RNA–Protein interactions for RNA: ENST00000453536.5

RFTN1-207, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 5

Gene RFTN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-207ENST00000453536 PRG4Q92954 1404 aaPredicted RBP24.44■■□□□ 1.5
RFTN1-207ENST00000453536 JPH4Q96JJ6 628 aa24.37■■□□□ 1.49
RFTN1-207ENST00000453536 CARMIL1Q5VZK9 1371 aa24.34■■□□□ 1.49
RFTN1-207ENST00000453536 KIAA0586Q9BVV6 1533 aa24.3■■□□□ 1.48
RFTN1-207ENST00000453536 ADCY10Q96PN6 1610 aa24.24■■□□□ 1.47
RFTN1-207ENST00000453536 KIF13AQ9H1H9 1805 aa24.21■■□□□ 1.47
RFTN1-207ENST00000453536 IQGAP2Q13576 1575 aa24.2■■□□□ 1.47
RFTN1-207ENST00000453536 TTBK1Q5TCY1 1321 aaPredicted RBP24.19■■□□□ 1.46
RFTN1-207ENST00000453536 RAPGEF2Q9Y4G8 1499 aa24.16■■□□□ 1.46
RFTN1-207ENST00000453536 CTTNBP2Q8WZ74 1663 aa24.11■■□□□ 1.45
RFTN1-207ENST00000453536 DISP1Q96F81 1524 aa24.1■■□□□ 1.45
RFTN1-207ENST00000453536 KIAA0556O60303 1618 aa24.03■■□□□ 1.44
RFTN1-207ENST00000453536 PTPRGP23470 1445 aa24.02■■□□□ 1.44
RFTN1-207ENST00000453536 PRXQ9BXM0 1461 aa24.02■■□□□ 1.44
RFTN1-207ENST00000453536 UGGT2Q9NYU1 1516 aa24.02■■□□□ 1.44
RFTN1-207ENST00000453536 DIP2BQ9P265 1576 aa24.01■■□□□ 1.43
RFTN1-207ENST00000453536 MAPKBP1O60336 1514 aa24■■□□□ 1.43
RFTN1-207ENST00000453536 TNIKQ9UKE5 1360 aa23.99■■□□□ 1.43
RFTN1-207ENST00000453536 CARMIL2Q6F5E8 1435 aa23.98■■□□□ 1.43
RFTN1-207ENST00000453536 TSPOAP1O95153 1857 aa23.97■■□□□ 1.43
RFTN1-207ENST00000453536 ABCC10Q5T3U5 1492 aa23.94■■□□□ 1.42
RFTN1-207ENST00000453536 ABCC2Q92887 1545 aa23.92■■□□□ 1.42
RFTN1-207ENST00000453536 FAM69CQ0P6D2 419 aa23.91■■□□□ 1.42
RFTN1-207ENST00000453536 FAM9AQ8IZU1 332 aaPredicted RBP23.9■■□□□ 1.42
RFTN1-207ENST00000453536 NPM1P06748 294 aaKnown RBP eCLIP23.89■■□□□ 1.41
RFTN1-207ENST00000453536 ZCCHC11Q5TAX3 1644 aaKnown RBP23.87■■□□□ 1.41
RFTN1-207ENST00000453536 UACAQ9BZF9 1416 aa23.86■■□□□ 1.41
RFTN1-207ENST00000453536 PLB1Q6P1J6 1458 aa23.85■■□□□ 1.41
RFTN1-207ENST00000453536 UHRF1BP1LA0JNW5 1464 aa23.84■■□□□ 1.41
RFTN1-207ENST00000453536 CSRNP3Q8WYN3 585 aa23.83■■□□□ 1.41
RFTN1-207ENST00000453536 ASXL2Q76L83 1435 aa23.83■■□□□ 1.4
RFTN1-207ENST00000453536 PPRC1Q5VV67 1664 aaKnown RBP23.81■■□□□ 1.4
RFTN1-207ENST00000453536 P3H3Q8IVL6 736 aa23.79■■□□□ 1.4
RFTN1-207ENST00000453536 KDM5BQ9UGL1 1544 aa23.78■■□□□ 1.4
RFTN1-207ENST00000453536 ABCA8O94911 1581 aa23.77■■□□□ 1.4
RFTN1-207ENST00000453536 CHIC1Q5VXU3 224 aa23.76■■□□□ 1.39
RFTN1-207ENST00000453536 EHMT2Q96KQ7 1210 aa23.76■■□□□ 1.39
RFTN1-207ENST00000453536 RANGAP1P46060 587 aaPredicted RBP23.74■■□□□ 1.39
RFTN1-207ENST00000453536 SAMD9Q5K651 1589 aa23.74■■□□□ 1.39
RFTN1-207ENST00000453536 GOLGA3Q08378 1498 aa23.73■■□□□ 1.39
RFTN1-207ENST00000453536 ARID3CA6NKF2 412 aa23.71■■□□□ 1.39
RFTN1-207ENST00000453536 KDM6BO15054 1643 aa23.7■■□□□ 1.38
RFTN1-207ENST00000453536 EPRSP07814 1512 aaKnown RBP23.69■■□□□ 1.38
RFTN1-207ENST00000453536 EEA1Q15075 1411 aa23.68■■□□□ 1.38
RFTN1-207ENST00000453536 KIF21BO75037 1637 aa23.68■■□□□ 1.38
RFTN1-207ENST00000453536 GLI2P10070 1586 aa23.68■■□□□ 1.38
RFTN1-207ENST00000453536 MAP3K4Q9Y6R4 1608 aa23.66■■□□□ 1.38
RFTN1-207ENST00000453536 FHOD3Q2V2M9 1422 aa23.61■■□□□ 1.37
RFTN1-207ENST00000453536 WDR7Q9Y4E6 1490 aa23.61■■□□□ 1.37
RFTN1-207ENST00000453536 RAPGEF6Q8TEU7 1601 aa23.58■■□□□ 1.36
RFTN1-207ENST00000453536 COL17A1Q9UMD9 1497 aaPredicted RBP23.57■■□□□ 1.36
RFTN1-207ENST00000453536 ATP10BO94823 1461 aa23.55■■□□□ 1.36
RFTN1-207ENST00000453536 KCNH8Q96L42 1107 aa23.53■■□□□ 1.36
RFTN1-207ENST00000453536 NUP153P49790 1475 aaKnown RBP23.49■■□□□ 1.35
RFTN1-207ENST00000453536 CFAP43Q8NDM7 1665 aa23.48■■□□□ 1.35
RFTN1-207ENST00000453536 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
RFTN1-207ENST00000453536 UBTFP17480 764 aaKnown RBP23.41■■□□□ 1.34
RFTN1-207ENST00000453536 AEBP2Q6ZN18 517 aaPredicted RBP23.41■■□□□ 1.34
RFTN1-207ENST00000453536 CD109Q6YHK3 1445 aa23.41■■□□□ 1.34
RFTN1-207ENST00000453536 ARHGAP35Q9NRY4 1499 aa23.39■■□□□ 1.34
RFTN1-207ENST00000453536 CDK13Q14004 1512 aaKnown RBP23.38■■□□□ 1.33
RFTN1-207ENST00000453536 TEX14Q8IWB6 1497 aa23.38■■□□□ 1.33
RFTN1-207ENST00000453536 ABCA9Q8IUA7 1624 aa23.37■■□□□ 1.33
RFTN1-207ENST00000453536 MAGI3Q5TCQ9 1506 aa23.36■■□□□ 1.33
RFTN1-207ENST00000453536 LRRIQ1Q96JM4 1722 aa23.36■■□□□ 1.33
RFTN1-207ENST00000453536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.35■■□□□ 1.33
RFTN1-207ENST00000453536 HNRNPUL2Q1KMD3 747 aaKnown RBP23.35■■□□□ 1.33
RFTN1-207ENST00000453536 KDM4FA0A1W2PPD8 638 aa23.34■■□□□ 1.33
RFTN1-207ENST00000453536 TTC37Q6PGP7 1564 aa23.29■■□□□ 1.32
RFTN1-207ENST00000453536 ADGRL1O94910 1474 aa23.24■■□□□ 1.31
RFTN1-207ENST00000453536 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.23■■□□□ 1.31
RFTN1-207ENST00000453536 HECW1Q76N89 1606 aa23.22■■□□□ 1.31
RFTN1-207ENST00000453536 FRMPD1Q5SYB0 1578 aa23.22■■□□□ 1.31
RFTN1-207ENST00000453536 ATP1B4Q9UN42 357 aaPredicted RBP23.21■■□□□ 1.31
RFTN1-207ENST00000453536 PCF11O94913 1555 aaKnown RBP23.21■■□□□ 1.31
RFTN1-207ENST00000453536 KIF14Q15058 1648 aa23.19■■□□□ 1.3
RFTN1-207ENST00000453536 ARAP3Q8WWN8 1544 aa23.17■■□□□ 1.3
RFTN1-207ENST00000453536 FMN1Q68DA7 1419 aa23.15■■□□□ 1.3
RFTN1-207ENST00000453536 RAPGEF3O95398 923 aa23.14■■□□□ 1.29
RFTN1-207ENST00000453536 PLEKHD1A6NEE1 506 aa23.13■■□□□ 1.29
RFTN1-207ENST00000453536 RICTORQ6R327 1708 aa23.11■■□□□ 1.29
RFTN1-207ENST00000453536 NEO1Q92859 1461 aa23.1■■□□□ 1.29
RFTN1-207ENST00000453536 FANCAO15360 1455 aa23.07■■□□□ 1.28
RFTN1-207ENST00000453536 SIGLEC1Q9BZZ2 1709 aa23.07■■□□□ 1.28
RFTN1-207ENST00000453536 MYO5CQ9NQX4 1742 aa23.07■■□□□ 1.28
RFTN1-207ENST00000453536 CLIP1P30622 1438 aa23.04■■□□□ 1.28
RFTN1-207ENST00000453536 AKNAQ7Z591 1439 aa23.04■■□□□ 1.28
RFTN1-207ENST00000453536 CFAP74Q9C0B2 1584 aa23.01■■□□□ 1.27
RFTN1-207ENST00000453536 CASKIN1Q8WXD9 1431 aa23.01■■□□□ 1.27
RFTN1-207ENST00000453536 TROQ12816 1431 aaPredicted RBP22.99■■□□□ 1.27
RFTN1-207ENST00000453536 CDC42BPBQ9Y5S2 1711 aa22.99■■□□□ 1.27
RFTN1-207ENST00000453536 ARHGEF40Q8TER5 1519 aa22.98■■□□□ 1.27
RFTN1-207ENST00000453536 PLCH2O75038 1416 aa22.97■■□□□ 1.27
RFTN1-207ENST00000453536 DENND4BO75064 1496 aaPredicted RBP22.97■■□□□ 1.27
RFTN1-207ENST00000453536 PHLDB1Q86UU1 1377 aa22.95■■□□□ 1.26
RFTN1-207ENST00000453536 YEATS2Q9ULM3 1422 aa22.95■■□□□ 1.26
RFTN1-207ENST00000453536 FYCO1Q9BQS8 1478 aa22.94■■□□□ 1.26
RFTN1-207ENST00000453536 CDC42BPAQ5VT25 1732 aa22.93■■□□□ 1.26
RFTN1-207ENST00000453536 ADAMTSL3P82987 1691 aa22.93■■□□□ 1.26
RFTN1-207ENST00000453536 BCORL1Q5H9F3 1711 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms