RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TRHP20396 242 aaPredicted RBP21.6■■□□□ 1.05
CPSF4-208ENST00000452047 JPH4Q96JJ6 628 aa21.59■■□□□ 1.05
CPSF4-208ENST00000452047 KIAA0586Q9BVV6 1533 aa21.57■■□□□ 1.04
CPSF4-208ENST00000452047 CARMIL1Q5VZK9 1371 aa21.55■■□□□ 1.04
CPSF4-208ENST00000452047 IQGAP2Q13576 1575 aa21.43■■□□□ 1.02
CPSF4-208ENST00000452047 ADCY10Q96PN6 1610 aa21.4■■□□□ 1.02
CPSF4-208ENST00000452047 RAPGEF2Q9Y4G8 1499 aa21.4■■□□□ 1.02
CPSF4-208ENST00000452047 KIF13AQ9H1H9 1805 aa21.36■■□□□ 1.01
CPSF4-208ENST00000452047 MAPKBP1O60336 1514 aa21.33■■□□□ 1
CPSF4-208ENST00000452047 CARMIL2Q6F5E8 1435 aa21.31■■□□□ 1
CPSF4-208ENST00000452047 DISP1Q96F81 1524 aa21.3■■□□□ 1
CPSF4-208ENST00000452047 UGGT2Q9NYU1 1516 aa21.3■■□□□ 1
CPSF4-208ENST00000452047 CTTNBP2Q8WZ74 1663 aa21.29■■□□□ 1
CPSF4-208ENST00000452047 PTPRGP23470 1445 aa21.29■■□□□ 1
CPSF4-208ENST00000452047 TNIKQ9UKE5 1360 aa21.28■■□□□ 1
CPSF4-208ENST00000452047 PRXQ9BXM0 1461 aa21.27■■□□□ 1
CPSF4-208ENST00000452047 ABCC10Q5T3U5 1492 aa21.25■□□□□ 0.99
CPSF4-208ENST00000452047 DIP2BQ9P265 1576 aa21.24■□□□□ 0.99
CPSF4-208ENST00000452047 NPM1P06748 294 aaKnown RBP eCLIP21.24■□□□□ 0.99
CPSF4-208ENST00000452047 KIAA0556O60303 1618 aa21.24■□□□□ 0.99
CPSF4-208ENST00000452047 ABCC2Q92887 1545 aa21.19■□□□□ 0.98
CPSF4-208ENST00000452047 UHRF1BP1LA0JNW5 1464 aa21.19■□□□□ 0.98
CPSF4-208ENST00000452047 TTBK1Q5TCY1 1321 aaPredicted RBP21.17■□□□□ 0.98
CPSF4-208ENST00000452047 UACAQ9BZF9 1416 aa21.15■□□□□ 0.98
CPSF4-208ENST00000452047 FAM69CQ0P6D2 419 aa21.14■□□□□ 0.97
CPSF4-208ENST00000452047 KDM5BQ9UGL1 1544 aa21.1■□□□□ 0.97
CPSF4-208ENST00000452047 GOLGA3Q08378 1498 aa21.1■□□□□ 0.97
CPSF4-208ENST00000452047 EEA1Q15075 1411 aa21.09■□□□□ 0.97
CPSF4-208ENST00000452047 ASXL2Q76L83 1435 aa21.08■□□□□ 0.97
CPSF4-208ENST00000452047 CSRNP3Q8WYN3 585 aa21.08■□□□□ 0.97
CPSF4-208ENST00000452047 ZCCHC11Q5TAX3 1644 aaKnown RBP21.07■□□□□ 0.96
CPSF4-208ENST00000452047 PLB1Q6P1J6 1458 aa21.07■□□□□ 0.96
CPSF4-208ENST00000452047 TSPOAP1O95153 1857 aa21.05■□□□□ 0.96
CPSF4-208ENST00000452047 ABCA8O94911 1581 aa21.03■□□□□ 0.96
CPSF4-208ENST00000452047 GLI2P10070 1586 aa21.03■□□□□ 0.96
CPSF4-208ENST00000452047 PPRC1Q5VV67 1664 aaKnown RBP20.99■□□□□ 0.95
CPSF4-208ENST00000452047 SAMD9Q5K651 1589 aa20.99■□□□□ 0.95
CPSF4-208ENST00000452047 EPRSP07814 1512 aaKnown RBP20.97■□□□□ 0.95
CPSF4-208ENST00000452047 KDM6BO15054 1643 aa20.96■□□□□ 0.95
CPSF4-208ENST00000452047 KIF21BO75037 1637 aa20.95■□□□□ 0.94
CPSF4-208ENST00000452047 MAP3K4Q9Y6R4 1608 aa20.95■□□□□ 0.94
CPSF4-208ENST00000452047 WDR7Q9Y4E6 1490 aa20.93■□□□□ 0.94
CPSF4-208ENST00000452047 AEBP2Q6ZN18 517 aaPredicted RBP20.92■□□□□ 0.94
CPSF4-208ENST00000452047 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
CPSF4-208ENST00000452047 FAM9AQ8IZU1 332 aaPredicted RBP20.9■□□□□ 0.94
CPSF4-208ENST00000452047 P3H3Q8IVL6 736 aa20.87■□□□□ 0.93
CPSF4-208ENST00000452047 RAPGEF6Q8TEU7 1601 aa20.84■□□□□ 0.93
CPSF4-208ENST00000452047 CFAP43Q8NDM7 1665 aa20.82■□□□□ 0.92
CPSF4-208ENST00000452047 ATP10BO94823 1461 aa20.81■□□□□ 0.92
CPSF4-208ENST00000452047 TEX14Q8IWB6 1497 aa20.81■□□□□ 0.92
CPSF4-208ENST00000452047 EFCAB5A4FU69 1503 aa20.8■□□□□ 0.92
CPSF4-208ENST00000452047 FHOD3Q2V2M9 1422 aa20.79■□□□□ 0.92
CPSF4-208ENST00000452047 COL17A1Q9UMD9 1497 aaPredicted RBP20.78■□□□□ 0.92
CPSF4-208ENST00000452047 MAGI3Q5TCQ9 1506 aa20.76■□□□□ 0.91
CPSF4-208ENST00000452047 NUP153P49790 1475 aaKnown RBP20.75■□□□□ 0.91
CPSF4-208ENST00000452047 RANGAP1P46060 587 aaPredicted RBP20.75■□□□□ 0.91
CPSF4-208ENST00000452047 ARID3CA6NKF2 412 aa20.74■□□□□ 0.91
CPSF4-208ENST00000452047 CD109Q6YHK3 1445 aa20.74■□□□□ 0.91
CPSF4-208ENST00000452047 KCNH8Q96L42 1107 aa20.73■□□□□ 0.91
CPSF4-208ENST00000452047 ABCA9Q8IUA7 1624 aa20.71■□□□□ 0.91
CPSF4-208ENST00000452047 UBTFP17480 764 aaKnown RBP20.65■□□□□ 0.9
CPSF4-208ENST00000452047 EHMT2Q96KQ7 1210 aa20.65■□□□□ 0.9
CPSF4-208ENST00000452047 ARHGAP35Q9NRY4 1499 aa20.63■□□□□ 0.89
CPSF4-208ENST00000452047 KDM4FA0A1W2PPD8 638 aa20.61■□□□□ 0.89
CPSF4-208ENST00000452047 ARAP3Q8WWN8 1544 aa20.59■□□□□ 0.89
CPSF4-208ENST00000452047 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.59■□□□□ 0.89
CPSF4-208ENST00000452047 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
CPSF4-208ENST00000452047 CDK13Q14004 1512 aaKnown RBP20.58■□□□□ 0.88
CPSF4-208ENST00000452047 FMN1Q68DA7 1419 aa20.57■□□□□ 0.88
CPSF4-208ENST00000452047 HECW1Q76N89 1606 aa20.56■□□□□ 0.88
CPSF4-208ENST00000452047 ADGRL1O94910 1474 aa20.54■□□□□ 0.88
CPSF4-208ENST00000452047 NEO1Q92859 1461 aa20.54■□□□□ 0.88
CPSF4-208ENST00000452047 PLEKHD1A6NEE1 506 aa20.53■□□□□ 0.88
CPSF4-208ENST00000452047 PHLDB1Q86UU1 1377 aa20.53■□□□□ 0.88
CPSF4-208ENST00000452047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.53■□□□□ 0.88
CPSF4-208ENST00000452047 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
CPSF4-208ENST00000452047 LRRIQ1Q96JM4 1722 aa20.49■□□□□ 0.87
CPSF4-208ENST00000452047 FRMPD1Q5SYB0 1578 aa20.48■□□□□ 0.87
CPSF4-208ENST00000452047 CFAP74Q9C0B2 1584 aa20.46■□□□□ 0.87
CPSF4-208ENST00000452047 FANCAO15360 1455 aa20.43■□□□□ 0.86
CPSF4-208ENST00000452047 PCF11O94913 1555 aaKnown RBP20.43■□□□□ 0.86
CPSF4-208ENST00000452047 RICTORQ6R327 1708 aa20.42■□□□□ 0.86
CPSF4-208ENST00000452047 RAPGEF3O95398 923 aa20.41■□□□□ 0.86
CPSF4-208ENST00000452047 KIF14Q15058 1648 aa20.4■□□□□ 0.86
CPSF4-208ENST00000452047 AKNAQ7Z591 1439 aa20.4■□□□□ 0.86
CPSF4-208ENST00000452047 ATP1B4Q9UN42 357 aaPredicted RBP20.4■□□□□ 0.86
CPSF4-208ENST00000452047 CASKIN1Q8WXD9 1431 aa20.39■□□□□ 0.85
CPSF4-208ENST00000452047 MYO5CQ9NQX4 1742 aa20.38■□□□□ 0.85
CPSF4-208ENST00000452047 TROQ12816 1431 aaPredicted RBP20.37■□□□□ 0.85
CPSF4-208ENST00000452047 DENND4BO75064 1496 aaPredicted RBP20.37■□□□□ 0.85
CPSF4-208ENST00000452047 PLCH2O75038 1416 aa20.36■□□□□ 0.85
CPSF4-208ENST00000452047 CLIP1P30622 1438 aa20.36■□□□□ 0.85
CPSF4-208ENST00000452047 CDK11AQ9UQ88 783 aaPredicted RBP20.35■□□□□ 0.85
CPSF4-208ENST00000452047 ARHGEF40Q8TER5 1519 aa20.35■□□□□ 0.85
CPSF4-208ENST00000452047 CCDC18Q5T9S5 1454 aa20.35■□□□□ 0.85
CPSF4-208ENST00000452047 ZMYM4Q5VZL5 1548 aa20.34■□□□□ 0.85
CPSF4-208ENST00000452047 FYCO1Q9BQS8 1478 aa20.34■□□□□ 0.85
CPSF4-208ENST00000452047 ADAMTSL3P82987 1691 aa20.29■□□□□ 0.84
CPSF4-208ENST00000452047 POGZQ7Z3K3 1410 aa20.28■□□□□ 0.84
CPSF4-208ENST00000452047 BCORL1Q5H9F3 1711 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms