RNA–Protein interactions for RNA: ENST00000453908.7

SH3D21-201, Transcript of SH3 domain containing 21, humanhuman

APPRIS P1 TSL 5

Gene SH3D21, Length 2,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-201ENST00000453908 CTTNBP2Q8WZ74 1663 aa32.55■■■□□ 2.8
SH3D21-201ENST00000453908 FHOD3Q2V2M9 1422 aa32.53■■■□□ 2.8
SH3D21-201ENST00000453908 ERCC6Q03468 1493 aa32.49■■■□□ 2.79
SH3D21-201ENST00000453908 ATP1B4Q9UN42 357 aaPredicted RBP32.48■■■□□ 2.79
SH3D21-201ENST00000453908 WDR62O43379 1518 aa32.45■■■□□ 2.79
SH3D21-201ENST00000453908 PBRM1Q86U86 1689 aa32.44■■■□□ 2.78
SH3D21-201ENST00000453908 FHAD1B1AJZ9 1412 aa32.44■■■□□ 2.78
SH3D21-201ENST00000453908 ZNF608Q9ULD9 1512 aaPredicted RBP32.42■■■□□ 2.78
SH3D21-201ENST00000453908 PCF11O94913 1555 aaKnown RBP32.42■■■□□ 2.78
SH3D21-201ENST00000453908 EFCAB5A4FU69 1503 aa32.41■■■□□ 2.78
SH3D21-201ENST00000453908 TIAM1Q13009 1591 aa32.4■■■□□ 2.78
SH3D21-201ENST00000453908 IFT140Q96RY7 1462 aa32.36■■■□□ 2.77
SH3D21-201ENST00000453908 GRIN2BQ13224 1484 aa32.32■■■□□ 2.76
SH3D21-201ENST00000453908 MAP3K1Q13233 1512 aa32.3■■■□□ 2.76
SH3D21-201ENST00000453908 ADAMTS12P58397 1594 aa32.3■■■□□ 2.76
SH3D21-201ENST00000453908 RRBP1Q9P2E9 1410 aaKnown RBP32.29■■■□□ 2.76
SH3D21-201ENST00000453908 LRRC9Q6ZRR7 1453 aa32.29■■■□□ 2.76
SH3D21-201ENST00000453908 THOC2Q8NI27 1593 aaKnown RBP32.25■■■□□ 2.75
SH3D21-201ENST00000453908 FYCO1Q9BQS8 1478 aa32.24■■■□□ 2.75
SH3D21-201ENST00000453908 SAMD9Q5K651 1589 aa32.24■■■□□ 2.75
SH3D21-201ENST00000453908 CCNB3Q8WWL7 1395 aa32.24■■■□□ 2.75
SH3D21-201ENST00000453908 CASKIN1Q8WXD9 1431 aa32.23■■■□□ 2.75
SH3D21-201ENST00000453908 FMN1Q68DA7 1419 aa32.22■■■□□ 2.75
SH3D21-201ENST00000453908 CFAP43Q8NDM7 1665 aa32.21■■■□□ 2.75
SH3D21-201ENST00000453908 ITGAEP38570 1179 aa32.2■■■□□ 2.75
SH3D21-201ENST00000453908 EIF4G3O43432 1585 aaKnown RBP32.18■■■□□ 2.74
SH3D21-201ENST00000453908 SNAPC4Q5SXM2 1469 aa32.15■■■□□ 2.74
SH3D21-201ENST00000453908 PHLDB1Q86UU1 1377 aa32.15■■■□□ 2.74
SH3D21-201ENST00000453908 IQGAP2Q13576 1575 aa32.12■■■□□ 2.73
SH3D21-201ENST00000453908 FAM50AQ14320 339 aaKnown RBP32.02■■■□□ 2.72
SH3D21-201ENST00000453908 LRRIQ1Q96JM4 1722 aa32.01■■■□□ 2.71
SH3D21-201ENST00000453908 GRIN2AQ12879 1464 aa31.99■■■□□ 2.71
SH3D21-201ENST00000453908 MTUS2Q5JR59 1369 aa31.97■■■□□ 2.71
SH3D21-201ENST00000453908 FBLN2P98095 1184 aa31.97■■■□□ 2.71
SH3D21-201ENST00000453908 CHMP7Q8WUX9 453 aaPredicted RBP31.94■■■□□ 2.7
SH3D21-201ENST00000453908 DHX57Q6P158 1386 aaKnown RBP31.91■■■□□ 2.7
SH3D21-201ENST00000453908 MAGI1Q96QZ7 1491 aaPredicted RBP31.91■■■□□ 2.7
SH3D21-201ENST00000453908 KIAA0586Q9BVV6 1533 aa31.91■■■□□ 2.7
SH3D21-201ENST00000453908 UGGT2Q9NYU1 1516 aa31.9■■■□□ 2.7
SH3D21-201ENST00000453908 ARID3CA6NKF2 412 aa31.88■■■□□ 2.69
SH3D21-201ENST00000453908 SYNJ2O15056 1496 aa31.85■■■□□ 2.69
SH3D21-201ENST00000453908 DISP1Q96F81 1524 aa31.81■■■□□ 2.68
SH3D21-201ENST00000453908 RAB3GAP2Q9H2M9 1393 aa31.8■■■□□ 2.68
SH3D21-201ENST00000453908 CEP170Q5SW79 1584 aa31.8■■■□□ 2.68
SH3D21-201ENST00000453908 HECW1Q76N89 1606 aa31.79■■■□□ 2.68
SH3D21-201ENST00000453908 MAGI3Q5TCQ9 1506 aa31.78■■■□□ 2.68
SH3D21-201ENST00000453908 KIAA0556O60303 1618 aa31.78■■■□□ 2.68
SH3D21-201ENST00000453908 NCOA2Q15596 1464 aa31.77■■■□□ 2.68
SH3D21-201ENST00000453908 FGD6Q6ZV73 1430 aa31.77■■■□□ 2.68
SH3D21-201ENST00000453908 CDK13Q14004 1512 aaKnown RBP31.76■■■□□ 2.67
SH3D21-201ENST00000453908 CCDC18Q5T9S5 1454 aa31.75■■■□□ 2.67
SH3D21-201ENST00000453908 EPRSP07814 1512 aaKnown RBP31.75■■■□□ 2.67
SH3D21-201ENST00000453908 EHBP1L1Q8N3D4 1523 aa31.74■■■□□ 2.67
SH3D21-201ENST00000453908 SUPT6HQ7KZ85 1726 aaKnown RBP31.71■■■□□ 2.67
SH3D21-201ENST00000453908 SETD5Q9C0A6 1442 aa31.71■■■□□ 2.67
SH3D21-201ENST00000453908 CLSPNQ9HAW4 1339 aa31.69■■■□□ 2.66
SH3D21-201ENST00000453908 MYOM3Q5VTT5 1437 aa31.66■■■□□ 2.66
SH3D21-201ENST00000453908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.65■■■□□ 2.665e-6■■■■■ 46.2
SH3D21-201ENST00000453908 NUP160Q12769 1436 aa31.64■■■□□ 2.66
SH3D21-201ENST00000453908 JPH4Q96JJ6 628 aa31.62■■■□□ 2.65
SH3D21-201ENST00000453908 ZNF316A6NFI3 1004 aaPredicted RBP31.59■■■□□ 2.65
SH3D21-201ENST00000453908 ARHGEF11O15085 1522 aa31.58■■■□□ 2.65
SH3D21-201ENST00000453908 NUP153P49790 1475 aaKnown RBP31.57■■■□□ 2.64
SH3D21-201ENST00000453908 DIEXFQ68CQ4 756 aaKnown RBP31.57■■■□□ 2.64
SH3D21-201ENST00000453908 RAPGEF6Q8TEU7 1601 aa31.56■■■□□ 2.64
SH3D21-201ENST00000453908 PTPRKQ15262 1439 aa31.56■■■□□ 2.64
SH3D21-201ENST00000453908 PLB1Q6P1J6 1458 aa31.52■■■□□ 2.64
SH3D21-201ENST00000453908 PTPN23Q9H3S7 1636 aa31.52■■■□□ 2.64
SH3D21-201ENST00000453908 CARMIL2Q6F5E8 1435 aa31.5■■■□□ 2.63
SH3D21-201ENST00000453908 MAPKBP1O60336 1514 aa31.5■■■□□ 2.63
SH3D21-201ENST00000453908 CHIC2Q9UKJ5 165 aa31.39■■■□□ 2.62
SH3D21-201ENST00000453908 CDK11AQ9UQ88 783 aaPredicted RBP31.38■■■□□ 2.61
SH3D21-201ENST00000453908 HFM1A2PYH4 1435 aa31.38■■■□□ 2.61
SH3D21-201ENST00000453908 CHD1O14646 1710 aa31.37■■■□□ 2.61
SH3D21-201ENST00000453908 TCOF1Q13428 1488 aaKnown RBP31.36■■■□□ 2.61
SH3D21-201ENST00000453908 PRG4Q92954 1404 aaPredicted RBP31.36■■■□□ 2.61
SH3D21-201ENST00000453908 SIN3AQ96ST3 1273 aa31.35■■■□□ 2.61
SH3D21-201ENST00000453908 RRP7BPQ9NSQ0 103 aa31.34■■■□□ 2.61
SH3D21-201ENST00000453908 NAIPQ13075 1403 aa31.34■■■□□ 2.61
SH3D21-201ENST00000453908 MIA2Q96PC5 1412 aa31.33■■■□□ 2.61
SH3D21-201ENST00000453908 NEUROD1Q13562 356 aa31.32■■■□□ 2.6
SH3D21-201ENST00000453908 TROQ12816 1431 aaPredicted RBP31.28■■■□□ 2.6
SH3D21-201ENST00000453908 ZNF644Q9H582 1327 aaPredicted RBP31.28■■■□□ 2.6
SH3D21-201ENST00000453908 ABCA8O94911 1581 aa31.23■■■□□ 2.59
SH3D21-201ENST00000453908 KIF14Q15058 1648 aa31.21■■■□□ 2.59
SH3D21-201ENST00000453908 PTPRGP23470 1445 aa31.19■■■□□ 2.58
SH3D21-201ENST00000453908 UACAQ9BZF9 1416 aa31.19■■■□□ 2.58
SH3D21-201ENST00000453908 ATP10BO94823 1461 aa31.17■■■□□ 2.58
SH3D21-201ENST00000453908 PLEKHD1A6NEE1 506 aa31.14■■■□□ 2.58
SH3D21-201ENST00000453908 CFDP1Q9UEE9 299 aaPredicted RBP31.14■■■□□ 2.58
SH3D21-201ENST00000453908 DAPK1P53355 1430 aa31.13■■■□□ 2.57
SH3D21-201ENST00000453908 ZNF777Q9ULD5 760 aaPredicted RBP31.13■■■□□ 2.57
SH3D21-201ENST00000453908 KDM6BO15054 1643 aa31.11■■■□□ 2.57
SH3D21-201ENST00000453908 GPATCH8Q9UKJ3 1502 aaKnown RBP31.1■■■□□ 2.57
SH3D21-201ENST00000453908 GCC2Q8IWJ2 1684 aa31.1■■■□□ 2.57
SH3D21-201ENST00000453908 ABCC5O15440 1437 aa31.1■■■□□ 2.57
SH3D21-201ENST00000453908 TRIM52Q96A61 297 aa31.08■■■□□ 2.57
SH3D21-201ENST00000453908 ADCY10Q96PN6 1610 aa31.08■■■□□ 2.57
SH3D21-201ENST00000453908 ERCC6L2Q5T890 1561 aa31.07■■■□□ 2.57
SH3D21-201ENST00000453908 DNMT1P26358 1616 aaKnown RBP31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms