RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 TRIM26Q12899 539 aaPredicted RBP10.7□□□□□ -0.7
ECHDC1-210ENST00000454859 AQRO60306 1485 aaKnown RBP eCLIP10.68□□□□□ -0.7
ECHDC1-210ENST00000454859 ARHGAP35Q9NRY4 1499 aa10.67□□□□□ -0.7
ECHDC1-210ENST00000454859 ARAP1Q96P48 1450 aa10.67□□□□□ -0.7
ECHDC1-210ENST00000454859 SAMD9Q5K651 1589 aa10.66□□□□□ -0.7
ECHDC1-210ENST00000454859 SYNJ2O15056 1496 aa10.65□□□□□ -0.7
ECHDC1-210ENST00000454859 ZNF608Q9ULD9 1512 aaPredicted RBP10.64□□□□□ -0.71
ECHDC1-210ENST00000454859 IQGAP2Q13576 1575 aa10.64□□□□□ -0.71
ECHDC1-210ENST00000454859 KIAA0586Q9BVV6 1533 aa10.63□□□□□ -0.71
ECHDC1-210ENST00000454859 UGGT2Q9NYU1 1516 aa10.63□□□□□ -0.71
ECHDC1-210ENST00000454859 GRIN2AQ12879 1464 aa10.62□□□□□ -0.71
ECHDC1-210ENST00000454859 FMN1Q68DA7 1419 aa10.62□□□□□ -0.71
ECHDC1-210ENST00000454859 SNAPC4Q5SXM2 1469 aa10.61□□□□□ -0.71
ECHDC1-210ENST00000454859 APLP2Q06481 763 aa10.61□□□□□ -0.71
ECHDC1-210ENST00000454859 FYCO1Q9BQS8 1478 aa10.6□□□□□ -0.71
ECHDC1-210ENST00000454859 EHMT2Q96KQ7 1210 aa10.6□□□□□ -0.71
ECHDC1-210ENST00000454859 NUP160Q12769 1436 aa10.58□□□□□ -0.72
ECHDC1-210ENST00000454859 CASKIN1Q8WXD9 1431 aa10.58□□□□□ -0.72
ECHDC1-210ENST00000454859 CFAP43Q8NDM7 1665 aa10.58□□□□□ -0.72
ECHDC1-210ENST00000454859 FOXD1Q16676 465 aa10.57□□□□□ -0.72
ECHDC1-210ENST00000454859 TIAM1Q13009 1591 aa10.55□□□□□ -0.72
ECHDC1-210ENST00000454859 CCDC18Q5T9S5 1454 aa10.52□□□□□ -0.72
ECHDC1-210ENST00000454859 MSH5O43196 834 aa10.52□□□□□ -0.73
ECHDC1-210ENST00000454859 PCF11O94913 1555 aaKnown RBP10.51□□□□□ -0.73
ECHDC1-210ENST00000454859 CEP170Q5SW79 1584 aa10.51□□□□□ -0.73
ECHDC1-210ENST00000454859 KIAA0556O60303 1618 aa10.51□□□□□ -0.73
ECHDC1-210ENST00000454859 HECW1Q76N89 1606 aa10.51□□□□□ -0.73
ECHDC1-210ENST00000454859 CHMP7Q8WUX9 453 aaPredicted RBP10.51□□□□□ -0.73
ECHDC1-210ENST00000454859 PCGF6Q9BYE7 350 aa10.5□□□□□ -0.73
ECHDC1-210ENST00000454859 CARMIL2Q6F5E8 1435 aa10.5□□□□□ -0.73
ECHDC1-210ENST00000454859 CHD1O14646 1710 aa10.48□□□□□ -0.73
ECHDC1-210ENST00000454859 SHROOM2Q13796 1616 aa10.48□□□□□ -0.73
ECHDC1-210ENST00000454859 LRRC9Q6ZRR7 1453 aa10.48□□□□□ -0.73
ECHDC1-210ENST00000454859 FHOD3Q2V2M9 1422 aa10.48□□□□□ -0.73
ECHDC1-210ENST00000454859 DISP1Q96F81 1524 aa10.47□□□□□ -0.73
ECHDC1-210ENST00000454859 RRBP1Q9P2E9 1410 aaKnown RBP10.46□□□□□ -0.74
ECHDC1-210ENST00000454859 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.45□□□□□ -0.74
ECHDC1-210ENST00000454859 EHBP1L1Q8N3D4 1523 aa10.44□□□□□ -0.74
ECHDC1-210ENST00000454859 RAPGEF6Q8TEU7 1601 aa10.43□□□□□ -0.74
ECHDC1-210ENST00000454859 SUPT6HQ7KZ85 1726 aaKnown RBP10.42□□□□□ -0.74
ECHDC1-210ENST00000454859 ZEB1P37275 1124 aaPredicted RBP10.42□□□□□ -0.74
ECHDC1-210ENST00000454859 LRRIQ1Q96JM4 1722 aa10.41□□□□□ -0.74
ECHDC1-210ENST00000454859 CLASP1Q7Z460 1538 aa10.41□□□□□ -0.74
ECHDC1-210ENST00000454859 JPH4Q96JJ6 628 aa10.4□□□□□ -0.74
ECHDC1-210ENST00000454859 RANGAP1P46060 587 aaPredicted RBP10.4□□□□□ -0.74
ECHDC1-210ENST00000454859 EPRSP07814 1512 aaKnown RBP10.39□□□□□ -0.75
ECHDC1-210ENST00000454859 ARHGEF11O15085 1522 aa10.38□□□□□ -0.75
ECHDC1-210ENST00000454859 ABCA8O94911 1581 aa10.38□□□□□ -0.75
ECHDC1-210ENST00000454859 CDK11AQ9UQ88 783 aaPredicted RBP10.36□□□□□ -0.75
ECHDC1-210ENST00000454859 CCNB3Q8WWL7 1395 aa10.36□□□□□ -0.75
ECHDC1-210ENST00000454859 ADCY10Q96PN6 1610 aa10.36□□□□□ -0.75
ECHDC1-210ENST00000454859 HRCP23327 699 aa10.36□□□□□ -0.75
ECHDC1-210ENST00000454859 KANK4Q5T7N3 995 aaPredicted RBP10.35□□□□□ -0.75
ECHDC1-210ENST00000454859 ACIN1Q9UKV3 1341 aaKnown RBP10.35□□□□□ -0.75
ECHDC1-210ENST00000454859 MTUS2Q5JR59 1369 aa10.35□□□□□ -0.75
ECHDC1-210ENST00000454859 FBLN2P98095 1184 aa10.34□□□□□ -0.75
ECHDC1-210ENST00000454859 P3H3Q8IVL6 736 aa10.34□□□□□ -0.75
ECHDC1-210ENST00000454859 NUP153P49790 1475 aaKnown RBP10.34□□□□□ -0.75
ECHDC1-210ENST00000454859 PRG4Q92954 1404 aaPredicted RBP10.33□□□□□ -0.76
ECHDC1-210ENST00000454859 MIA2Q96PC5 1412 aa10.33□□□□□ -0.76
ECHDC1-210ENST00000454859 UHRF1BP1LA0JNW5 1464 aa10.32□□□□□ -0.76
ECHDC1-210ENST00000454859 ITSN2Q9NZM3 1697 aa10.31□□□□□ -0.76
ECHDC1-210ENST00000454859 MYOM3Q5VTT5 1437 aa10.31□□□□□ -0.76
ECHDC1-210ENST00000454859 NCOA2Q15596 1464 aa10.31□□□□□ -0.76
ECHDC1-210ENST00000454859 CLSPNQ9HAW4 1339 aa10.31□□□□□ -0.76
ECHDC1-210ENST00000454859 TCOF1Q13428 1488 aaKnown RBP10.31□□□□□ -0.76
ECHDC1-210ENST00000454859 PTPRGP23470 1445 aa10.3□□□□□ -0.76
ECHDC1-210ENST00000454859 TROQ12816 1431 aaPredicted RBP10.3□□□□□ -0.76
ECHDC1-210ENST00000454859 FGD6Q6ZV73 1430 aa10.3□□□□□ -0.76
ECHDC1-210ENST00000454859 PPARGC1BQ86YN6 1023 aaKnown RBP10.3□□□□□ -0.76
ECHDC1-210ENST00000454859 PHLDB1Q86UU1 1377 aa10.28□□□□□ -0.76
ECHDC1-210ENST00000454859 UACAQ9BZF9 1416 aa10.28□□□□□ -0.76
ECHDC1-210ENST00000454859 ABCC2Q92887 1545 aa10.28□□□□□ -0.76
ECHDC1-210ENST00000454859 MAGI3Q5TCQ9 1506 aa10.27□□□□□ -0.77
ECHDC1-210ENST00000454859 AKNAQ7Z591 1439 aa10.26□□□□□ -0.77
ECHDC1-210ENST00000454859 PTPN23Q9H3S7 1636 aa10.26□□□□□ -0.77
ECHDC1-210ENST00000454859 CDK13Q14004 1512 aaKnown RBP10.26□□□□□ -0.77
ECHDC1-210ENST00000454859 PLB1Q6P1J6 1458 aa10.26□□□□□ -0.77
ECHDC1-210ENST00000454859 KIF14Q15058 1648 aa10.26□□□□□ -0.77
ECHDC1-210ENST00000454859 ATP1B4Q9UN42 357 aaPredicted RBP10.25□□□□□ -0.77
ECHDC1-210ENST00000454859 ATP10BO94823 1461 aa10.24□□□□□ -0.77
ECHDC1-210ENST00000454859 KDM5BQ9UGL1 1544 aa10.22□□□□□ -0.77
ECHDC1-210ENST00000454859 PLPPR3Q6T4P5 718 aa10.22□□□□□ -0.77
ECHDC1-210ENST00000454859 OSCARQ8IYS5 282 aa10.22□□□□□ -0.77
ECHDC1-210ENST00000454859 PLEKHD1A6NEE1 506 aa10.21□□□□□ -0.77
ECHDC1-210ENST00000454859 ARAP3Q8WWN8 1544 aa10.2□□□□□ -0.78
ECHDC1-210ENST00000454859 SETD5Q9C0A6 1442 aa10.2□□□□□ -0.78
ECHDC1-210ENST00000454859 GCC2Q8IWJ2 1684 aa10.19□□□□□ -0.78
ECHDC1-210ENST00000454859 DNMT1P26358 1616 aaKnown RBP10.19□□□□□ -0.78
ECHDC1-210ENST00000454859 ABCC10Q5T3U5 1492 aa10.19□□□□□ -0.78
ECHDC1-210ENST00000454859 ROCK1Q13464 1354 aa10.19□□□□□ -0.78
ECHDC1-210ENST00000454859 CDC42BPAQ5VT25 1732 aa10.19□□□□□ -0.78
ECHDC1-210ENST00000454859 TTBK1Q5TCY1 1321 aaPredicted RBP10.18□□□□□ -0.78
ECHDC1-210ENST00000454859 HFM1A2PYH4 1435 aa10.18□□□□□ -0.78
ECHDC1-210ENST00000454859 ZCCHC11Q5TAX3 1644 aaKnown RBP10.18□□□□□ -0.78
ECHDC1-210ENST00000454859 CCER1Q8TC90 406 aaPredicted RBP10.17□□□□□ -0.78
ECHDC1-210ENST00000454859 PREX2Q70Z35 1606 aa10.17□□□□□ -0.78
ECHDC1-210ENST00000454859 GPATCH8Q9UKJ3 1502 aaKnown RBP10.17□□□□□ -0.78
ECHDC1-210ENST00000454859 ARHGEF5Q12774 1597 aa10.17□□□□□ -0.78
ECHDC1-210ENST00000454859 ADGBQ8N7X0 1667 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms