RNA–Protein interactions for RNA: ENST00000452120.6

MEG3-210, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 4,489 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-210ENST00000452120 TOP2BQ02880 1626 aa16.8■□□□□ 0.28
MEG3-210ENST00000452120 NESP48681 1621 aa16.8■□□□□ 0.28
MEG3-210ENST00000452120 CARMIL2Q6F5E8 1435 aa16.79■□□□□ 0.28
MEG3-210ENST00000452120 TONSLQ96HA7 1378 aa16.79■□□□□ 0.28
MEG3-210ENST00000452120 ZNF326Q5BKZ1 582 aaKnown RBP16.79■□□□□ 0.28
MEG3-210ENST00000452120 CCNB3Q8WWL7 1395 aa16.79■□□□□ 0.28
MEG3-210ENST00000452120 GAPVD1Q14C86 1478 aa16.79■□□□□ 0.28
MEG3-210ENST00000452120 NEFLP07196 543 aa16.78■□□□□ 0.28
MEG3-210ENST00000452120 ACIN1Q9UKV3 1341 aaKnown RBP16.77■□□□□ 0.28
MEG3-210ENST00000452120 CFDP1Q9UEE9 299 aaPredicted RBP16.76■□□□□ 0.27
MEG3-210ENST00000452120 CUX1P39880 1505 aa16.75■□□□□ 0.27
MEG3-210ENST00000452120 KANK4Q5T7N3 995 aaPredicted RBP16.74■□□□□ 0.27
MEG3-210ENST00000452120 KCNH8Q96L42 1107 aa16.73■□□□□ 0.27
MEG3-210ENST00000452120 RRP7BPQ9NSQ0 103 aa16.73■□□□□ 0.27
MEG3-210ENST00000452120 KIF21BO75037 1637 aa16.72■□□□□ 0.27
MEG3-210ENST00000452120 FHOD3Q2V2M9 1422 aa16.72■□□□□ 0.27
MEG3-210ENST00000452120 TOPBP1Q92547 1522 aa16.71■□□□□ 0.27
MEG3-210ENST00000452120 ERICH3Q5RHP9 1530 aa16.69■□□□□ 0.26
MEG3-210ENST00000452120 ARHGAP35Q9NRY4 1499 aa16.69■□□□□ 0.26
MEG3-210ENST00000452120 LAMC3Q9Y6N6 1575 aa16.69■□□□□ 0.26
MEG3-210ENST00000452120 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
MEG3-210ENST00000452120 DNMBPQ6XZF7 1577 aa16.67■□□□□ 0.26
MEG3-210ENST00000452120 CNGB1Q14028 1251 aaPredicted RBP16.66■□□□□ 0.26
MEG3-210ENST00000452120 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
MEG3-210ENST00000452120 ANP32CO43423 234 aa16.65■□□□□ 0.26
MEG3-210ENST00000452120 JPH4Q96JJ6 628 aa16.64■□□□□ 0.25
MEG3-210ENST00000452120 CLSPNQ9HAW4 1339 aa16.64■□□□□ 0.25
MEG3-210ENST00000452120 PRXQ9BXM0 1461 aa16.64■□□□□ 0.25
MEG3-210ENST00000452120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.62■□□□□ 0.25
MEG3-210ENST00000452120 SLC4A1APQ9BWU0 796 aaKnown RBP16.62■□□□□ 0.25
MEG3-210ENST00000452120 AQRO60306 1485 aaKnown RBP eCLIP16.62■□□□□ 0.25
MEG3-210ENST00000452120 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
MEG3-210ENST00000452120 IFT140Q96RY7 1462 aa16.58■□□□□ 0.25
MEG3-210ENST00000452120 DNAJC5BQ9UF47 199 aa16.57■□□□□ 0.24
MEG3-210ENST00000452120 ESF1Q9H501 851 aaKnown RBP16.55■□□□□ 0.24
MEG3-210ENST00000452120 SETD5Q9C0A6 1442 aa16.54■□□□□ 0.24
MEG3-210ENST00000452120 ABCA10Q8WWZ4 1543 aa16.54■□□□□ 0.24
MEG3-210ENST00000452120 CCDC18Q5T9S5 1454 aa16.52■□□□□ 0.23
MEG3-210ENST00000452120 BIVM-ERCC5R4GMW8 1640 aa16.5■□□□□ 0.23
MEG3-210ENST00000452120 CHGAP10645 457 aaKnown RBP16.48■□□□□ 0.23
MEG3-210ENST00000452120 PTPRGP23470 1445 aa16.46■□□□□ 0.23
MEG3-210ENST00000452120 ARAP1Q96P48 1450 aa16.45■□□□□ 0.22
MEG3-210ENST00000452120 EFCAB5A4FU69 1503 aa16.43■□□□□ 0.22
MEG3-210ENST00000452120 DDX10Q13206 875 aaKnown RBP16.43■□□□□ 0.22
MEG3-210ENST00000452120 TIMELESSQ9UNS1 1208 aa16.43■□□□□ 0.22
MEG3-210ENST00000452120 RAB3GAP2Q9H2M9 1393 aa16.43■□□□□ 0.22
MEG3-210ENST00000452120 KDM2AQ9Y2K7 1162 aa16.43■□□□□ 0.22
MEG3-210ENST00000452120 CASKIN1Q8WXD9 1431 aa16.42■□□□□ 0.22
MEG3-210ENST00000452120 URB2Q14146 1524 aaKnown RBP16.42■□□□□ 0.22
MEG3-210ENST00000452120 STAG3Q9UJ98 1225 aa16.42■□□□□ 0.22
MEG3-210ENST00000452120 SIN3AQ96ST3 1273 aa16.41■□□□□ 0.22
MEG3-210ENST00000452120 EIF4G2P78344 907 aaKnown RBP eCLIP16.41■□□□□ 0.22
MEG3-210ENST00000452120 EFCAB2Q5VUJ9 269 aa16.4■□□□□ 0.22
MEG3-210ENST00000452120 BCANQ96GW7 911 aa16.39■□□□□ 0.21
MEG3-210ENST00000452120 SNAPC4Q5SXM2 1469 aa16.38■□□□□ 0.21
MEG3-210ENST00000452120 FYCO1Q9BQS8 1478 aa16.37■□□□□ 0.21
MEG3-210ENST00000452120 LRRC9Q6ZRR7 1453 aa16.37■□□□□ 0.21
MEG3-210ENST00000452120 CUL7Q14999 1698 aa16.37■□□□□ 0.21
MEG3-210ENST00000452120 ANKRD30AQ9BXX3 1397 aa16.36■□□□□ 0.21
MEG3-210ENST00000452120 RSPH4AQ5TD94 716 aa16.36■□□□□ 0.21
MEG3-210ENST00000452120 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
MEG3-210ENST00000452120 RGL3Q3MIN7 710 aa16.31■□□□□ 0.2
MEG3-210ENST00000452120 HIRIP3Q9BW71 556 aaPredicted RBP16.31■□□□□ 0.2
MEG3-210ENST00000452120 KIAA0586Q9BVV6 1533 aa16.29■□□□□ 0.2
MEG3-210ENST00000452120 MYOM3Q5VTT5 1437 aa16.29■□□□□ 0.2
MEG3-210ENST00000452120 FGD6Q6ZV73 1430 aa16.28■□□□□ 0.2
MEG3-210ENST00000452120 KANK1Q14678 1352 aa16.28■□□□□ 0.2
MEG3-210ENST00000452120 PHLDB1Q86UU1 1377 aa16.28■□□□□ 0.2
MEG3-210ENST00000452120 MPHOSPH9Q99550 1183 aa16.28■□□□□ 0.2
MEG3-210ENST00000452120 HNRNPMP52272 730 aaKnown RBP eCLIP16.27■□□□□ 0.2
MEG3-210ENST00000452120 PRDM2Q13029 1718 aa16.26■□□□□ 0.19
MEG3-210ENST00000452120 PKD2Q13563 968 aa16.25■□□□□ 0.19
MEG3-210ENST00000452120 MIER1Q8N108 512 aa16.25■□□□□ 0.19
MEG3-210ENST00000452120 PRG4Q92954 1404 aaPredicted RBP16.25■□□□□ 0.19
MEG3-210ENST00000452120 MAGI1Q96QZ7 1491 aaPredicted RBP16.24■□□□□ 0.19
MEG3-210ENST00000452120 NUP155O75694 1391 aa16.24■□□□□ 0.19
MEG3-210ENST00000452120 NCOA2Q15596 1464 aa16.24■□□□□ 0.19
MEG3-210ENST00000452120 DHX57Q6P158 1386 aaKnown RBP16.24■□□□□ 0.19
MEG3-210ENST00000452120 SYNJ2O15056 1496 aa16.23■□□□□ 0.19
MEG3-210ENST00000452120 IQGAP2Q13576 1575 aa16.23■□□□□ 0.19
MEG3-210ENST00000452120 CARD11Q9BXL7 1154 aa16.22■□□□□ 0.19
MEG3-210ENST00000452120 RRBP1Q9P2E9 1410 aaKnown RBP16.22■□□□□ 0.19
MEG3-210ENST00000452120 GTF3C3Q9Y5Q9 886 aa16.22■□□□□ 0.19
MEG3-210ENST00000452120 TIAM1Q13009 1591 aa16.22■□□□□ 0.19
MEG3-210ENST00000452120 SPAG9O60271 1321 aaKnown RBP16.2■□□□□ 0.18
MEG3-210ENST00000452120 ERICH6Q7L0X2 663 aa16.2■□□□□ 0.18
MEG3-210ENST00000452120 ZNF608Q9ULD9 1512 aaPredicted RBP16.2■□□□□ 0.18
MEG3-210ENST00000452120 GRIN2AQ12879 1464 aa16.2■□□□□ 0.18
MEG3-210ENST00000452120 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
MEG3-210ENST00000452120 HECW1Q76N89 1606 aa16.18■□□□□ 0.18
MEG3-210ENST00000452120 FOXD1Q16676 465 aa16.18■□□□□ 0.18
MEG3-210ENST00000452120 EHBP1L1Q8N3D4 1523 aa16.18■□□□□ 0.18
MEG3-210ENST00000452120 ARID4BQ4LE39 1312 aaPredicted RBP16.17■□□□□ 0.18
MEG3-210ENST00000452120 DCAF11Q8TEB1 546 aa16.16■□□□□ 0.18
MEG3-210ENST00000452120 TMC1Q8TDI8 760 aa16.15■□□□□ 0.18
MEG3-210ENST00000452120 PPP1R15AO75807 674 aaPredicted RBP16.14■□□□□ 0.17
MEG3-210ENST00000452120 CDCA8Q53HL2 280 aa16.14■□□□□ 0.17
MEG3-210ENST00000452120 HNRNPUQ00839 825 aaKnown RBP eCLIP16.14■□□□□ 0.171e-7■■□□□ 12.5
MEG3-210ENST00000452120 MAP3K1Q13233 1512 aa16.13■□□□□ 0.17
MEG3-210ENST00000452120 FAM9BQ8IZU0 186 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms