RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 ERCC6L2Q5T890 1561 aa29.34■■■□□ 2.29
TNFRSF4-202ENST00000453580 PRG4Q92954 1404 aaPredicted RBP29.32■■■□□ 2.28
TNFRSF4-202ENST00000453580 KIAA0586Q9BVV6 1533 aa29.28■■■□□ 2.28
TNFRSF4-202ENST00000453580 CARMIL1Q5VZK9 1371 aa29.26■■■□□ 2.28
TNFRSF4-202ENST00000453580 NPM1P06748 294 aaKnown RBP eCLIP29.07■■■□□ 2.24
TNFRSF4-202ENST00000453580 RAPGEF2Q9Y4G8 1499 aa29.06■■■□□ 2.24
TNFRSF4-202ENST00000453580 CARMIL2Q6F5E8 1435 aa29.06■■■□□ 2.24
TNFRSF4-202ENST00000453580 IQGAP2Q13576 1575 aa29.04■■■□□ 2.24
TNFRSF4-202ENST00000453580 PTPRGP23470 1445 aa28.94■■■□□ 2.22
TNFRSF4-202ENST00000453580 TNIKQ9UKE5 1360 aa28.93■■■□□ 2.22
TNFRSF4-202ENST00000453580 ADCY10Q96PN6 1610 aa28.91■■■□□ 2.22
TNFRSF4-202ENST00000453580 MAPKBP1O60336 1514 aa28.9■■■□□ 2.22
TNFRSF4-202ENST00000453580 UGGT2Q9NYU1 1516 aa28.85■■■□□ 2.21
TNFRSF4-202ENST00000453580 KIF13AQ9H1H9 1805 aa28.85■■■□□ 2.21
TNFRSF4-202ENST00000453580 CTTNBP2Q8WZ74 1663 aa28.83■■■□□ 2.21
TNFRSF4-202ENST00000453580 ABCC10Q5T3U5 1492 aa28.81■■■□□ 2.2
TNFRSF4-202ENST00000453580 DISP1Q96F81 1524 aa28.79■■■□□ 2.2
TNFRSF4-202ENST00000453580 PRXQ9BXM0 1461 aa28.78■■■□□ 2.2
TNFRSF4-202ENST00000453580 TTBK1Q5TCY1 1321 aaPredicted RBP28.76■■■□□ 2.19
TNFRSF4-202ENST00000453580 FAM69CQ0P6D2 419 aa28.76■■■□□ 2.19
TNFRSF4-202ENST00000453580 UHRF1BP1LA0JNW5 1464 aa28.75■■■□□ 2.19
TNFRSF4-202ENST00000453580 GOLGA3Q08378 1498 aa28.75■■■□□ 2.19
TNFRSF4-202ENST00000453580 ABCC2Q92887 1545 aa28.74■■■□□ 2.19
TNFRSF4-202ENST00000453580 KIAA0556O60303 1618 aa28.74■■■□□ 2.19
TNFRSF4-202ENST00000453580 UACAQ9BZF9 1416 aa28.73■■■□□ 2.19
TNFRSF4-202ENST00000453580 DIP2BQ9P265 1576 aa28.72■■■□□ 2.19
TNFRSF4-202ENST00000453580 EEA1Q15075 1411 aa28.72■■■□□ 2.19
TNFRSF4-202ENST00000453580 FAM9AQ8IZU1 332 aaPredicted RBP28.68■■■□□ 2.18
TNFRSF4-202ENST00000453580 CSRNP3Q8WYN3 585 aa28.68■■■□□ 2.18
TNFRSF4-202ENST00000453580 PLB1Q6P1J6 1458 aa28.66■■■□□ 2.18
TNFRSF4-202ENST00000453580 KDM5BQ9UGL1 1544 aa28.59■■■□□ 2.17
TNFRSF4-202ENST00000453580 ASXL2Q76L83 1435 aa28.58■■■□□ 2.17
TNFRSF4-202ENST00000453580 GLI2P10070 1586 aa28.53■■■□□ 2.16
TNFRSF4-202ENST00000453580 TSPOAP1O95153 1857 aa28.51■■■□□ 2.15
TNFRSF4-202ENST00000453580 ZCCHC11Q5TAX3 1644 aaKnown RBP28.51■■■□□ 2.15
TNFRSF4-202ENST00000453580 KDM6BO15054 1643 aa28.44■■■□□ 2.14
TNFRSF4-202ENST00000453580 ABCA8O94911 1581 aa28.44■■■□□ 2.14
TNFRSF4-202ENST00000453580 EPRSP07814 1512 aaKnown RBP28.41■■■□□ 2.14
TNFRSF4-202ENST00000453580 AEBP2Q6ZN18 517 aaPredicted RBP28.4■■■□□ 2.14
TNFRSF4-202ENST00000453580 KIF21BO75037 1637 aa28.39■■■□□ 2.13
TNFRSF4-202ENST00000453580 WDR7Q9Y4E6 1490 aa28.39■■■□□ 2.13
TNFRSF4-202ENST00000453580 SAMD9Q5K651 1589 aa28.38■■■□□ 2.13
TNFRSF4-202ENST00000453580 TEX14Q8IWB6 1497 aa28.35■■■□□ 2.13
TNFRSF4-202ENST00000453580 MAP3K4Q9Y6R4 1608 aa28.35■■■□□ 2.13
TNFRSF4-202ENST00000453580 CHIC1Q5VXU3 224 aa28.33■■■□□ 2.13
TNFRSF4-202ENST00000453580 P3H3Q8IVL6 736 aa28.31■■■□□ 2.12
TNFRSF4-202ENST00000453580 PPRC1Q5VV67 1664 aaKnown RBP28.3■■■□□ 2.12
TNFRSF4-202ENST00000453580 CFAP43Q8NDM7 1665 aa28.25■■■□□ 2.11
TNFRSF4-202ENST00000453580 EFCAB5A4FU69 1503 aa28.24■■■□□ 2.11
TNFRSF4-202ENST00000453580 RAPGEF6Q8TEU7 1601 aa28.24■■■□□ 2.11
TNFRSF4-202ENST00000453580 KCNH8Q96L42 1107 aa28.2■■■□□ 2.1
TNFRSF4-202ENST00000453580 ATP10BO94823 1461 aa28.19■■■□□ 2.1
TNFRSF4-202ENST00000453580 CD109Q6YHK3 1445 aa28.18■■■□□ 2.1
TNFRSF4-202ENST00000453580 RANGAP1P46060 587 aaPredicted RBP28.18■■■□□ 2.1
TNFRSF4-202ENST00000453580 MAGI3Q5TCQ9 1506 aa28.17■■■□□ 2.1
TNFRSF4-202ENST00000453580 UBTFP17480 764 aaKnown RBP28.16■■■□□ 2.1
TNFRSF4-202ENST00000453580 FHOD3Q2V2M9 1422 aa28.13■■■□□ 2.09
TNFRSF4-202ENST00000453580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.13■■■□□ 2.09
TNFRSF4-202ENST00000453580 HNRNPUL2Q1KMD3 747 aaKnown RBP28.13■■■□□ 2.09
TNFRSF4-202ENST00000453580 ARID3CA6NKF2 412 aa28.1■■■□□ 2.09
TNFRSF4-202ENST00000453580 NUP153P49790 1475 aaKnown RBP28.07■■■□□ 2.08
TNFRSF4-202ENST00000453580 ABCA9Q8IUA7 1624 aa28.05■■■□□ 2.08
TNFRSF4-202ENST00000453580 PHLDB1Q86UU1 1377 aa28.03■■■□□ 2.08
TNFRSF4-202ENST00000453580 COL17A1Q9UMD9 1497 aaPredicted RBP28.02■■■□□ 2.08
TNFRSF4-202ENST00000453580 PLEKHD1A6NEE1 506 aa28.02■■■□□ 2.08
TNFRSF4-202ENST00000453580 FMN1Q68DA7 1419 aa28.01■■■□□ 2.07
TNFRSF4-202ENST00000453580 EHMT2Q96KQ7 1210 aa27.97■■■□□ 2.07
TNFRSF4-202ENST00000453580 ARAP3Q8WWN8 1544 aa27.94■■■□□ 2.06
TNFRSF4-202ENST00000453580 NEO1Q92859 1461 aa27.91■■■□□ 2.06
TNFRSF4-202ENST00000453580 ARHGAP35Q9NRY4 1499 aa27.9■■■□□ 2.06
TNFRSF4-202ENST00000453580 HECW1Q76N89 1606 aa27.9■■■□□ 2.06
TNFRSF4-202ENST00000453580 KDM4FA0A1W2PPD8 638 aa27.89■■■□□ 2.06
TNFRSF4-202ENST00000453580 CDK11AQ9UQ88 783 aaPredicted RBP27.87■■■□□ 2.05
TNFRSF4-202ENST00000453580 ATP1B4Q9UN42 357 aaPredicted RBP27.83■■■□□ 2.05
TNFRSF4-202ENST00000453580 CFAP74Q9C0B2 1584 aa27.82■■■□□ 2.04
TNFRSF4-202ENST00000453580 ADGRL1O94910 1474 aa27.82■■■□□ 2.04
TNFRSF4-202ENST00000453580 CDK13Q14004 1512 aaKnown RBP27.78■■■□□ 2.04
TNFRSF4-202ENST00000453580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.77■■■□□ 2.04
TNFRSF4-202ENST00000453580 FANCAO15360 1455 aa27.73■■■□□ 2.03
TNFRSF4-202ENST00000453580 TTC37Q6PGP7 1564 aa27.7■■■□□ 2.03
TNFRSF4-202ENST00000453580 CLIP1P30622 1438 aa27.7■■■□□ 2.03
TNFRSF4-202ENST00000453580 AKNAQ7Z591 1439 aa27.69■■■□□ 2.02
TNFRSF4-202ENST00000453580 DENND4BO75064 1496 aaPredicted RBP27.69■■■□□ 2.02
TNFRSF4-202ENST00000453580 RAPGEF3O95398 923 aa27.68■■■□□ 2.02
TNFRSF4-202ENST00000453580 CCDC18Q5T9S5 1454 aa27.68■■■□□ 2.02
TNFRSF4-202ENST00000453580 CASKIN1Q8WXD9 1431 aa27.67■■■□□ 2.02
TNFRSF4-202ENST00000453580 KIF14Q15058 1648 aa27.66■■■□□ 2.02
TNFRSF4-202ENST00000453580 PLCH2O75038 1416 aa27.66■■■□□ 2.02
TNFRSF4-202ENST00000453580 TROQ12816 1431 aaPredicted RBP27.65■■■□□ 2.02
TNFRSF4-202ENST00000453580 MYO5CQ9NQX4 1742 aa27.64■■■□□ 2.02
TNFRSF4-202ENST00000453580 RICTORQ6R327 1708 aa27.61■■■□□ 2.01
TNFRSF4-202ENST00000453580 FRMPD1Q5SYB0 1578 aa27.61■■■□□ 2.01
TNFRSF4-202ENST00000453580 EFCAB2Q5VUJ9 269 aa27.6■■■□□ 2.01
TNFRSF4-202ENST00000453580 PCF11O94913 1555 aaKnown RBP27.6■■■□□ 2.01
TNFRSF4-202ENST00000453580 FYCO1Q9BQS8 1478 aa27.59■■■□□ 2.01
TNFRSF4-202ENST00000453580 LRRIQ1Q96JM4 1722 aa27.58■■■□□ 2.01
TNFRSF4-202ENST00000453580 MAGI2Q86UL8 1455 aa27.56■■■□□ 2
TNFRSF4-202ENST00000453580 ZMYM4Q5VZL5 1548 aa27.55■■■□□ 2
TNFRSF4-202ENST00000453580 ARHGEF40Q8TER5 1519 aa27.54■■■□□ 2
TNFRSF4-202ENST00000453580 SCAPERQ9BY12 1400 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms