RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 KIAA0586Q9BVV6 1533 aa26.06■■□□□ 1.76
VPS8-213ENST00000453056 EEA1Q15075 1411 aa26.01■■□□□ 1.75
VPS8-213ENST00000453056 ERCC6L2Q5T890 1561 aa26■■□□□ 1.75
VPS8-213ENST00000453056 JPH4Q96JJ6 628 aa26■■□□□ 1.75
VPS8-213ENST00000453056 PRG4Q92954 1404 aaPredicted RBP25.99■■□□□ 1.75
VPS8-213ENST00000453056 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
VPS8-213ENST00000453056 IQGAP2Q13576 1575 aa25.96■■□□□ 1.75
VPS8-213ENST00000453056 PRXQ9BXM0 1461 aa25.95■■□□□ 1.74
VPS8-213ENST00000453056 CSRNP3Q8WYN3 585 aa25.89■■□□□ 1.74
VPS8-213ENST00000453056 CTTNBP2Q8WZ74 1663 aa25.89■■□□□ 1.73
VPS8-213ENST00000453056 CARMIL2Q6F5E8 1435 aa25.82■■□□□ 1.72
VPS8-213ENST00000453056 UGGT2Q9NYU1 1516 aa25.79■■□□□ 1.72
VPS8-213ENST00000453056 FAM9AQ8IZU1 332 aaPredicted RBP25.78■■□□□ 1.72
VPS8-213ENST00000453056 KIF21BO75037 1637 aa25.74■■□□□ 1.71
VPS8-213ENST00000453056 TNIKQ9UKE5 1360 aa25.71■■□□□ 1.71
VPS8-213ENST00000453056 DISP1Q96F81 1524 aa25.7■■□□□ 1.7
VPS8-213ENST00000453056 KIAA0556O60303 1618 aa25.7■■□□□ 1.7
VPS8-213ENST00000453056 PTPRGP23470 1445 aa25.69■■□□□ 1.7
VPS8-213ENST00000453056 GOLGA3Q08378 1498 aa25.68■■□□□ 1.7
VPS8-213ENST00000453056 ADCY10Q96PN6 1610 aa25.63■■□□□ 1.69
VPS8-213ENST00000453056 TTBK1Q5TCY1 1321 aaPredicted RBP25.6■■□□□ 1.69
VPS8-213ENST00000453056 TRHP20396 242 aaPredicted RBP25.59■■□□□ 1.69
VPS8-213ENST00000453056 NPM1P06748 294 aaKnown RBP eCLIP25.56■■□□□ 1.68
VPS8-213ENST00000453056 UACAQ9BZF9 1416 aa25.52■■□□□ 1.68
VPS8-213ENST00000453056 UHRF1BP1LA0JNW5 1464 aa25.51■■□□□ 1.67
VPS8-213ENST00000453056 ABCC2Q92887 1545 aa25.51■■□□□ 1.67
VPS8-213ENST00000453056 SAMD9Q5K651 1589 aa25.51■■□□□ 1.67
VPS8-213ENST00000453056 MAPKBP1O60336 1514 aa25.49■■□□□ 1.67
VPS8-213ENST00000453056 UBTFP17480 764 aaKnown RBP25.46■■□□□ 1.67
VPS8-213ENST00000453056 EFCAB5A4FU69 1503 aa25.44■■□□□ 1.66
VPS8-213ENST00000453056 EHMT2Q96KQ7 1210 aa25.43■■□□□ 1.66
VPS8-213ENST00000453056 ABCA8O94911 1581 aa25.39■■□□□ 1.66
VPS8-213ENST00000453056 RANGAP1P46060 587 aaPredicted RBP25.39■■□□□ 1.66
VPS8-213ENST00000453056 PLB1Q6P1J6 1458 aa25.39■■□□□ 1.65
VPS8-213ENST00000453056 P3H3Q8IVL6 736 aa25.38■■□□□ 1.65
VPS8-213ENST00000453056 KDM5BQ9UGL1 1544 aa25.37■■□□□ 1.65
VPS8-213ENST00000453056 KIF13AQ9H1H9 1805 aa25.37■■□□□ 1.65
VPS8-213ENST00000453056 ZCCHC11Q5TAX3 1644 aaKnown RBP25.35■■□□□ 1.65
VPS8-213ENST00000453056 ABCC10Q5T3U5 1492 aa25.34■■□□□ 1.65
VPS8-213ENST00000453056 FHOD3Q2V2M9 1422 aa25.33■■□□□ 1.65
VPS8-213ENST00000453056 DIP2BQ9P265 1576 aa25.33■■□□□ 1.65
VPS8-213ENST00000453056 ASXL2Q76L83 1435 aa25.3■■□□□ 1.64
VPS8-213ENST00000453056 RAPGEF6Q8TEU7 1601 aa25.29■■□□□ 1.64
VPS8-213ENST00000453056 FAM69CQ0P6D2 419 aa25.26■■□□□ 1.63
VPS8-213ENST00000453056 ARHGAP35Q9NRY4 1499 aa25.21■■□□□ 1.63
VPS8-213ENST00000453056 WDR7Q9Y4E6 1490 aa25.21■■□□□ 1.63
VPS8-213ENST00000453056 GLI2P10070 1586 aa25.18■■□□□ 1.62
VPS8-213ENST00000453056 FMN1Q68DA7 1419 aa25.18■■□□□ 1.62
VPS8-213ENST00000453056 EPRSP07814 1512 aaKnown RBP25.16■■□□□ 1.62
VPS8-213ENST00000453056 TSPOAP1O95153 1857 aa25.15■■□□□ 1.62
VPS8-213ENST00000453056 ATP10BO94823 1461 aa25.15■■□□□ 1.62
VPS8-213ENST00000453056 NUP153P49790 1475 aaKnown RBP25.15■■□□□ 1.62
VPS8-213ENST00000453056 ARID3CA6NKF2 412 aa25.13■■□□□ 1.61
VPS8-213ENST00000453056 CLIP1P30622 1438 aa25.1■■□□□ 1.61
VPS8-213ENST00000453056 HECW1Q76N89 1606 aa25.08■■□□□ 1.61
VPS8-213ENST00000453056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.07■■□□□ 1.6
VPS8-213ENST00000453056 HNRNPUL2Q1KMD3 747 aaKnown RBP25.07■■□□□ 1.6
VPS8-213ENST00000453056 MAP3K4Q9Y6R4 1608 aa25.07■■□□□ 1.6
VPS8-213ENST00000453056 CFAP43Q8NDM7 1665 aa25.03■■□□□ 1.6
VPS8-213ENST00000453056 PPRC1Q5VV67 1664 aaKnown RBP25.01■■□□□ 1.59
VPS8-213ENST00000453056 KCNH8Q96L42 1107 aa25.01■■□□□ 1.59
VPS8-213ENST00000453056 TEX14Q8IWB6 1497 aa25■■□□□ 1.59
VPS8-213ENST00000453056 CDK13Q14004 1512 aaKnown RBP24.98■■□□□ 1.59
VPS8-213ENST00000453056 CEP162Q5TB80 1403 aa24.97■■□□□ 1.59
VPS8-213ENST00000453056 ATP1B4Q9UN42 357 aaPredicted RBP24.97■■□□□ 1.59
VPS8-213ENST00000453056 PCF11O94913 1555 aaKnown RBP24.97■■□□□ 1.59
VPS8-213ENST00000453056 KDM6BO15054 1643 aa24.95■■□□□ 1.58
VPS8-213ENST00000453056 CD109Q6YHK3 1445 aa24.95■■□□□ 1.58
VPS8-213ENST00000453056 CASKIN1Q8WXD9 1431 aa24.95■■□□□ 1.58
VPS8-213ENST00000453056 PLEKHD1A6NEE1 506 aa24.94■■□□□ 1.58
VPS8-213ENST00000453056 ABCA9Q8IUA7 1624 aa24.94■■□□□ 1.58
VPS8-213ENST00000453056 FYCO1Q9BQS8 1478 aa24.93■■□□□ 1.58
VPS8-213ENST00000453056 MAGI3Q5TCQ9 1506 aa24.91■■□□□ 1.58
VPS8-213ENST00000453056 CCDC18Q5T9S5 1454 aa24.9■■□□□ 1.58
VPS8-213ENST00000453056 CDK11AQ9UQ88 783 aaPredicted RBP24.89■■□□□ 1.58
VPS8-213ENST00000453056 LRRIQ1Q96JM4 1722 aa24.88■■□□□ 1.57
VPS8-213ENST00000453056 LOC105371045A0A1W2PR82 267 aa24.87■■□□□ 1.57
VPS8-213ENST00000453056 TROQ12816 1431 aaPredicted RBP24.8■■□□□ 1.56
VPS8-213ENST00000453056 KIF14Q15058 1648 aa24.8■■□□□ 1.56
VPS8-213ENST00000453056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.79■■□□□ 1.56
VPS8-213ENST00000453056 TTC37Q6PGP7 1564 aa24.79■■□□□ 1.56
VPS8-213ENST00000453056 PHLDB1Q86UU1 1377 aa24.75■■□□□ 1.55
VPS8-213ENST00000453056 CFAP74Q9C0B2 1584 aa24.75■■□□□ 1.55
VPS8-213ENST00000453056 NEO1Q92859 1461 aa24.74■■□□□ 1.55
VPS8-213ENST00000453056 MYO5CQ9NQX4 1742 aa24.72■■□□□ 1.55
VPS8-213ENST00000453056 COL17A1Q9UMD9 1497 aaPredicted RBP24.7■■□□□ 1.55
VPS8-213ENST00000453056 ARAP3Q8WWN8 1544 aa24.69■■□□□ 1.54
VPS8-213ENST00000453056 VPS8Q8N3P4 1428 aa24.68■■□□□ 1.54
VPS8-213ENST00000453056 FANCAO15360 1455 aa24.67■■□□□ 1.54
VPS8-213ENST00000453056 PLCH2O75038 1416 aa24.63■■□□□ 1.53
VPS8-213ENST00000453056 MTUS2Q5JR59 1369 aa24.62■■□□□ 1.53
VPS8-213ENST00000453056 AKNAQ7Z591 1439 aa24.61■■□□□ 1.53
VPS8-213ENST00000453056 EHBP1L1Q8N3D4 1523 aa24.6■■□□□ 1.53
VPS8-213ENST00000453056 ARHGAP5Q13017 1502 aa24.59■■□□□ 1.53
VPS8-213ENST00000453056 PREX2Q70Z35 1606 aa24.58■■□□□ 1.53
VPS8-213ENST00000453056 EFCAB2Q5VUJ9 269 aa24.56■■□□□ 1.52
VPS8-213ENST00000453056 DENND4BO75064 1496 aaPredicted RBP24.56■■□□□ 1.52
VPS8-213ENST00000453056 ADGRL1O94910 1474 aa24.55■■□□□ 1.52
VPS8-213ENST00000453056 TIAM1Q13009 1591 aa24.54■■□□□ 1.52
VPS8-213ENST00000453056 CDC42BPAQ5VT25 1732 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms