 1419 aa23.73■■□□□ 1.39
CLCN1-203ENST00000455478 ASXL2Q76L83 1435 aa23.73■■□□□ 1.39
CLCN1-203ENST00000455478 ATP10BO94823 1461 aa23.72■■□□□ 1.39
CLCN1-203ENST00000455478 NUP153P49790 1475 aaKnown RBP23.71■■□□□ 1.39
CLCN1-203ENST00000455478 ABCC10Q5T3U5 1492 aa23.71■■□□□ 1.39
CLCN1-203ENST00000455478 ARID3CA6NKF2 412 aa23.71■■□□□ 1.39
CLCN1-203ENST00000455478 CEP162Q5TB80 1403 aa23.7■■□□□ 1.38
CLCN1-203ENST00000455478 KIF13AQ9H1H9 1805 aa23.69■■□□□ 1.38
CLCN1-203ENST00000455478 FAM69CQ0P6D2 419 aa23.67■■□□□ 1.38
CLCN1-203ENST00000455478 DIP2BQ9P265 1576 aa23.65■■□□□ 1.38
CLCN1-203ENST00000455478 WDR7Q9Y4E6 1490 aa23.62■■□□□ 1.37
CLCN1-203ENST00000455478 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.6■■□□□ 1.37
CLCN1-203ENST00000455478 HNRNPUL2Q1KMD3 747 aaKnown RBP23.6■■□□□ 1.37
CLCN1-203ENST00000455478 ATP1B4Q9UN42 357 aaPredicted RBP23.6■■□□□ 1.37
CLCN1-203ENST00000455478 EPRSP07814 1512 aaKnown RBP23.59■■□□□ 1.37
CLCN1-203ENST00000455478 HECW1Q76N89 1606 aa23.58■■□□□ 1.36
CLCN1-203ENST00000455478 CASKIN1Q8WXD9 1431 aa23.58■■□□□ 1.36
CLCN1-203ENST00000455478 GLI2P10070 1586 aa23.57■■□□□ 1.36
CLCN1-203ENST00000455478 KCNH8Q96L42 1107 aa23.56■■□□□ 1.36
CLCN1-203ENST00000455478 CDK13Q14004 1512 aaKnown RBP23.55■■□□□ 1.36
CLCN1-203ENST00000455478 PCF11O94913 1555 aaKnown RBP23.55■■□□□ 1.36
CLCN1-203ENST00000455478 LRRIQ1Q96JM4 1722 aa23.53■■□□□ 1.36
CLCN1-203ENST00000455478 PLEKHD1A6NEE1 506 aa23.52■■□□□ 1.36
CLCN1-203ENST00000455478 FYCO1Q9BQS8 1478 aa23.5■■□□□ 1.35
CLCN1-203ENST00000455478 TSPOAP1O95153 1857 aa23.47■■□□□ 1.35
CLCN1-203ENST00000455478 MAP3K4Q9Y6R4 1608 aa23.46■■□□□ 1.35
CLCN1-203ENST00000455478 CCDC18Q5T9S5 1454 aa23.43■■□□□ 1.34
CLCN1-203ENST00000455478 CDK11AQ9UQ88 783 aaPredicted RBP23.43■■□□□ 1.34
CLCN1-203ENST00000455478 PPRC1Q5VV67 1664 aaKnown RBP23.42■■□□□ 1.34
CLCN1-203ENST00000455478 CFAP43Q8NDM7 1665 aa23.41■■□□□ 1.34
CLCN1-203ENST00000455478 CD109Q6YHK3 1445 aa23.41■■□□□ 1.34
CLCN1-203ENST00000455478 VPS8Q8N3P4 1428 aa23.4■■□□□ 1.34
CLCN1-203ENST00000455478 ABCA9Q8IUA7 1624 aa23.4■■□□□ 1.34
CLCN1-203ENST00000455478 TROQ12816 1431 aaPredicted RBP23.36■■□□□ 1.33
CLCN1-203ENST00000455478 MAGI3Q5TCQ9 1506 aa23.35■■□□□ 1.33
CLCN1-203ENST00000455478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.34■■□□□ 1.33
CLCN1-203ENST00000455478 TEX14Q8IWB6 1497 aa23.32■■□□□ 1.32
CLCN1-203ENST00000455478 KIF14Q15058 1648 aa23.3■■□□□ 1.32
CLCN1-203ENST00000455478 TTC37Q6PGP7 1564 aa23.29■■□□□ 1.32
CLCN1-203ENST00000455478 KDM6BO15054 1643 aa23.23■■□□□ 1.31
CLCN1-203ENST00000455478 COL17A1Q9UMD9 1497 aaPredicted RBP23.23■■□□□ 1.31
CLCN1-203ENST00000455478 MTUS2Q5JR59 1369 aa23.22■■□□□ 1.31
CLCN1-203ENST00000455478 TIAM1Q13009 1591 aa23.22■■□□□ 1.31
CLCN1-203ENST00000455478 PLCH2O75038 1416 aa23.21■■□□□ 1.31
CLCN1-203ENST00000455478 MAP3K1Q13233 1512 aa23.19■■□□□ 1.3
CLCN1-203ENST00000455478 NEO1Q92859 1461 aa23.18■■□□□ 1.3
CLCN1-203ENST00000455478 PHLDB1Q86UU1 1377 aa23.18■■□□□ 1.3
CLCN1-203ENST00000455478 MYO5CQ9NQX4 1742 aa23.17■■□□□ 1.3
CLCN1-203ENST00000455478 FANCAO15360 1455 aa23.17■■□□□ 1.3
CLCN1-203ENST00000455478 EHBP1L1Q8N3D4 1523 aa23.16■■□□□ 1.3
CLCN1-203ENST00000455478 ARAP3Q8WWN8 1544 aa23.15■■□□□ 1.3
CLCN1-203ENST00000455478 LRRC9Q6ZRR7 1453 aa23.14■■□□□ 1.29
CLCN1-203ENST00000455478 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
CLCN1-203ENST00000455478 EFCAB2Q5VUJ9 269 aa23.13■■□□□ 1.29
CLCN1-203ENST00000455478 AKNAQ7Z591 1439 aa23.13■■□□□ 1.29
CLCN1-203ENST00000455478 CDC42BPBQ9Y5S2 1711 aa23.11■■□□□ 1.29
CLCN1-203ENST00000455478 CFAP74Q9C0B2 1584 aa23.11■■□□□ 1.29
CLCN1-203ENST00000455478 APLP2Q06481 763 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms