RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 KIAA0586Q9BVV6 1533 aa14.71□□□□□ -0.05
COL8A1-203ENST00000452013 RIMBP3CA6NJZ7 1639 aa14.7□□□□□ -0.06
COL8A1-203ENST00000452013 RIMBP3BA6NNM3 1639 aa14.7□□□□□ -0.06
COL8A1-203ENST00000452013 RIMBP3Q9UFD9 1639 aa14.7□□□□□ -0.06
COL8A1-203ENST00000452013 PRG4Q92954 1404 aaPredicted RBP14.67□□□□□ -0.06
COL8A1-203ENST00000452013 PRXQ9BXM0 1461 aa14.67□□□□□ -0.06
COL8A1-203ENST00000452013 ARAP1Q96P48 1450 aa14.64□□□□□ -0.07
COL8A1-203ENST00000452013 CARMIL2Q6F5E8 1435 aa14.61□□□□□ -0.07
COL8A1-203ENST00000452013 SHROOM2Q13796 1616 aa14.59□□□□□ -0.07
COL8A1-203ENST00000452013 UBTFP17480 764 aaKnown RBP14.56□□□□□ -0.08
COL8A1-203ENST00000452013 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
COL8A1-203ENST00000452013 NPM1P06748 294 aaKnown RBP eCLIP14.55□□□□□ -0.08
COL8A1-203ENST00000452013 TNIKQ9UKE5 1360 aa14.55□□□□□ -0.08
COL8A1-203ENST00000452013 PTPRGP23470 1445 aa14.55□□□□□ -0.08
COL8A1-203ENST00000452013 IQGAP2Q13576 1575 aa14.55□□□□□ -0.08
COL8A1-203ENST00000452013 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
COL8A1-203ENST00000452013 EHMT2Q96KQ7 1210 aa14.52□□□□□ -0.09
COL8A1-203ENST00000452013 UGGT2Q9NYU1 1516 aa14.51□□□□□ -0.09
COL8A1-203ENST00000452013 GOLGA3Q08378 1498 aa14.5□□□□□ -0.09
COL8A1-203ENST00000452013 TRHP20396 242 aaPredicted RBP14.49□□□□□ -0.09
COL8A1-203ENST00000452013 RANGAP1P46060 587 aaPredicted RBP14.48□□□□□ -0.09
COL8A1-203ENST00000452013 DISP1Q96F81 1524 aa14.47□□□□□ -0.09
COL8A1-203ENST00000452013 P3H3Q8IVL6 736 aa14.47□□□□□ -0.09
COL8A1-203ENST00000452013 KIF21BO75037 1637 aa14.45□□□□□ -0.1
COL8A1-203ENST00000452013 UACAQ9BZF9 1416 aa14.41□□□□□ -0.1
COL8A1-203ENST00000452013 CTTNBP2Q8WZ74 1663 aa14.39□□□□□ -0.11
COL8A1-203ENST00000452013 KIAA0556O60303 1618 aa14.38□□□□□ -0.11
COL8A1-203ENST00000452013 UHRF1BP1LA0JNW5 1464 aa14.37□□□□□ -0.11
COL8A1-203ENST00000452013 ABCC2Q92887 1545 aa14.33□□□□□ -0.12
COL8A1-203ENST00000452013 FAM69CQ0P6D2 419 aa14.32□□□□□ -0.12
COL8A1-203ENST00000452013 PLB1Q6P1J6 1458 aa14.31□□□□□ -0.12
COL8A1-203ENST00000452013 ADCY10Q96PN6 1610 aa14.3□□□□□ -0.12
COL8A1-203ENST00000452013 FHOD3Q2V2M9 1422 aa14.3□□□□□ -0.12
COL8A1-203ENST00000452013 EFCAB5A4FU69 1503 aa14.3□□□□□ -0.12
COL8A1-203ENST00000452013 LOC105371045A0A1W2PR82 267 aa14.29□□□□□ -0.12
COL8A1-203ENST00000452013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.29□□□□□ -0.12
COL8A1-203ENST00000452013 HNRNPUL2Q1KMD3 747 aaKnown RBP14.29□□□□□ -0.12
COL8A1-203ENST00000452013 SAMD9Q5K651 1589 aa14.29□□□□□ -0.12
COL8A1-203ENST00000452013 KDM5BQ9UGL1 1544 aa14.28□□□□□ -0.12
COL8A1-203ENST00000452013 MAPKBP1O60336 1514 aa14.27□□□□□ -0.12
COL8A1-203ENST00000452013 ATP1B4Q9UN42 357 aaPredicted RBP14.27□□□□□ -0.13
COL8A1-203ENST00000452013 ARID3CA6NKF2 412 aa14.26□□□□□ -0.13
COL8A1-203ENST00000452013 ABCA8O94911 1581 aa14.26□□□□□ -0.13
COL8A1-203ENST00000452013 ABCC10Q5T3U5 1492 aa14.25□□□□□ -0.13
COL8A1-203ENST00000452013 ARHGAP35Q9NRY4 1499 aa14.25□□□□□ -0.13
COL8A1-203ENST00000452013 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
COL8A1-203ENST00000452013 ASXL2Q76L83 1435 aa14.25□□□□□ -0.13
COL8A1-203ENST00000452013 CLIP1P30622 1438 aa14.24□□□□□ -0.13
COL8A1-203ENST00000452013 PLEKHD1A6NEE1 506 aa14.23□□□□□ -0.13
COL8A1-203ENST00000452013 KCNH8Q96L42 1107 aa14.23□□□□□ -0.13
COL8A1-203ENST00000452013 ATP10BO94823 1461 aa14.22□□□□□ -0.13
COL8A1-203ENST00000452013 CDK11AQ9UQ88 783 aaPredicted RBP14.19□□□□□ -0.14
COL8A1-203ENST00000452013 NUP153P49790 1475 aaKnown RBP14.17□□□□□ -0.14
COL8A1-203ENST00000452013 WDR7Q9Y4E6 1490 aa14.17□□□□□ -0.14
COL8A1-203ENST00000452013 RAPGEF6Q8TEU7 1601 aa14.16□□□□□ -0.14
COL8A1-203ENST00000452013 EPRSP07814 1512 aaKnown RBP14.15□□□□□ -0.14
COL8A1-203ENST00000452013 ZCCHC11Q5TAX3 1644 aaKnown RBP14.15□□□□□ -0.14
COL8A1-203ENST00000452013 CEP162Q5TB80 1403 aa14.15□□□□□ -0.14
COL8A1-203ENST00000452013 DIP2BQ9P265 1576 aa14.13□□□□□ -0.15
COL8A1-203ENST00000452013 CASKIN1Q8WXD9 1431 aa14.12□□□□□ -0.15
COL8A1-203ENST00000452013 GLI2P10070 1586 aa14.12□□□□□ -0.15
COL8A1-203ENST00000452013 CD109Q6YHK3 1445 aa14.1□□□□□ -0.15
COL8A1-203ENST00000452013 HECW1Q76N89 1606 aa14.06□□□□□ -0.16
COL8A1-203ENST00000452013 TEX14Q8IWB6 1497 aa14.05□□□□□ -0.16
COL8A1-203ENST00000452013 CCDC18Q5T9S5 1454 aa14.04□□□□□ -0.16
COL8A1-203ENST00000452013 FYCO1Q9BQS8 1478 aa14.04□□□□□ -0.16
COL8A1-203ENST00000452013 CDK13Q14004 1512 aaKnown RBP14.04□□□□□ -0.16
COL8A1-203ENST00000452013 KIF13AQ9H1H9 1805 aa14.03□□□□□ -0.16
COL8A1-203ENST00000452013 MAGI3Q5TCQ9 1506 aa14.02□□□□□ -0.16
COL8A1-203ENST00000452013 PHLDB1Q86UU1 1377 aa14.02□□□□□ -0.17
COL8A1-203ENST00000452013 TROQ12816 1431 aaPredicted RBP14.01□□□□□ -0.17
COL8A1-203ENST00000452013 APLP2Q06481 763 aa13.99□□□□□ -0.17
COL8A1-203ENST00000452013 VPS8Q8N3P4 1428 aa13.98□□□□□ -0.17
COL8A1-203ENST00000452013 PCF11O94913 1555 aaKnown RBP13.98□□□□□ -0.17
COL8A1-203ENST00000452013 EFCAB2Q5VUJ9 269 aa13.98□□□□□ -0.17
COL8A1-203ENST00000452013 MAP3K4Q9Y6R4 1608 aa13.97□□□□□ -0.17
COL8A1-203ENST00000452013 MTUS2Q5JR59 1369 aa13.96□□□□□ -0.17
COL8A1-203ENST00000452013 ABCA9Q8IUA7 1624 aa13.95□□□□□ -0.18
COL8A1-203ENST00000452013 PLCH2O75038 1416 aa13.95□□□□□ -0.18
COL8A1-203ENST00000452013 CFAP43Q8NDM7 1665 aa13.95□□□□□ -0.18
COL8A1-203ENST00000452013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL8A1-203ENST00000452013 NEO1Q92859 1461 aa13.93□□□□□ -0.18
COL8A1-203ENST00000452013 KDM6BO15054 1643 aa13.92□□□□□ -0.18
COL8A1-203ENST00000452013 COL17A1Q9UMD9 1497 aaPredicted RBP13.92□□□□□ -0.18
COL8A1-203ENST00000452013 TSPOAP1O95153 1857 aa13.91□□□□□ -0.18
COL8A1-203ENST00000452013 AKNAQ7Z591 1439 aa13.9□□□□□ -0.18
COL8A1-203ENST00000452013 RAPGEF3O95398 923 aa13.9□□□□□ -0.18
COL8A1-203ENST00000452013 FANCAO15360 1455 aa13.9□□□□□ -0.18
COL8A1-203ENST00000452013 ARAP3Q8WWN8 1544 aa13.9□□□□□ -0.19
COL8A1-203ENST00000452013 KIF14Q15058 1648 aa13.89□□□□□ -0.19
COL8A1-203ENST00000452013 PPRC1Q5VV67 1664 aaKnown RBP13.88□□□□□ -0.19
COL8A1-203ENST00000452013 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
COL8A1-203ENST00000452013 CFDP1Q9UEE9 299 aaPredicted RBP13.88□□□□□ -0.19
COL8A1-203ENST00000452013 ZNF777Q9ULD5 760 aaPredicted RBP13.87□□□□□ -0.19
COL8A1-203ENST00000452013 KANK4Q5T7N3 995 aaPredicted RBP13.86□□□□□ -0.19
COL8A1-203ENST00000452013 SCAPERQ9BY12 1400 aa13.86□□□□□ -0.19
COL8A1-203ENST00000452013 DENND4BO75064 1496 aaPredicted RBP13.86□□□□□ -0.19
COL8A1-203ENST00000452013 MAP3K1Q13233 1512 aa13.85□□□□□ -0.19
COL8A1-203ENST00000452013 TTC37Q6PGP7 1564 aa13.85□□□□□ -0.19
COL8A1-203ENST00000452013 ARHGAP5Q13017 1502 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms