RNA–Protein interactions for RNA: ENST00000454132.5

LMBR1-213, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 2,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-213ENST00000454132 PEG3Q9GZU2 1588 aa27.71■■■□□ 2.03
LMBR1-213ENST00000454132 ARHGAP35Q9NRY4 1499 aa27.71■■■□□ 2.03
LMBR1-213ENST00000454132 ANP32CO43423 234 aa27.7■■■□□ 2.03
LMBR1-213ENST00000454132 CUX2O14529 1486 aa27.69■■■□□ 2.02
LMBR1-213ENST00000454132 MSH5O43196 834 aa27.68■■■□□ 2.02
LMBR1-213ENST00000454132 ERICH3Q5RHP9 1530 aa27.67■■■□□ 2.02
LMBR1-213ENST00000454132 SETD5Q9C0A6 1442 aa27.66■■■□□ 2.02
LMBR1-213ENST00000454132 PHLDB1Q86UU1 1377 aa27.6■■■□□ 2.01
LMBR1-213ENST00000454132 KIF27Q86VH2 1401 aa27.6■■■□□ 2.01
LMBR1-213ENST00000454132 CUX1P39880 1505 aa27.54■■■□□ 2
LMBR1-213ENST00000454132 HNRNPUQ00839 825 aaKnown RBP eCLIP27.53■■■□□ 2
LMBR1-213ENST00000454132 BIVM-ERCC5R4GMW8 1640 aa27.52■■■□□ 2
LMBR1-213ENST00000454132 CCER2I3L3R5 266 aa27.48■■□□□ 1.99
LMBR1-213ENST00000454132 ERICH6Q7L0X2 663 aa27.44■■□□□ 1.98
LMBR1-213ENST00000454132 TIAM1Q13009 1591 aa27.4■■□□□ 1.98
LMBR1-213ENST00000454132 LRRC9Q6ZRR7 1453 aa27.39■■□□□ 1.98
LMBR1-213ENST00000454132 CDK11AQ9UQ88 783 aaPredicted RBP27.38■■□□□ 1.97
LMBR1-213ENST00000454132 TONSLQ96HA7 1378 aa27.38■■□□□ 1.97
LMBR1-213ENST00000454132 IGF1RP08069 1367 aa27.34■■□□□ 1.97
LMBR1-213ENST00000454132 CCDC184Q52MB2 194 aa27.28■■□□□ 1.96
LMBR1-213ENST00000454132 CARMIL1Q5VZK9 1371 aa27.28■■□□□ 1.96
LMBR1-213ENST00000454132 CNGB1Q14028 1251 aaPredicted RBP27.26■■□□□ 1.95
LMBR1-213ENST00000454132 TIMELESSQ9UNS1 1208 aa27.24■■□□□ 1.95
LMBR1-213ENST00000454132 B4GALNT3Q6L9W6 998 aa27.23■■□□□ 1.95
LMBR1-213ENST00000454132 FHOD3Q2V2M9 1422 aa27.22■■□□□ 1.95
LMBR1-213ENST00000454132 FAM9BQ8IZU0 186 aa27.22■■□□□ 1.95
LMBR1-213ENST00000454132 SENP3-EIF4A1A0A087X0R7 540 aa27.2■■□□□ 1.94
LMBR1-213ENST00000454132 FANCIQ9NVI1 1328 aa27.18■■□□□ 1.94
LMBR1-213ENST00000454132 HSPA5P11021 654 aaKnown RBP27.14■■□□□ 1.94
LMBR1-213ENST00000454132 PCF11O94913 1555 aaKnown RBP27.14■■□□□ 1.94
LMBR1-213ENST00000454132 WASHC2AQ641Q2 1341 aa27.13■■□□□ 1.93
LMBR1-213ENST00000454132 CHIC2Q9UKJ5 165 aa27.12■■□□□ 1.93
LMBR1-213ENST00000454132 NBR1Q14596 966 aa27.1■■□□□ 1.93
LMBR1-213ENST00000454132 RRP7BPQ9NSQ0 103 aa27.09■■□□□ 1.93
LMBR1-213ENST00000454132 FHAD1B1AJZ9 1412 aa27.09■■□□□ 1.93
LMBR1-213ENST00000454132 PTPRKQ15262 1439 aa27.08■■□□□ 1.93
LMBR1-213ENST00000454132 CCDC18Q5T9S5 1454 aa27.08■■□□□ 1.93
LMBR1-213ENST00000454132 MAP3K1Q13233 1512 aa27.08■■□□□ 1.93
LMBR1-213ENST00000454132 CFTRP13569 1480 aa27.07■■□□□ 1.92
LMBR1-213ENST00000454132 PPP4R2Q9NY27 417 aa27.06■■□□□ 1.92
LMBR1-213ENST00000454132 AQRO60306 1485 aaKnown RBP eCLIP27.04■■□□□ 1.925e-8■■■■■ 28.3
LMBR1-213ENST00000454132 DEKP35659 375 aaKnown RBP27.03■■□□□ 1.92
LMBR1-213ENST00000454132 FOXD1Q16676 465 aa27.03■■□□□ 1.92
LMBR1-213ENST00000454132 C11orf95C9JLR9 678 aaPredicted RBP27.01■■□□□ 1.91
LMBR1-213ENST00000454132 MRS2Q9HD23 443 aa27.01■■□□□ 1.91
LMBR1-213ENST00000454132 FGD5Q6ZNL6 1462 aa26.99■■□□□ 1.91
LMBR1-213ENST00000454132 FGD6Q6ZV73 1430 aa26.98■■□□□ 1.91
LMBR1-213ENST00000454132 MTUS2Q5JR59 1369 aa26.98■■□□□ 1.91
LMBR1-213ENST00000454132 NCAPD3P42695 1498 aa26.97■■□□□ 1.91
LMBR1-213ENST00000454132 PAK3O75914 559 aaPredicted RBP26.96■■□□□ 1.91
LMBR1-213ENST00000454132 CFAP43Q8NDM7 1665 aa26.94■■□□□ 1.9
LMBR1-213ENST00000454132 UACAQ9BZF9 1416 aa26.94■■□□□ 1.9
LMBR1-213ENST00000454132 EIF4G2P78344 907 aaKnown RBP eCLIP26.93■■□□□ 1.9
LMBR1-213ENST00000454132 ARID3CA6NKF2 412 aa26.91■■□□□ 1.9
LMBR1-213ENST00000454132 POLR3GLQ9BT43 218 aa26.91■■□□□ 1.9
LMBR1-213ENST00000454132 PRKRIP1Q9H875 184 aaPredicted RBP26.89■■□□□ 1.9
LMBR1-213ENST00000454132 NAIPQ13075 1403 aa26.88■■□□□ 1.89
LMBR1-213ENST00000454132 HFM1A2PYH4 1435 aa26.86■■□□□ 1.89
LMBR1-213ENST00000454132 HMGXB3Q12766 1538 aa26.86■■□□□ 1.89
LMBR1-213ENST00000454132 RAD54L2Q9Y4B4 1467 aa26.86■■□□□ 1.89
LMBR1-213ENST00000454132 L3MBTL2Q969R5 705 aa26.86■■□□□ 1.89
LMBR1-213ENST00000454132 NOP58Q9Y2X3 529 aaKnown RBP26.84■■□□□ 1.89
LMBR1-213ENST00000454132 CASKIN1Q8WXD9 1431 aa26.84■■□□□ 1.89
LMBR1-213ENST00000454132 PTPN23Q9H3S7 1636 aa26.84■■□□□ 1.89
LMBR1-213ENST00000454132 KDM5BQ9UGL1 1544 aa26.84■■□□□ 1.89
LMBR1-213ENST00000454132 FYCO1Q9BQS8 1478 aa26.82■■□□□ 1.88
LMBR1-213ENST00000454132 CNTLNQ9NXG0 1405 aa26.78■■□□□ 1.88
LMBR1-213ENST00000454132 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.78■■□□□ 1.884e-7■■■■□ 21.6
LMBR1-213ENST00000454132 AKNAQ7Z591 1439 aa26.77■■□□□ 1.88
LMBR1-213ENST00000454132 ERICH6BQ5W0A0 696 aa26.76■■□□□ 1.87
LMBR1-213ENST00000454132 CADPSQ9ULU8 1353 aa26.75■■□□□ 1.87
LMBR1-213ENST00000454132 FMN1Q68DA7 1419 aa26.75■■□□□ 1.87
LMBR1-213ENST00000454132 ZBED9Q6R2W3 1325 aa26.74■■□□□ 1.87
LMBR1-213ENST00000454132 NBPF8Q3BBV2 869 aa26.74■■□□□ 1.87
LMBR1-213ENST00000454132 NCOA2Q15596 1464 aa26.73■■□□□ 1.87
LMBR1-213ENST00000454132 CCDC7Q96M83 1385 aa26.73■■□□□ 1.87
LMBR1-213ENST00000454132 MPHOSPH9Q99550 1183 aa26.72■■□□□ 1.87
LMBR1-213ENST00000454132 CCDC136Q96JN2 1154 aa26.72■■□□□ 1.87
LMBR1-213ENST00000454132 ZNF326Q5BKZ1 582 aaKnown RBP26.69■■□□□ 1.86
LMBR1-213ENST00000454132 MYOM3Q5VTT5 1437 aa26.68■■□□□ 1.86
LMBR1-213ENST00000454132 KIF7Q2M1P5 1343 aa26.66■■□□□ 1.86
LMBR1-213ENST00000454132 NPM2Q86SE8 214 aaKnown RBP26.66■■□□□ 1.86
LMBR1-213ENST00000454132 DENND4BO75064 1496 aaPredicted RBP26.66■■□□□ 1.86
LMBR1-213ENST00000454132 SNAPC4Q5SXM2 1469 aa26.63■■□□□ 1.85
LMBR1-213ENST00000454132 KDM6BO15054 1643 aa26.63■■□□□ 1.85
LMBR1-213ENST00000454132 ANP32AP39687 249 aaKnown RBP26.6■■□□□ 1.85
LMBR1-213ENST00000454132 NCOA1Q15788 1441 aa26.59■■□□□ 1.85
LMBR1-213ENST00000454132 MYT1LQ9UL68 1186 aa26.59■■□□□ 1.85
LMBR1-213ENST00000454132 SALL2Q9Y467 1007 aaPredicted RBP26.59■■□□□ 1.85
LMBR1-213ENST00000454132 ZBTB47Q9UFB7 747 aaPredicted RBP26.58■■□□□ 1.85
LMBR1-213ENST00000454132 EFCAB5A4FU69 1503 aa26.57■■□□□ 1.84
LMBR1-213ENST00000454132 RTN4Q9NQC3 1192 aaKnown RBP26.57■■□□□ 1.84
LMBR1-213ENST00000454132 TDRD9Q8NDG6 1382 aaKnown RBP26.56■■□□□ 1.84
LMBR1-213ENST00000454132 IPO9Q96P70 1041 aaKnown RBP26.55■■□□□ 1.84
LMBR1-213ENST00000454132 FANCD2Q9BXW9 1451 aa26.55■■□□□ 1.84
LMBR1-213ENST00000454132 RTL5Q5HYW3 569 aaPredicted RBP26.55■■□□□ 1.84
LMBR1-213ENST00000454132 LRRIQ1Q96JM4 1722 aa26.54■■□□□ 1.84
LMBR1-213ENST00000454132 ANO8Q9HCE9 1232 aaPredicted RBP26.54■■□□□ 1.84
LMBR1-213ENST00000454132 NUDCQ9Y266 331 aa26.53■■□□□ 1.84
LMBR1-213ENST00000454132 POLA1P09884 1462 aaPredicted RBP26.51■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms