RNA–Protein interactions for RNA: ENST00000454824.5

NCL-206, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-206ENST00000454824 CUL7Q14999 1698 aa11.43□□□□□ -0.58
NCL-206ENST00000454824 CYB5RLQ6IPT4 315 aa11.43□□□□□ -0.58
NCL-206ENST00000454824 RUSC2Q8N2Y8 1516 aa11.43□□□□□ -0.58
NCL-206ENST00000454824 CSRNP3Q8WYN3 585 aa11.41□□□□□ -0.58
NCL-206ENST00000454824 ARHGEF11O15085 1522 aa11.4□□□□□ -0.58
NCL-206ENST00000454824 RIMBP3CA6NJZ7 1639 aa11.4□□□□□ -0.58
NCL-206ENST00000454824 RIMBP3BA6NNM3 1639 aa11.4□□□□□ -0.58
NCL-206ENST00000454824 RIMBP3Q9UFD9 1639 aa11.4□□□□□ -0.58
NCL-206ENST00000454824 JPH4Q96JJ6 628 aa11.4□□□□□ -0.58
NCL-206ENST00000454824 NUP160Q12769 1436 aa11.39□□□□□ -0.59
NCL-206ENST00000454824 NCBP3Q53F19 620 aaKnown RBP11.39□□□□□ -0.59
NCL-206ENST00000454824 CLASP1Q7Z460 1538 aa11.39□□□□□ -0.59
NCL-206ENST00000454824 CEP170Q5SW79 1584 aa11.38□□□□□ -0.59
NCL-206ENST00000454824 RAPGEF2Q9Y4G8 1499 aa11.38□□□□□ -0.59
NCL-206ENST00000454824 SCAF1Q9H7N4 1312 aaKnown RBP11.36□□□□□ -0.59
NCL-206ENST00000454824 EEA1Q15075 1411 aa11.35□□□□□ -0.59
NCL-206ENST00000454824 TTBK1Q5TCY1 1321 aaPredicted RBP11.35□□□□□ -0.59
NCL-206ENST00000454824 EHMT2Q96KQ7 1210 aa11.34□□□□□ -0.59
NCL-206ENST00000454824 KIAA0586Q9BVV6 1533 aa11.34□□□□□ -0.59
NCL-206ENST00000454824 PRG4Q92954 1404 aaPredicted RBP11.34□□□□□ -0.59
NCL-206ENST00000454824 ARAP1Q96P48 1450 aa11.3□□□□□ -0.6
NCL-206ENST00000454824 UBTFP17480 764 aaKnown RBP11.29□□□□□ -0.6
NCL-206ENST00000454824 RANGAP1P46060 587 aaPredicted RBP11.29□□□□□ -0.6
NCL-206ENST00000454824 CARMIL2Q6F5E8 1435 aa11.28□□□□□ -0.6
NCL-206ENST00000454824 PRXQ9BXM0 1461 aa11.28□□□□□ -0.6
NCL-206ENST00000454824 MAPK8IP2Q13387 824 aaPredicted RBP11.28□□□□□ -0.6
NCL-206ENST00000454824 CNKSR2Q8WXI2 1034 aa11.28□□□□□ -0.6
NCL-206ENST00000454824 NPM3O75607 178 aaKnown RBP11.27□□□□□ -0.61
NCL-206ENST00000454824 NPM1P06748 294 aaKnown RBP eCLIP11.27□□□□□ -0.613e-10■■■■□ 19.7
NCL-206ENST00000454824 IQGAP2Q13576 1575 aa11.27□□□□□ -0.61
NCL-206ENST00000454824 SHROOM2Q13796 1616 aa11.27□□□□□ -0.61
NCL-206ENST00000454824 ERCC6L2Q5T890 1561 aa11.26□□□□□ -0.61
NCL-206ENST00000454824 TRHP20396 242 aaPredicted RBP11.26□□□□□ -0.61
NCL-206ENST00000454824 PTPRGP23470 1445 aa11.23□□□□□ -0.61
NCL-206ENST00000454824 P3H3Q8IVL6 736 aa11.22□□□□□ -0.61
NCL-206ENST00000454824 CTTNBP2Q8WZ74 1663 aa11.22□□□□□ -0.61
NCL-206ENST00000454824 TNIKQ9UKE5 1360 aa11.21□□□□□ -0.61
NCL-206ENST00000454824 GOLGA3Q08378 1498 aa11.2□□□□□ -0.62
NCL-206ENST00000454824 KIF21BO75037 1637 aa11.18□□□□□ -0.62
NCL-206ENST00000454824 UGGT2Q9NYU1 1516 aa11.18□□□□□ -0.62
NCL-206ENST00000454824 SLC4A1APQ9BWU0 796 aaKnown RBP11.16□□□□□ -0.62
NCL-206ENST00000454824 DISP1Q96F81 1524 aa11.15□□□□□ -0.62
NCL-206ENST00000454824 KIAA0556O60303 1618 aa11.13□□□□□ -0.63
NCL-206ENST00000454824 UACAQ9BZF9 1416 aa11.11□□□□□ -0.63
NCL-206ENST00000454824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.11□□□□□ -0.63
NCL-206ENST00000454824 HNRNPUL2Q1KMD3 747 aaKnown RBP11.11□□□□□ -0.63
NCL-206ENST00000454824 ATP1B4Q9UN42 357 aaPredicted RBP11.11□□□□□ -0.63
NCL-206ENST00000454824 ARID3CA6NKF2 412 aa11.09□□□□□ -0.63
NCL-206ENST00000454824 ADCY10Q96PN6 1610 aa11.09□□□□□ -0.63
NCL-206ENST00000454824 FAM69CQ0P6D2 419 aa11.08□□□□□ -0.64
NCL-206ENST00000454824 FHOD3Q2V2M9 1422 aa11.07□□□□□ -0.64
NCL-206ENST00000454824 ABCC2Q92887 1545 aa11.06□□□□□ -0.64
NCL-206ENST00000454824 LOC105371045A0A1W2PR82 267 aa11.06□□□□□ -0.64
NCL-206ENST00000454824 UHRF1BP1LA0JNW5 1464 aa11.06□□□□□ -0.64
NCL-206ENST00000454824 PLB1Q6P1J6 1458 aa11.06□□□□□ -0.64
NCL-206ENST00000454824 EFCAB5A4FU69 1503 aa11.04□□□□□ -0.64
NCL-206ENST00000454824 SAMD9Q5K651 1589 aa11.04□□□□□ -0.64
NCL-206ENST00000454824 KCNH8Q96L42 1107 aa11.04□□□□□ -0.64
NCL-206ENST00000454824 ASXL2Q76L83 1435 aa11.01□□□□□ -0.65
NCL-206ENST00000454824 DMRT2Q9Y5R5 561 aa11.01□□□□□ -0.65
NCL-206ENST00000454824 CLIP1P30622 1438 aa11.01□□□□□ -0.65
NCL-206ENST00000454824 FMN1Q68DA7 1419 aa11.01□□□□□ -0.65
NCL-206ENST00000454824 MAPKBP1O60336 1514 aa11□□□□□ -0.65
NCL-206ENST00000454824 ABCA8O94911 1581 aa11□□□□□ -0.65
NCL-206ENST00000454824 KDM5BQ9UGL1 1544 aa10.99□□□□□ -0.65
NCL-206ENST00000454824 PLEKHD1A6NEE1 506 aa10.99□□□□□ -0.65
NCL-206ENST00000454824 RNF216Q9NWF9 866 aaPredicted RBP10.99□□□□□ -0.65
NCL-206ENST00000454824 ABCC10Q5T3U5 1492 aa10.99□□□□□ -0.65
NCL-206ENST00000454824 ARHGAP35Q9NRY4 1499 aa10.99□□□□□ -0.65
NCL-206ENST00000454824 ZCCHC11Q5TAX3 1644 aaKnown RBP10.98□□□□□ -0.65
NCL-206ENST00000454824 RAPGEF6Q8TEU7 1601 aa10.98□□□□□ -0.65
NCL-206ENST00000454824 CDK11AQ9UQ88 783 aaPredicted RBP10.97□□□□□ -0.65
NCL-206ENST00000454824 ATP10BO94823 1461 aa10.96□□□□□ -0.65
NCL-206ENST00000454824 WDR7Q9Y4E6 1490 aa10.94□□□□□ -0.66
NCL-206ENST00000454824 TSPOAP1O95153 1857 aa10.94□□□□□ -0.66
NCL-206ENST00000454824 KIF13AQ9H1H9 1805 aa10.94□□□□□ -0.66
NCL-206ENST00000454824 CEP162Q5TB80 1403 aa10.93□□□□□ -0.66
NCL-206ENST00000454824 DIP2BQ9P265 1576 aa10.93□□□□□ -0.66
NCL-206ENST00000454824 NUP153P49790 1475 aaKnown RBP10.93□□□□□ -0.66
NCL-206ENST00000454824 EPRSP07814 1512 aaKnown RBP10.92□□□□□ -0.66
NCL-206ENST00000454824 HECW1Q76N89 1606 aa10.91□□□□□ -0.66
NCL-206ENST00000454824 HOXD11P31277 338 aaPredicted RBP10.9□□□□□ -0.66
NCL-206ENST00000454824 CD109Q6YHK3 1445 aa10.89□□□□□ -0.67
NCL-206ENST00000454824 GLI2P10070 1586 aa10.88□□□□□ -0.67
NCL-206ENST00000454824 CASKIN1Q8WXD9 1431 aa10.88□□□□□ -0.67
NCL-206ENST00000454824 CDK13Q14004 1512 aaKnown RBP10.88□□□□□ -0.67
NCL-206ENST00000454824 APLP2Q06481 763 aa10.86□□□□□ -0.67
NCL-206ENST00000454824 TEX14Q8IWB6 1497 aa10.86□□□□□ -0.67
NCL-206ENST00000454824 CCDC18Q5T9S5 1454 aa10.85□□□□□ -0.67
NCL-206ENST00000454824 FYCO1Q9BQS8 1478 aa10.85□□□□□ -0.67
NCL-206ENST00000454824 PCF11O94913 1555 aaKnown RBP10.84□□□□□ -0.67
NCL-206ENST00000454824 CFAP43Q8NDM7 1665 aa10.83□□□□□ -0.68
NCL-206ENST00000454824 MAP3K4Q9Y6R4 1608 aa10.83□□□□□ -0.68
NCL-206ENST00000454824 KDM6BO15054 1643 aa10.81□□□□□ -0.68
NCL-206ENST00000454824 MTUS2Q5JR59 1369 aa10.81□□□□□ -0.68
NCL-206ENST00000454824 TROQ12816 1431 aaPredicted RBP10.81□□□□□ -0.68
NCL-206ENST00000454824 EFCAB2Q5VUJ9 269 aa10.8□□□□□ -0.68
NCL-206ENST00000454824 MAGI3Q5TCQ9 1506 aa10.79□□□□□ -0.68
NCL-206ENST00000454824 VPS8Q8N3P4 1428 aa10.79□□□□□ -0.68
NCL-206ENST00000454824 ABCA9Q8IUA7 1624 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms