RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 FHAD1B1AJZ9 1412 aa19.47■□□□□ 0.71
USP1-204ENST00000452143 SHROOM2Q13796 1616 aa19.46■□□□□ 0.71
USP1-204ENST00000452143 ERCC6L2Q5T890 1561 aa19.41■□□□□ 0.7
USP1-204ENST00000452143 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
USP1-204ENST00000452143 PRG4Q92954 1404 aaPredicted RBP19.25■□□□□ 0.67
USP1-204ENST00000452143 CUL7Q14999 1698 aa19.24■□□□□ 0.67
USP1-204ENST00000452143 KIF13AQ9H1H9 1805 aa19.2■□□□□ 0.66
USP1-204ENST00000452143 KIF27Q86VH2 1401 aa19.19■□□□□ 0.66
USP1-204ENST00000452143 JPH4Q96JJ6 628 aa19.18■□□□□ 0.66
USP1-204ENST00000452143 KIAA0586Q9BVV6 1533 aa19.15■□□□□ 0.66
USP1-204ENST00000452143 IGF1RP08069 1367 aa19.12■□□□□ 0.65
USP1-204ENST00000452143 MAPKBP1O60336 1514 aa19.11■□□□□ 0.65
USP1-204ENST00000452143 ADCY10Q96PN6 1610 aa19.1■□□□□ 0.65
USP1-204ENST00000452143 PIAS4Q8N2W9 510 aaPredicted RBP19.09■□□□□ 0.65
USP1-204ENST00000452143 ABCC10Q5T3U5 1492 aa19.06■□□□□ 0.64
USP1-204ENST00000452143 DIP2BQ9P265 1576 aa19.05■□□□□ 0.64
USP1-204ENST00000452143 NPM1P06748 294 aaKnown RBP eCLIP19.01■□□□□ 0.63
USP1-204ENST00000452143 CARMIL1Q5VZK9 1371 aa19.01■□□□□ 0.63
USP1-204ENST00000452143 IQGAP2Q13576 1575 aa19■□□□□ 0.63
USP1-204ENST00000452143 CARMIL2Q6F5E8 1435 aa18.96■□□□□ 0.63
USP1-204ENST00000452143 FAM69CQ0P6D2 419 aa18.94■□□□□ 0.62
USP1-204ENST00000452143 PTPRGP23470 1445 aa18.93■□□□□ 0.62
USP1-204ENST00000452143 TNIKQ9UKE5 1360 aa18.92■□□□□ 0.62
USP1-204ENST00000452143 ABCC2Q92887 1545 aa18.9■□□□□ 0.62
USP1-204ENST00000452143 KDM6BO15054 1643 aa18.89■□□□□ 0.61
USP1-204ENST00000452143 UHRF1BP1LA0JNW5 1464 aa18.87■□□□□ 0.61
USP1-204ENST00000452143 TSPOAP1O95153 1857 aa18.87■□□□□ 0.61
USP1-204ENST00000452143 DISP1Q96F81 1524 aa18.87■□□□□ 0.61
USP1-204ENST00000452143 RAPGEF2Q9Y4G8 1499 aa18.87■□□□□ 0.61
USP1-204ENST00000452143 UGGT2Q9NYU1 1516 aa18.86■□□□□ 0.61
USP1-204ENST00000452143 PLB1Q6P1J6 1458 aa18.83■□□□□ 0.6
USP1-204ENST00000452143 CTTNBP2Q8WZ74 1663 aa18.82■□□□□ 0.6
USP1-204ENST00000452143 KIAA0556O60303 1618 aa18.82■□□□□ 0.6
USP1-204ENST00000452143 GLI2P10070 1586 aa18.82■□□□□ 0.6
USP1-204ENST00000452143 UACAQ9BZF9 1416 aa18.82■□□□□ 0.6
USP1-204ENST00000452143 ASXL2Q76L83 1435 aa18.81■□□□□ 0.6
USP1-204ENST00000452143 PPRC1Q5VV67 1664 aaKnown RBP18.78■□□□□ 0.6
USP1-204ENST00000452143 KDM5BQ9UGL1 1544 aa18.78■□□□□ 0.6
USP1-204ENST00000452143 TTBK1Q5TCY1 1321 aaPredicted RBP18.76■□□□□ 0.59
USP1-204ENST00000452143 ZCCHC11Q5TAX3 1644 aaKnown RBP18.76■□□□□ 0.59
USP1-204ENST00000452143 MAP3K4Q9Y6R4 1608 aa18.74■□□□□ 0.59
USP1-204ENST00000452143 PLPPR3Q6T4P5 718 aa18.72■□□□□ 0.59
USP1-204ENST00000452143 EPRSP07814 1512 aaKnown RBP18.71■□□□□ 0.59
USP1-204ENST00000452143 GOLGA3Q08378 1498 aa18.71■□□□□ 0.59
USP1-204ENST00000452143 PPP6R1Q9UPN7 881 aa18.7■□□□□ 0.58
USP1-204ENST00000452143 TEX14Q8IWB6 1497 aa18.67■□□□□ 0.58
USP1-204ENST00000452143 PRXQ9BXM0 1461 aa18.67■□□□□ 0.58
USP1-204ENST00000452143 WDR7Q9Y4E6 1490 aa18.65■□□□□ 0.58
USP1-204ENST00000452143 ABCA8O94911 1581 aa18.64■□□□□ 0.57
USP1-204ENST00000452143 ADRA2BP18089 450 aa18.62■□□□□ 0.57
USP1-204ENST00000452143 CFAP43Q8NDM7 1665 aa18.6■□□□□ 0.57
USP1-204ENST00000452143 KDM4FA0A1W2PPD8 638 aa18.59■□□□□ 0.57
USP1-204ENST00000452143 COL17A1Q9UMD9 1497 aaPredicted RBP18.56■□□□□ 0.56
USP1-204ENST00000452143 MAGI3Q5TCQ9 1506 aa18.54■□□□□ 0.56
USP1-204ENST00000452143 ADGRL1O94910 1474 aa18.52■□□□□ 0.56
USP1-204ENST00000452143 SAMD9Q5K651 1589 aa18.52■□□□□ 0.56
USP1-204ENST00000452143 CD109Q6YHK3 1445 aa18.49■□□□□ 0.55
USP1-204ENST00000452143 EEA1Q15075 1411 aa18.47■□□□□ 0.55
USP1-204ENST00000452143 FAM9AQ8IZU1 332 aaPredicted RBP18.46■□□□□ 0.55
USP1-204ENST00000452143 RAPGEF6Q8TEU7 1601 aa18.44■□□□□ 0.54
USP1-204ENST00000452143 ABCA9Q8IUA7 1624 aa18.43■□□□□ 0.54
USP1-204ENST00000452143 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
USP1-204ENST00000452143 ATP10BO94823 1461 aa18.42■□□□□ 0.54
USP1-204ENST00000452143 KCNH8Q96L42 1107 aa18.4■□□□□ 0.54
USP1-204ENST00000452143 ARAP3Q8WWN8 1544 aa18.39■□□□□ 0.54
USP1-204ENST00000452143 KIF21BO75037 1637 aa18.35■□□□□ 0.53
USP1-204ENST00000452143 PHLDB1Q86UU1 1377 aa18.35■□□□□ 0.53
USP1-204ENST00000452143 P3H3Q8IVL6 736 aa18.35■□□□□ 0.53
USP1-204ENST00000452143 EFCAB5A4FU69 1503 aa18.33■□□□□ 0.53
USP1-204ENST00000452143 NUP153P49790 1475 aaKnown RBP18.33■□□□□ 0.53
USP1-204ENST00000452143 NEO1Q92859 1461 aa18.33■□□□□ 0.52
USP1-204ENST00000452143 ARID3CA6NKF2 412 aa18.31■□□□□ 0.52
USP1-204ENST00000452143 HECW2Q9P2P5 1572 aa18.3■□□□□ 0.52
USP1-204ENST00000452143 FHOD3Q2V2M9 1422 aa18.3■□□□□ 0.52
USP1-204ENST00000452143 FRMPD1Q5SYB0 1578 aa18.25■□□□□ 0.51
USP1-204ENST00000452143 CFAP74Q9C0B2 1584 aa18.25■□□□□ 0.51
USP1-204ENST00000452143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
USP1-204ENST00000452143 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
USP1-204ENST00000452143 ADAMTSL3P82987 1691 aa18.21■□□□□ 0.51
USP1-204ENST00000452143 RICTORQ6R327 1708 aa18.2■□□□□ 0.5
USP1-204ENST00000452143 ARHGEF40Q8TER5 1519 aa18.19■□□□□ 0.5
USP1-204ENST00000452143 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.18■□□□□ 0.51e-5■■■■□ 25.8
USP1-204ENST00000452143 TTC37Q6PGP7 1564 aa18.18■□□□□ 0.5
USP1-204ENST00000452143 RANGAP1P46060 587 aaPredicted RBP18.18■□□□□ 0.5
USP1-204ENST00000452143 BCORL1Q5H9F3 1711 aa18.18■□□□□ 0.5
USP1-204ENST00000452143 PLEKHD1A6NEE1 506 aa18.17■□□□□ 0.5
USP1-204ENST00000452143 FANCAO15360 1455 aa18.16■□□□□ 0.5
USP1-204ENST00000452143 RAPGEF3O95398 923 aa18.16■□□□□ 0.5
USP1-204ENST00000452143 HECW1Q76N89 1606 aa18.16■□□□□ 0.5
USP1-204ENST00000452143 DENND4BO75064 1496 aaPredicted RBP18.14■□□□□ 0.5
USP1-204ENST00000452143 ZMYM4Q5VZL5 1548 aa18.14■□□□□ 0.49
USP1-204ENST00000452143 PTPRMP28827 1452 aa18.14■□□□□ 0.49
USP1-204ENST00000452143 CDK13Q14004 1512 aaKnown RBP18.13■□□□□ 0.49
USP1-204ENST00000452143 FMN1Q68DA7 1419 aa18.13■□□□□ 0.49
USP1-204ENST00000452143 AKNAQ7Z591 1439 aa18.13■□□□□ 0.49
USP1-204ENST00000452143 MADDQ8WXG6 1647 aa18.12■□□□□ 0.49
USP1-204ENST00000452143 MYO5CQ9NQX4 1742 aa18.09■□□□□ 0.49
USP1-204ENST00000452143 ARHGAP35Q9NRY4 1499 aa18.08■□□□□ 0.49
USP1-204ENST00000452143 MAGI2Q86UL8 1455 aa18.07■□□□□ 0.48
USP1-204ENST00000452143 ZFYVE16Q7Z3T8 1539 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms