RNA–Protein interactions for RNA: ENST00000455214.1

PLXNB3-204, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 489 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-204ENST00000455214 KIAA0586Q9BVV6 1533 aa34.3■■■■□ 3.08
PLXNB3-204ENST00000455214 IQGAP2Q13576 1575 aa34.28■■■■□ 3.08
PLXNB3-204ENST00000455214 SHROOM2Q13796 1616 aa34.26■■■■□ 3.08
PLXNB3-204ENST00000455214 UGGT2Q9NYU1 1516 aa34.11■■■■□ 3.05
PLXNB3-204ENST00000455214 EHMT2Q96KQ7 1210 aa34.08■■■■□ 3.05
PLXNB3-204ENST00000455214 DNAJC5Q9H3Z4 198 aa34.06■■■■□ 3.04
PLXNB3-204ENST00000455214 UBTFP17480 764 aaKnown RBP34.04■■■■□ 3.04
PLXNB3-204ENST00000455214 TNIKQ9UKE5 1360 aa34.03■■■■□ 3.04
PLXNB3-204ENST00000455214 JPH4Q96JJ6 628 aa34.01■■■■□ 3.03
PLXNB3-204ENST00000455214 SAMD9Q5K651 1589 aa33.98■■■■□ 3.03
PLXNB3-204ENST00000455214 ERCC6L2Q5T890 1561 aa33.98■■■■□ 3.03
PLXNB3-204ENST00000455214 ARHGEF11O15085 1522 aa33.98■■■■□ 3.03
PLXNB3-204ENST00000455214 KIAA0556O60303 1618 aa33.97■■■■□ 3.03
PLXNB3-204ENST00000455214 DISP1Q96F81 1524 aa33.96■■■■□ 3.03
PLXNB3-204ENST00000455214 PRG4Q92954 1404 aaPredicted RBP33.96■■■■□ 3.03
PLXNB3-204ENST00000455214 RIMBP3CA6NJZ7 1639 aa33.95■■■■□ 3.03
PLXNB3-204ENST00000455214 RIMBP3BA6NNM3 1639 aa33.95■■■■□ 3.03
PLXNB3-204ENST00000455214 RIMBP3Q9UFD9 1639 aa33.95■■■■□ 3.03
PLXNB3-204ENST00000455214 LOC105371045A0A1W2PR82 267 aa33.94■■■■□ 3.02
PLXNB3-204ENST00000455214 EFCAB5A4FU69 1503 aa33.91■■■■□ 3.02
PLXNB3-204ENST00000455214 CARMIL2Q6F5E8 1435 aa33.86■■■■□ 3.01
PLXNB3-204ENST00000455214 ARHGAP35Q9NRY4 1499 aa33.79■■■■□ 3
PLXNB3-204ENST00000455214 CEP162Q5TB80 1403 aa33.77■■■■□ 3
PLXNB3-204ENST00000455214 ARAP1Q96P48 1450 aa33.76■■■■□ 3
PLXNB3-204ENST00000455214 CLIP1P30622 1438 aa33.73■■■□□ 2.99
PLXNB3-204ENST00000455214 RANGAP1P46060 587 aaPredicted RBP33.69■■■□□ 2.98
PLXNB3-204ENST00000455214 FHOD3Q2V2M9 1422 aa33.68■■■□□ 2.98
PLXNB3-204ENST00000455214 PTPRGP23470 1445 aa33.61■■■□□ 2.97
PLXNB3-204ENST00000455214 P3H3Q8IVL6 736 aa33.58■■■□□ 2.97
PLXNB3-204ENST00000455214 ABCA8O94911 1581 aa33.54■■■□□ 2.96
PLXNB3-204ENST00000455214 FMN1Q68DA7 1419 aa33.49■■■□□ 2.95
PLXNB3-204ENST00000455214 RAPGEF6Q8TEU7 1601 aa33.49■■■□□ 2.95
PLXNB3-204ENST00000455214 ADCY10Q96PN6 1610 aa33.49■■■□□ 2.95
PLXNB3-204ENST00000455214 ABCC2Q92887 1545 aa33.47■■■□□ 2.95
PLXNB3-204ENST00000455214 UHRF1BP1LA0JNW5 1464 aa33.46■■■□□ 2.95
PLXNB3-204ENST00000455214 PLB1Q6P1J6 1458 aa33.46■■■□□ 2.95
PLXNB3-204ENST00000455214 UACAQ9BZF9 1416 aa33.45■■■□□ 2.95
PLXNB3-204ENST00000455214 CYB5RLQ6IPT4 315 aa33.43■■■□□ 2.94
PLXNB3-204ENST00000455214 TTBK1Q5TCY1 1321 aaPredicted RBP33.42■■■□□ 2.94
PLXNB3-204ENST00000455214 PCF11O94913 1555 aaKnown RBP33.42■■■□□ 2.94
PLXNB3-204ENST00000455214 HECW1Q76N89 1606 aa33.36■■■□□ 2.93
PLXNB3-204ENST00000455214 VPS8Q8N3P4 1428 aa33.34■■■□□ 2.93
PLXNB3-204ENST00000455214 LRRIQ1Q96JM4 1722 aa33.33■■■□□ 2.93
PLXNB3-204ENST00000455214 NUP153P49790 1475 aaKnown RBP33.32■■■□□ 2.92
PLXNB3-204ENST00000455214 FYCO1Q9BQS8 1478 aa33.32■■■□□ 2.92
PLXNB3-204ENST00000455214 CASKIN1Q8WXD9 1431 aa33.32■■■□□ 2.92
PLXNB3-204ENST00000455214 KDM5BQ9UGL1 1544 aa33.29■■■□□ 2.92
PLXNB3-204ENST00000455214 ZCCHC11Q5TAX3 1644 aaKnown RBP33.28■■■□□ 2.92
PLXNB3-204ENST00000455214 EPRSP07814 1512 aaKnown RBP33.18■■■□□ 2.9
PLXNB3-204ENST00000455214 ATP10BO94823 1461 aa33.18■■■□□ 2.9
PLXNB3-204ENST00000455214 MAPKBP1O60336 1514 aa33.15■■■□□ 2.9
PLXNB3-204ENST00000455214 CDK13Q14004 1512 aaKnown RBP33.15■■■□□ 2.9
PLXNB3-204ENST00000455214 CCDC18Q5T9S5 1454 aa33.15■■■□□ 2.9
PLXNB3-204ENST00000455214 CFAP43Q8NDM7 1665 aa33.13■■■□□ 2.89
PLXNB3-204ENST00000455214 NPM1P06748 294 aaKnown RBP eCLIP33.04■■■□□ 2.88
PLXNB3-204ENST00000455214 TIAM1Q13009 1591 aa33.03■■■□□ 2.88
PLXNB3-204ENST00000455214 MAP3K1Q13233 1512 aa33.02■■■□□ 2.88
PLXNB3-204ENST00000455214 ARID3CA6NKF2 412 aa33.01■■■□□ 2.87
PLXNB3-204ENST00000455214 ATP1B4Q9UN42 357 aaPredicted RBP33.01■■■□□ 2.87
PLXNB3-204ENST00000455214 ASXL2Q76L83 1435 aa33■■■□□ 2.87
PLXNB3-204ENST00000455214 WDR7Q9Y4E6 1490 aa32.98■■■□□ 2.87
PLXNB3-204ENST00000455214 MAGI3Q5TCQ9 1506 aa32.95■■■□□ 2.87
PLXNB3-204ENST00000455214 DIP2BQ9P265 1576 aa32.9■■■□□ 2.86
PLXNB3-204ENST00000455214 KIF13AQ9H1H9 1805 aa32.88■■■□□ 2.85
PLXNB3-204ENST00000455214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.88■■■□□ 2.85
PLXNB3-204ENST00000455214 HNRNPUL2Q1KMD3 747 aaKnown RBP32.88■■■□□ 2.85
PLXNB3-204ENST00000455214 EHBP1L1Q8N3D4 1523 aa32.87■■■□□ 2.85
PLXNB3-204ENST00000455214 TROQ12816 1431 aaPredicted RBP32.87■■■□□ 2.85
PLXNB3-204ENST00000455214 ABCC10Q5T3U5 1492 aa32.84■■■□□ 2.85
PLXNB3-204ENST00000455214 CDK11AQ9UQ88 783 aaPredicted RBP32.83■■■□□ 2.85
PLXNB3-204ENST00000455214 GLI2P10070 1586 aa32.83■■■□□ 2.85
PLXNB3-204ENST00000455214 KIF14Q15058 1648 aa32.82■■■□□ 2.84
PLXNB3-204ENST00000455214 LRRC9Q6ZRR7 1453 aa32.81■■■□□ 2.84
PLXNB3-204ENST00000455214 PLEKHD1A6NEE1 506 aa32.81■■■□□ 2.84
PLXNB3-204ENST00000455214 ABCA9Q8IUA7 1624 aa32.78■■■□□ 2.84
PLXNB3-204ENST00000455214 MTUS2Q5JR59 1369 aa32.76■■■□□ 2.83
PLXNB3-204ENST00000455214 SUPT6HQ7KZ85 1726 aaKnown RBP32.74■■■□□ 2.83
PLXNB3-204ENST00000455214 APLP2Q06481 763 aa32.74■■■□□ 2.83
PLXNB3-204ENST00000455214 TTC37Q6PGP7 1564 aa32.74■■■□□ 2.83
PLXNB3-204ENST00000455214 MAP3K4Q9Y6R4 1608 aa32.73■■■□□ 2.83
PLXNB3-204ENST00000455214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.73■■■□□ 2.83
PLXNB3-204ENST00000455214 KANK4Q5T7N3 995 aaPredicted RBP32.68■■■□□ 2.82
PLXNB3-204ENST00000455214 KCNH8Q96L42 1107 aa32.65■■■□□ 2.82
PLXNB3-204ENST00000455214 MYO5CQ9NQX4 1742 aa32.65■■■□□ 2.82
PLXNB3-204ENST00000455214 CDC42BPAQ5VT25 1732 aa32.63■■■□□ 2.81
PLXNB3-204ENST00000455214 PPRC1Q5VV67 1664 aaKnown RBP32.62■■■□□ 2.81
PLXNB3-204ENST00000455214 NCOA2Q15596 1464 aa32.61■■■□□ 2.81
PLXNB3-204ENST00000455214 FAM69CQ0P6D2 419 aa32.6■■■□□ 2.81
PLXNB3-204ENST00000455214 PREX2Q70Z35 1606 aa32.59■■■□□ 2.81
PLXNB3-204ENST00000455214 ITSN2Q9NZM3 1697 aa32.58■■■□□ 2.81
PLXNB3-204ENST00000455214 TSPOAP1O95153 1857 aa32.58■■■□□ 2.81
PLXNB3-204ENST00000455214 CDC42BPBQ9Y5S2 1711 aa32.56■■■□□ 2.8
PLXNB3-204ENST00000455214 ARAP3Q8WWN8 1544 aa32.56■■■□□ 2.8
PLXNB3-204ENST00000455214 CD109Q6YHK3 1445 aa32.53■■■□□ 2.8
PLXNB3-204ENST00000455214 GPATCH8Q9UKJ3 1502 aaKnown RBP32.49■■■□□ 2.79
PLXNB3-204ENST00000455214 TRHP20396 242 aaPredicted RBP32.48■■■□□ 2.79
PLXNB3-204ENST00000455214 PLCH2O75038 1416 aa32.48■■■□□ 2.79
PLXNB3-204ENST00000455214 CFAP74Q9C0B2 1584 aa32.46■■■□□ 2.79
PLXNB3-204ENST00000455214 CCNB3Q8WWL7 1395 aa32.45■■■□□ 2.79
PLXNB3-204ENST00000455214 TEX14Q8IWB6 1497 aa32.42■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms