RNA–Protein interactions for RNA: ENST00000455076.1

TNRC18-208, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 577 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-208ENST00000455076 KIAA0586Q9BVV6 1533 aa34.87■■■■□ 3.17
TNRC18-208ENST00000455076 JPH4Q96JJ6 628 aa34.81■■■■□ 3.16
TNRC18-208ENST00000455076 PRG4Q92954 1404 aaPredicted RBP34.81■■■■□ 3.16
TNRC18-208ENST00000455076 RAPGEF2Q9Y4G8 1499 aa34.72■■■■□ 3.15
TNRC18-208ENST00000455076 IQGAP2Q13576 1575 aa34.63■■■■□ 3.13
TNRC18-208ENST00000455076 PRXQ9BXM0 1461 aa34.59■■■■□ 3.13
TNRC18-208ENST00000455076 UGGT2Q9NYU1 1516 aa34.48■■■■□ 3.11
TNRC18-208ENST00000455076 EEA1Q15075 1411 aa34.47■■■■□ 3.11
TNRC18-208ENST00000455076 CARMIL2Q6F5E8 1435 aa34.46■■■■□ 3.11
TNRC18-208ENST00000455076 CTTNBP2Q8WZ74 1663 aa34.45■■■■□ 3.11
TNRC18-208ENST00000455076 DISP1Q96F81 1524 aa34.42■■■■□ 3.1
TNRC18-208ENST00000455076 TRHP20396 242 aaPredicted RBP34.4■■■■□ 3.1
TNRC18-208ENST00000455076 ADCY10Q96PN6 1610 aa34.39■■■■□ 3.1
TNRC18-208ENST00000455076 TNIKQ9UKE5 1360 aa34.38■■■■□ 3.09
TNRC18-208ENST00000455076 CSRNP3Q8WYN3 585 aa34.35■■■■□ 3.09
TNRC18-208ENST00000455076 PTPRGP23470 1445 aa34.34■■■■□ 3.09
TNRC18-208ENST00000455076 KIAA0556O60303 1618 aa34.33■■■■□ 3.09
TNRC18-208ENST00000455076 MAPKBP1O60336 1514 aa34.29■■■■□ 3.08
TNRC18-208ENST00000455076 CHIC1Q5VXU3 224 aa34.28■■■■□ 3.08
TNRC18-208ENST00000455076 UHRF1BP1LA0JNW5 1464 aa34.22■■■■□ 3.07
TNRC18-208ENST00000455076 GOLGA3Q08378 1498 aa34.21■■■■□ 3.07
TNRC18-208ENST00000455076 KIF13AQ9H1H9 1805 aa34.16■■■■□ 3.06
TNRC18-208ENST00000455076 KIF21BO75037 1637 aa34.15■■■■□ 3.06
TNRC18-208ENST00000455076 ABCC2Q92887 1545 aa34.15■■■■□ 3.06
TNRC18-208ENST00000455076 NPM1P06748 294 aaKnown RBP eCLIP34.15■■■■□ 3.06
TNRC18-208ENST00000455076 UACAQ9BZF9 1416 aa34.14■■■■□ 3.06
TNRC18-208ENST00000455076 ABCC10Q5T3U5 1492 aa34.12■■■■□ 3.05
TNRC18-208ENST00000455076 DIP2BQ9P265 1576 aa34.06■■■■□ 3.04
TNRC18-208ENST00000455076 SAMD9Q5K651 1589 aa34.04■■■■□ 3.04
TNRC18-208ENST00000455076 KDM5BQ9UGL1 1544 aa34.04■■■■□ 3.04
TNRC18-208ENST00000455076 TTBK1Q5TCY1 1321 aaPredicted RBP34.03■■■■□ 3.04
TNRC18-208ENST00000455076 FAM9AQ8IZU1 332 aaPredicted RBP33.99■■■■□ 3.03
TNRC18-208ENST00000455076 ABCA8O94911 1581 aa33.98■■■■□ 3.03
TNRC18-208ENST00000455076 PLB1Q6P1J6 1458 aa33.94■■■■□ 3.02
TNRC18-208ENST00000455076 ASXL2Q76L83 1435 aa33.92■■■■□ 3.02
TNRC18-208ENST00000455076 ZCCHC11Q5TAX3 1644 aaKnown RBP33.92■■■■□ 3.02
TNRC18-208ENST00000455076 FAM69CQ0P6D2 419 aa33.9■■■■□ 3.02
TNRC18-208ENST00000455076 GLI2P10070 1586 aa33.85■■■■□ 3.01
TNRC18-208ENST00000455076 EFCAB5A4FU69 1503 aa33.82■■■■□ 3
TNRC18-208ENST00000455076 EPRSP07814 1512 aaKnown RBP33.76■■■■□ 3
TNRC18-208ENST00000455076 WDR7Q9Y4E6 1490 aa33.74■■■□□ 2.99
TNRC18-208ENST00000455076 P3H3Q8IVL6 736 aa33.73■■■□□ 2.99
TNRC18-208ENST00000455076 RAPGEF6Q8TEU7 1601 aa33.71■■■□□ 2.99
TNRC18-208ENST00000455076 FHOD3Q2V2M9 1422 aa33.7■■■□□ 2.98
TNRC18-208ENST00000455076 MAP3K4Q9Y6R4 1608 aa33.67■■■□□ 2.98
TNRC18-208ENST00000455076 PPRC1Q5VV67 1664 aaKnown RBP33.66■■■□□ 2.98
TNRC18-208ENST00000455076 TSPOAP1O95153 1857 aa33.65■■■□□ 2.98
TNRC18-208ENST00000455076 ATP10BO94823 1461 aa33.63■■■□□ 2.97
TNRC18-208ENST00000455076 UBTFP17480 764 aaKnown RBP33.62■■■□□ 2.97
TNRC18-208ENST00000455076 NUP153P49790 1475 aaKnown RBP33.59■■■□□ 2.97
TNRC18-208ENST00000455076 RANGAP1P46060 587 aaPredicted RBP33.55■■■□□ 2.96
TNRC18-208ENST00000455076 ARHGAP35Q9NRY4 1499 aa33.55■■■□□ 2.96
TNRC18-208ENST00000455076 KDM6BO15054 1643 aa33.54■■■□□ 2.96
TNRC18-208ENST00000455076 CFAP43Q8NDM7 1665 aa33.53■■■□□ 2.96
TNRC18-208ENST00000455076 TEX14Q8IWB6 1497 aa33.5■■■□□ 2.95
TNRC18-208ENST00000455076 EHMT2Q96KQ7 1210 aa33.47■■■□□ 2.95
TNRC18-208ENST00000455076 FMN1Q68DA7 1419 aa33.45■■■□□ 2.95
TNRC18-208ENST00000455076 MAGI3Q5TCQ9 1506 aa33.45■■■□□ 2.95
TNRC18-208ENST00000455076 ABCA9Q8IUA7 1624 aa33.4■■■□□ 2.94
TNRC18-208ENST00000455076 CD109Q6YHK3 1445 aa33.4■■■□□ 2.94
TNRC18-208ENST00000455076 ARID3CA6NKF2 412 aa33.4■■■□□ 2.94
TNRC18-208ENST00000455076 KCNH8Q96L42 1107 aa33.36■■■□□ 2.93
TNRC18-208ENST00000455076 HECW1Q76N89 1606 aa33.35■■■□□ 2.93
TNRC18-208ENST00000455076 COL17A1Q9UMD9 1497 aaPredicted RBP33.31■■■□□ 2.92
TNRC18-208ENST00000455076 CDK13Q14004 1512 aaKnown RBP33.27■■■□□ 2.92
TNRC18-208ENST00000455076 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.26■■■□□ 2.91
TNRC18-208ENST00000455076 HNRNPUL2Q1KMD3 747 aaKnown RBP33.26■■■□□ 2.91
TNRC18-208ENST00000455076 PLEKHD1A6NEE1 506 aa33.23■■■□□ 2.91
TNRC18-208ENST00000455076 CLIP1P30622 1438 aa33.2■■■□□ 2.91
TNRC18-208ENST00000455076 PHLDB1Q86UU1 1377 aa33.17■■■□□ 2.9
TNRC18-208ENST00000455076 CASKIN1Q8WXD9 1431 aa33.17■■■□□ 2.9
TNRC18-208ENST00000455076 ARAP3Q8WWN8 1544 aa33.17■■■□□ 2.9
TNRC18-208ENST00000455076 PCF11O94913 1555 aaKnown RBP33.16■■■□□ 2.9
TNRC18-208ENST00000455076 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.15■■■□□ 2.9
TNRC18-208ENST00000455076 NEO1Q92859 1461 aa33.15■■■□□ 2.9
TNRC18-208ENST00000455076 LRRIQ1Q96JM4 1722 aa33.15■■■□□ 2.9
TNRC18-208ENST00000455076 TTC37Q6PGP7 1564 aa33.1■■■□□ 2.89
TNRC18-208ENST00000455076 FYCO1Q9BQS8 1478 aa33.1■■■□□ 2.89
TNRC18-208ENST00000455076 CCDC18Q5T9S5 1454 aa33.09■■■□□ 2.89
TNRC18-208ENST00000455076 CDK11AQ9UQ88 783 aaPredicted RBP33.05■■■□□ 2.88
TNRC18-208ENST00000455076 TROQ12816 1431 aaPredicted RBP33.04■■■□□ 2.88
TNRC18-208ENST00000455076 CFAP74Q9C0B2 1584 aa33.03■■■□□ 2.88
TNRC18-208ENST00000455076 ATP1B4Q9UN42 357 aaPredicted RBP33.02■■■□□ 2.88
TNRC18-208ENST00000455076 CEP162Q5TB80 1403 aa33■■■□□ 2.87
TNRC18-208ENST00000455076 KIF14Q15058 1648 aa32.99■■■□□ 2.87
TNRC18-208ENST00000455076 FANCAO15360 1455 aa32.97■■■□□ 2.87
TNRC18-208ENST00000455076 PLCH2O75038 1416 aa32.94■■■□□ 2.86
TNRC18-208ENST00000455076 FRMPD1Q5SYB0 1578 aa32.93■■■□□ 2.86
TNRC18-208ENST00000455076 MYO5CQ9NQX4 1742 aa32.92■■■□□ 2.86
TNRC18-208ENST00000455076 AKNAQ7Z591 1439 aa32.91■■■□□ 2.86
TNRC18-208ENST00000455076 AEBP2Q6ZN18 517 aaPredicted RBP32.87■■■□□ 2.85
TNRC18-208ENST00000455076 RICTORQ6R327 1708 aa32.87■■■□□ 2.85
TNRC18-208ENST00000455076 DENND4BO75064 1496 aaPredicted RBP32.85■■■□□ 2.85
TNRC18-208ENST00000455076 KDM4FA0A1W2PPD8 638 aa32.84■■■□□ 2.85
TNRC18-208ENST00000455076 RAPGEF3O95398 923 aa32.8■■■□□ 2.84
TNRC18-208ENST00000455076 ZMYM4Q5VZL5 1548 aa32.8■■■□□ 2.84
TNRC18-208ENST00000455076 ADGRL1O94910 1474 aa32.8■■■□□ 2.84
TNRC18-208ENST00000455076 PREX2Q70Z35 1606 aa32.77■■■□□ 2.84
TNRC18-208ENST00000455076 LOC105371045A0A1W2PR82 267 aa32.76■■■□□ 2.83
TNRC18-208ENST00000455076 CDC42BPBQ9Y5S2 1711 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms