RNA–Protein interactions for RNA: ENST00000454310.5

PLOD3-206, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS ALT2 TSL 5

Gene PLOD3, Length 1,098 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-206ENST00000454310 FBLN2P98095 1184 aa25.76■■□□□ 1.71
PLOD3-206ENST00000454310 CEP162Q5TB80 1403 aa25.74■■□□□ 1.71
PLOD3-206ENST00000454310 CHMP7Q8WUX9 453 aaPredicted RBP25.69■■□□□ 1.7
PLOD3-206ENST00000454310 IQGAP2Q13576 1575 aa25.67■■□□□ 1.7
PLOD3-206ENST00000454310 CLIP1P30622 1438 aa25.64■■□□□ 1.7
PLOD3-206ENST00000454310 NUP160Q12769 1436 aa25.64■■□□□ 1.7
PLOD3-206ENST00000454310 CEP170Q5SW79 1584 aa25.64■■□□□ 1.69
PLOD3-206ENST00000454310 EFCAB5A4FU69 1503 aa25.63■■□□□ 1.69
PLOD3-206ENST00000454310 KIAA0586Q9BVV6 1533 aa25.62■■□□□ 1.69
PLOD3-206ENST00000454310 RIMBP3CA6NJZ7 1639 aa25.56■■□□□ 1.68
PLOD3-206ENST00000454310 RIMBP3BA6NNM3 1639 aa25.56■■□□□ 1.68
PLOD3-206ENST00000454310 RIMBP3Q9UFD9 1639 aa25.56■■□□□ 1.68
PLOD3-206ENST00000454310 ARHGEF11O15085 1522 aa25.54■■□□□ 1.68
PLOD3-206ENST00000454310 SAMD9Q5K651 1589 aa25.54■■□□□ 1.68
PLOD3-206ENST00000454310 UGGT2Q9NYU1 1516 aa25.53■■□□□ 1.68
PLOD3-206ENST00000454310 ARHGAP35Q9NRY4 1499 aa25.5■■□□□ 1.67
PLOD3-206ENST00000454310 ARAP1Q96P48 1450 aa25.44■■□□□ 1.66
PLOD3-206ENST00000454310 CLASP1Q7Z460 1538 aa25.43■■□□□ 1.66
PLOD3-206ENST00000454310 SHROOM2Q13796 1616 aa25.43■■□□□ 1.66
PLOD3-206ENST00000454310 CYB5RLQ6IPT4 315 aa25.41■■□□□ 1.66
PLOD3-206ENST00000454310 KIAA0556O60303 1618 aa25.41■■□□□ 1.66
PLOD3-206ENST00000454310 VPS8Q8N3P4 1428 aa25.4■■□□□ 1.66
PLOD3-206ENST00000454310 RANGAP1P46060 587 aaPredicted RBP25.4■■□□□ 1.66
PLOD3-206ENST00000454310 DISP1Q96F81 1524 aa25.33■■□□□ 1.65
PLOD3-206ENST00000454310 CARMIL2Q6F5E8 1435 aa25.33■■□□□ 1.65
PLOD3-206ENST00000454310 FHOD3Q2V2M9 1422 aa25.31■■□□□ 1.64
PLOD3-206ENST00000454310 FMN1Q68DA7 1419 aa25.31■■□□□ 1.64
PLOD3-206ENST00000454310 JPH4Q96JJ6 628 aa25.29■■□□□ 1.64
PLOD3-206ENST00000454310 PCF11O94913 1555 aaKnown RBP25.22■■□□□ 1.63
PLOD3-206ENST00000454310 FYCO1Q9BQS8 1478 aa25.22■■□□□ 1.63
PLOD3-206ENST00000454310 PRG4Q92954 1404 aaPredicted RBP25.21■■□□□ 1.63
PLOD3-206ENST00000454310 P3H3Q8IVL6 736 aa25.19■■□□□ 1.62
PLOD3-206ENST00000454310 CASKIN1Q8WXD9 1431 aa25.18■■□□□ 1.62
PLOD3-206ENST00000454310 HECW1Q76N89 1606 aa25.16■■□□□ 1.62
PLOD3-206ENST00000454310 CFAP43Q8NDM7 1665 aa25.14■■□□□ 1.62
PLOD3-206ENST00000454310 MAP3K1Q13233 1512 aa25.13■■□□□ 1.61
PLOD3-206ENST00000454310 RAPGEF6Q8TEU7 1601 aa25.12■■□□□ 1.61
PLOD3-206ENST00000454310 ERCC6L2Q5T890 1561 aa25.1■■□□□ 1.61
PLOD3-206ENST00000454310 APLP2Q06481 763 aa25.09■■□□□ 1.61
PLOD3-206ENST00000454310 TIAM1Q13009 1591 aa25.07■■□□□ 1.6
PLOD3-206ENST00000454310 LRRIQ1Q96JM4 1722 aa25.06■■□□□ 1.6
PLOD3-206ENST00000454310 CCDC18Q5T9S5 1454 aa25.06■■□□□ 1.6
PLOD3-206ENST00000454310 ABCA8O94911 1581 aa25.04■■□□□ 1.6
PLOD3-206ENST00000454310 PTPRGP23470 1445 aa25.03■■□□□ 1.6
PLOD3-206ENST00000454310 TRHP20396 242 aaPredicted RBP24.99■■□□□ 1.59
PLOD3-206ENST00000454310 PLB1Q6P1J6 1458 aa24.96■■□□□ 1.59
PLOD3-206ENST00000454310 EPRSP07814 1512 aaKnown RBP24.95■■□□□ 1.58
PLOD3-206ENST00000454310 NUP153P49790 1475 aaKnown RBP24.95■■□□□ 1.58
PLOD3-206ENST00000454310 ABCC2Q92887 1545 aa24.92■■□□□ 1.58
PLOD3-206ENST00000454310 UACAQ9BZF9 1416 aa24.92■■□□□ 1.58
PLOD3-206ENST00000454310 ATP1B4Q9UN42 357 aaPredicted RBP24.91■■□□□ 1.58
PLOD3-206ENST00000454310 UHRF1BP1LA0JNW5 1464 aa24.9■■□□□ 1.58
PLOD3-206ENST00000454310 TTBK1Q5TCY1 1321 aaPredicted RBP24.89■■□□□ 1.58
PLOD3-206ENST00000454310 LRRC9Q6ZRR7 1453 aa24.89■■□□□ 1.57
PLOD3-206ENST00000454310 EHBP1L1Q8N3D4 1523 aa24.88■■□□□ 1.57
PLOD3-206ENST00000454310 CDK13Q14004 1512 aaKnown RBP24.86■■□□□ 1.57
PLOD3-206ENST00000454310 SUPT6HQ7KZ85 1726 aaKnown RBP24.82■■□□□ 1.56
PLOD3-206ENST00000454310 ADCY10Q96PN6 1610 aa24.79■■□□□ 1.56
PLOD3-206ENST00000454310 MTUS2Q5JR59 1369 aa24.79■■□□□ 1.56
PLOD3-206ENST00000454310 CDK11AQ9UQ88 783 aaPredicted RBP24.78■■□□□ 1.56
PLOD3-206ENST00000454310 ZCCHC11Q5TAX3 1644 aaKnown RBP24.77■■□□□ 1.56
PLOD3-206ENST00000454310 ATP10BO94823 1461 aa24.77■■□□□ 1.56
PLOD3-206ENST00000454310 KANK4Q5T7N3 995 aaPredicted RBP24.76■■□□□ 1.55
PLOD3-206ENST00000454310 KDM5BQ9UGL1 1544 aa24.76■■□□□ 1.55
PLOD3-206ENST00000454310 MAGI3Q5TCQ9 1506 aa24.74■■□□□ 1.55
PLOD3-206ENST00000454310 PPARGC1BQ86YN6 1023 aaKnown RBP24.73■■□□□ 1.55
PLOD3-206ENST00000454310 TROQ12816 1431 aaPredicted RBP24.7■■□□□ 1.55
PLOD3-206ENST00000454310 KIF14Q15058 1648 aa24.68■■□□□ 1.54
PLOD3-206ENST00000454310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.68■■□□□ 1.54
PLOD3-206ENST00000454310 TRIM26Q12899 539 aaPredicted RBP24.68■■□□□ 1.54
PLOD3-206ENST00000454310 HNRNPUL2Q1KMD3 747 aaKnown RBP24.68■■□□□ 1.54
PLOD3-206ENST00000454310 NCOA2Q15596 1464 aa24.65■■□□□ 1.54
PLOD3-206ENST00000454310 ARID3CA6NKF2 412 aa24.65■■□□□ 1.54
PLOD3-206ENST00000454310 NPM1P06748 294 aaKnown RBP eCLIP24.65■■□□□ 1.54
PLOD3-206ENST00000454310 ITSN2Q9NZM3 1697 aa24.62■■□□□ 1.53
PLOD3-206ENST00000454310 PLEKHD1A6NEE1 506 aa24.62■■□□□ 1.53
PLOD3-206ENST00000454310 RRBP1Q9P2E9 1410 aaKnown RBP24.58■■□□□ 1.53
PLOD3-206ENST00000454310 MYOM3Q5VTT5 1437 aa24.55■■□□□ 1.52
PLOD3-206ENST00000454310 PHLDB1Q86UU1 1377 aa24.54■■□□□ 1.52
PLOD3-206ENST00000454310 WDR7Q9Y4E6 1490 aa24.53■■□□□ 1.52
PLOD3-206ENST00000454310 MAPKBP1O60336 1514 aa24.51■■□□□ 1.51
PLOD3-206ENST00000454310 CDC42BPAQ5VT25 1732 aa24.51■■□□□ 1.51
PLOD3-206ENST00000454310 ABCC10Q5T3U5 1492 aa24.5■■□□□ 1.51
PLOD3-206ENST00000454310 MYO5CQ9NQX4 1742 aa24.49■■□□□ 1.51
PLOD3-206ENST00000454310 FAM69CQ0P6D2 419 aa24.49■■□□□ 1.51
PLOD3-206ENST00000454310 FGD6Q6ZV73 1430 aa24.49■■□□□ 1.51
PLOD3-206ENST00000454310 MIA2Q96PC5 1412 aa24.49■■□□□ 1.51
PLOD3-206ENST00000454310 CCNB3Q8WWL7 1395 aa24.48■■□□□ 1.51
PLOD3-206ENST00000454310 PREX2Q70Z35 1606 aa24.46■■□□□ 1.51
PLOD3-206ENST00000454310 PTPN23Q9H3S7 1636 aa24.46■■□□□ 1.51
PLOD3-206ENST00000454310 ASXL2Q76L83 1435 aa24.46■■□□□ 1.51
PLOD3-206ENST00000454310 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.46■■□□□ 1.51
PLOD3-206ENST00000454310 KIF13AQ9H1H9 1805 aa24.46■■□□□ 1.51
PLOD3-206ENST00000454310 TTC37Q6PGP7 1564 aa24.45■■□□□ 1.5
PLOD3-206ENST00000454310 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.45■■□□□ 1.5
PLOD3-206ENST00000454310 ABCA9Q8IUA7 1624 aa24.43■■□□□ 1.5
PLOD3-206ENST00000454310 PCGF6Q9BYE7 350 aa24.42■■□□□ 1.5
PLOD3-206ENST00000454310 TCOF1Q13428 1488 aaKnown RBP24.42■■□□□ 1.5
PLOD3-206ENST00000454310 CDC42BPBQ9Y5S2 1711 aa24.41■■□□□ 1.5
PLOD3-206ENST00000454310 GPATCH8Q9UKJ3 1502 aaKnown RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms