RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 CHMP7Q8WUX9 453 aaPredicted RBP16.48■□□□□ 0.23
CDC42EP3-203ENST00000453555 SYNJ2O15056 1496 aa16.46■□□□□ 0.23
CDC42EP3-203ENST00000453555 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
CDC42EP3-203ENST00000453555 ARHGEF11O15085 1522 aa16.44■□□□□ 0.22
CDC42EP3-203ENST00000453555 CLASP1Q7Z460 1538 aa16.4■□□□□ 0.22
CDC42EP3-203ENST00000453555 ADAMTS12P58397 1594 aa16.39■□□□□ 0.21
CDC42EP3-203ENST00000453555 ERICH3Q5RHP9 1530 aa16.36■□□□□ 0.21
CDC42EP3-203ENST00000453555 GRIN2AQ12879 1464 aa16.35■□□□□ 0.21
CDC42EP3-203ENST00000453555 FHAD1B1AJZ9 1412 aa16.33■□□□□ 0.2
CDC42EP3-203ENST00000453555 CYB5RLQ6IPT4 315 aa16.31■□□□□ 0.2
CDC42EP3-203ENST00000453555 CEP170Q5SW79 1584 aa16.3■□□□□ 0.2
CDC42EP3-203ENST00000453555 ARAP1Q96P48 1450 aa16.29■□□□□ 0.2
CDC42EP3-203ENST00000453555 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.2
CDC42EP3-203ENST00000453555 KIF27Q86VH2 1401 aa16.27■□□□□ 0.19
CDC42EP3-203ENST00000453555 NUP160Q12769 1436 aa16.25■□□□□ 0.19
CDC42EP3-203ENST00000453555 CUL7Q14999 1698 aa16.22■□□□□ 0.19
CDC42EP3-203ENST00000453555 IGF1RP08069 1367 aa16.22■□□□□ 0.19
CDC42EP3-203ENST00000453555 ERCC6L2Q5T890 1561 aa16.2■□□□□ 0.18
CDC42EP3-203ENST00000453555 SHROOM2Q13796 1616 aa16.19■□□□□ 0.18
CDC42EP3-203ENST00000453555 RUSC2Q8N2Y8 1516 aa16.15■□□□□ 0.18
CDC42EP3-203ENST00000453555 CARMIL1Q5VZK9 1371 aa16.13■□□□□ 0.17
CDC42EP3-203ENST00000453555 KCNA4P22459 653 aa16.11■□□□□ 0.17
CDC42EP3-203ENST00000453555 PRG4Q92954 1404 aaPredicted RBP16.11■□□□□ 0.17
CDC42EP3-203ENST00000453555 JPH4Q96JJ6 628 aa16.1■□□□□ 0.17
CDC42EP3-203ENST00000453555 KIAA0586Q9BVV6 1533 aa16.07■□□□□ 0.16
CDC42EP3-203ENST00000453555 TRHP20396 242 aaPredicted RBP16.06■□□□□ 0.16
CDC42EP3-203ENST00000453555 RNF39Q9H2S5 420 aa16.06■□□□□ 0.16
CDC42EP3-203ENST00000453555 CACNB1Q02641 598 aaPredicted RBP16.04■□□□□ 0.16
CDC42EP3-203ENST00000453555 RAPGEF2Q9Y4G8 1499 aa16.02■□□□□ 0.15
CDC42EP3-203ENST00000453555 IQGAP2Q13576 1575 aa16■□□□□ 0.15
CDC42EP3-203ENST00000453555 CTTNBP2Q8WZ74 1663 aa15.96■□□□□ 0.15
CDC42EP3-203ENST00000453555 TTBK1Q5TCY1 1321 aaPredicted RBP15.94■□□□□ 0.14
CDC42EP3-203ENST00000453555 CARMIL2Q6F5E8 1435 aa15.91■□□□□ 0.14
CDC42EP3-203ENST00000453555 PRXQ9BXM0 1461 aa15.91■□□□□ 0.14
CDC42EP3-203ENST00000453555 ADCY10Q96PN6 1610 aa15.9■□□□□ 0.14
CDC42EP3-203ENST00000453555 PTPRGP23470 1445 aa15.88■□□□□ 0.13
CDC42EP3-203ENST00000453555 CSRNP3Q8WYN3 585 aa15.88■□□□□ 0.13
CDC42EP3-203ENST00000453555 DISP1Q96F81 1524 aa15.88■□□□□ 0.13
CDC42EP3-203ENST00000453555 TNIKQ9UKE5 1360 aa15.87■□□□□ 0.13
CDC42EP3-203ENST00000453555 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
CDC42EP3-203ENST00000453555 UGGT2Q9NYU1 1516 aa15.87■□□□□ 0.13
CDC42EP3-203ENST00000453555 KIF13AQ9H1H9 1805 aa15.86■□□□□ 0.13
CDC42EP3-203ENST00000453555 NPM1P06748 294 aaKnown RBP eCLIP15.85■□□□□ 0.13
CDC42EP3-203ENST00000453555 KIAA0556O60303 1618 aa15.85■□□□□ 0.13
CDC42EP3-203ENST00000453555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.12
CDC42EP3-203ENST00000453555 EEA1Q15075 1411 aa15.83■□□□□ 0.12
CDC42EP3-203ENST00000453555 C1QBPQ07021 282 aaKnown RBP15.82■□□□□ 0.12
CDC42EP3-203ENST00000453555 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
CDC42EP3-203ENST00000453555 GOLGA3Q08378 1498 aa15.77■□□□□ 0.11
CDC42EP3-203ENST00000453555 UACAQ9BZF9 1416 aa15.77■□□□□ 0.11
CDC42EP3-203ENST00000453555 ABCC2Q92887 1545 aa15.75■□□□□ 0.11
CDC42EP3-203ENST00000453555 DIP2BQ9P265 1576 aa15.75■□□□□ 0.11
CDC42EP3-203ENST00000453555 UHRF1BP1LA0JNW5 1464 aa15.74■□□□□ 0.11
CDC42EP3-203ENST00000453555 FAM69CQ0P6D2 419 aa15.74■□□□□ 0.11
CDC42EP3-203ENST00000453555 ABCC10Q5T3U5 1492 aa15.73■□□□□ 0.11
CDC42EP3-203ENST00000453555 KIF21BO75037 1637 aa15.73■□□□□ 0.11
CDC42EP3-203ENST00000453555 P3H3Q8IVL6 736 aa15.73■□□□□ 0.11
CDC42EP3-203ENST00000453555 TSPOAP1O95153 1857 aa15.72■□□□□ 0.11
CDC42EP3-203ENST00000453555 EHMT2Q96KQ7 1210 aa15.72■□□□□ 0.11
CDC42EP3-203ENST00000453555 ZCCHC11Q5TAX3 1644 aaKnown RBP15.72■□□□□ 0.11
CDC42EP3-203ENST00000453555 RANGAP1P46060 587 aaPredicted RBP15.71■□□□□ 0.11
CDC42EP3-203ENST00000453555 PLB1Q6P1J6 1458 aa15.7■□□□□ 0.1
CDC42EP3-203ENST00000453555 SAMD9Q5K651 1589 aa15.69■□□□□ 0.1
CDC42EP3-203ENST00000453555 KDM5BQ9UGL1 1544 aa15.68■□□□□ 0.1
CDC42EP3-203ENST00000453555 ASXL2Q76L83 1435 aa15.68■□□□□ 0.1
CDC42EP3-203ENST00000453555 ABCA8O94911 1581 aa15.66■□□□□ 0.1
CDC42EP3-203ENST00000453555 UBTFP17480 764 aaKnown RBP15.62■□□□□ 0.09
CDC42EP3-203ENST00000453555 ARID3CA6NKF2 412 aa15.6■□□□□ 0.09
CDC42EP3-203ENST00000453555 GLI2P10070 1586 aa15.6■□□□□ 0.09
CDC42EP3-203ENST00000453555 FHOD3Q2V2M9 1422 aa15.6■□□□□ 0.09
CDC42EP3-203ENST00000453555 RAPGEF6Q8TEU7 1601 aa15.59■□□□□ 0.09
CDC42EP3-203ENST00000453555 EPRSP07814 1512 aaKnown RBP15.58■□□□□ 0.09
CDC42EP3-203ENST00000453555 PPRC1Q5VV67 1664 aaKnown RBP15.58■□□□□ 0.08
CDC42EP3-203ENST00000453555 WDR7Q9Y4E6 1490 aa15.57■□□□□ 0.08
CDC42EP3-203ENST00000453555 EFCAB5A4FU69 1503 aa15.56■□□□□ 0.08
CDC42EP3-203ENST00000453555 MAP3K4Q9Y6R4 1608 aa15.56■□□□□ 0.08
CDC42EP3-203ENST00000453555 KDM6BO15054 1643 aa15.55■□□□□ 0.08
CDC42EP3-203ENST00000453555 U3KPZ7 1027 aaPredicted RBP15.55■□□□□ 0.08
CDC42EP3-203ENST00000453555 KCNH8Q96L42 1107 aa15.54■□□□□ 0.08
CDC42EP3-203ENST00000453555 ATP10BO94823 1461 aa15.53■□□□□ 0.08
CDC42EP3-203ENST00000453555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
CDC42EP3-203ENST00000453555 SLC4A2P04920 1241 aa15.5■□□□□ 0.07
CDC42EP3-203ENST00000453555 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
CDC42EP3-203ENST00000453555 CFAP43Q8NDM7 1665 aa15.5■□□□□ 0.07
CDC42EP3-203ENST00000453555 NUP153P49790 1475 aaKnown RBP15.49■□□□□ 0.07
CDC42EP3-203ENST00000453555 ARHGAP35Q9NRY4 1499 aa15.48■□□□□ 0.07
CDC42EP3-203ENST00000453555 TEX14Q8IWB6 1497 aa15.46■□□□□ 0.06
CDC42EP3-203ENST00000453555 CD109Q6YHK3 1445 aa15.45■□□□□ 0.06
CDC42EP3-203ENST00000453555 ATP1B4Q9UN42 357 aaPredicted RBP15.43■□□□□ 0.06
CDC42EP3-203ENST00000453555 ABCA9Q8IUA7 1624 aa15.42■□□□□ 0.06
CDC42EP3-203ENST00000453555 CDK13Q14004 1512 aaKnown RBP15.41■□□□□ 0.06
CDC42EP3-203ENST00000453555 FMN1Q68DA7 1419 aa15.41■□□□□ 0.06
CDC42EP3-203ENST00000453555 HECW1Q76N89 1606 aa15.4■□□□□ 0.06
CDC42EP3-203ENST00000453555 MAGI3Q5TCQ9 1506 aa15.4■□□□□ 0.06
CDC42EP3-203ENST00000453555 COL17A1Q9UMD9 1497 aaPredicted RBP15.4■□□□□ 0.06
CDC42EP3-203ENST00000453555 PLEKHD1A6NEE1 506 aa15.39■□□□□ 0.05
CDC42EP3-203ENST00000453555 LRRIQ1Q96JM4 1722 aa15.39■□□□□ 0.05
CDC42EP3-203ENST00000453555 CLIP1P30622 1438 aa15.34■□□□□ 0.05
CDC42EP3-203ENST00000453555 PCF11O94913 1555 aaKnown RBP15.33■□□□□ 0.05
CDC42EP3-203ENST00000453555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms