RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 JPH4Q96JJ6 628 aa37.16■■■■□ 3.54
C9orf3-208ENST00000451893 IGF1RP08069 1367 aa37.16■■■■□ 3.54
C9orf3-208ENST00000451893 CARMIL1Q5VZK9 1371 aa37.02■■■■□ 3.52
C9orf3-208ENST00000451893 KIAA0586Q9BVV6 1533 aa37■■■■□ 3.51
C9orf3-208ENST00000451893 NPM1P06748 294 aaKnown RBP eCLIP36.85■■■■□ 3.49
C9orf3-208ENST00000451893 TTBK1Q5TCY1 1321 aaPredicted RBP36.76■■■■□ 3.47
C9orf3-208ENST00000451893 IQGAP2Q13576 1575 aa36.75■■■■□ 3.47
C9orf3-208ENST00000451893 CARMIL2Q6F5E8 1435 aa36.75■■■■□ 3.47
C9orf3-208ENST00000451893 RAPGEF2Q9Y4G8 1499 aa36.74■■■■□ 3.47
C9orf3-208ENST00000451893 ADCY10Q96PN6 1610 aa36.67■■■■□ 3.46
C9orf3-208ENST00000451893 PTPRGP23470 1445 aa36.65■■■■□ 3.46
C9orf3-208ENST00000451893 KIF13AQ9H1H9 1805 aa36.62■■■■□ 3.45
C9orf3-208ENST00000451893 TNIKQ9UKE5 1360 aa36.6■■■■□ 3.45
C9orf3-208ENST00000451893 MAPKBP1O60336 1514 aa36.55■■■■□ 3.44
C9orf3-208ENST00000451893 FAM69CQ0P6D2 419 aa36.53■■■■□ 3.44
C9orf3-208ENST00000451893 CTTNBP2Q8WZ74 1663 aa36.5■■■■□ 3.43
C9orf3-208ENST00000451893 ABCC10Q5T3U5 1492 aa36.48■■■■□ 3.43
C9orf3-208ENST00000451893 UGGT2Q9NYU1 1516 aa36.44■■■■□ 3.42
C9orf3-208ENST00000451893 DISP1Q96F81 1524 aa36.44■■■■□ 3.42
C9orf3-208ENST00000451893 DIP2BQ9P265 1576 aa36.42■■■■□ 3.42
C9orf3-208ENST00000451893 KIAA0556O60303 1618 aa36.39■■■■□ 3.42
C9orf3-208ENST00000451893 ABCC2Q92887 1545 aa36.38■■■■□ 3.41
C9orf3-208ENST00000451893 UACAQ9BZF9 1416 aa36.36■■■■□ 3.41
C9orf3-208ENST00000451893 PRXQ9BXM0 1461 aa36.32■■■■□ 3.41
C9orf3-208ENST00000451893 TSPOAP1O95153 1857 aa36.31■■■■□ 3.4
C9orf3-208ENST00000451893 GOLGA3Q08378 1498 aa36.31■■■■□ 3.4
C9orf3-208ENST00000451893 UHRF1BP1LA0JNW5 1464 aa36.3■■■■□ 3.4
C9orf3-208ENST00000451893 AEBP2Q6ZN18 517 aaPredicted RBP36.24■■■■□ 3.39
C9orf3-208ENST00000451893 ASXL2Q76L83 1435 aa36.24■■■■□ 3.39
C9orf3-208ENST00000451893 PLB1Q6P1J6 1458 aa36.24■■■■□ 3.39
C9orf3-208ENST00000451893 CSRNP3Q8WYN3 585 aa36.23■■■■□ 3.39
C9orf3-208ENST00000451893 FAM9AQ8IZU1 332 aaPredicted RBP36.22■■■■□ 3.39
C9orf3-208ENST00000451893 EEA1Q15075 1411 aa36.17■■■■□ 3.38
C9orf3-208ENST00000451893 ZCCHC11Q5TAX3 1644 aaKnown RBP36.15■■■■□ 3.38
C9orf3-208ENST00000451893 KDM5BQ9UGL1 1544 aa36.13■■■■□ 3.37
C9orf3-208ENST00000451893 KDM6BO15054 1643 aa36.12■■■■□ 3.37
C9orf3-208ENST00000451893 GLI2P10070 1586 aa36.05■■■■□ 3.36
C9orf3-208ENST00000451893 P3H3Q8IVL6 736 aa36.03■■■■□ 3.36
C9orf3-208ENST00000451893 EPRSP07814 1512 aaKnown RBP35.99■■■■□ 3.35
C9orf3-208ENST00000451893 ABCA8O94911 1581 aa35.98■■■■□ 3.35
C9orf3-208ENST00000451893 RANGAP1P46060 587 aaPredicted RBP35.96■■■■□ 3.35
C9orf3-208ENST00000451893 WDR7Q9Y4E6 1490 aa35.94■■■■□ 3.34
C9orf3-208ENST00000451893 PPRC1Q5VV67 1664 aaKnown RBP35.9■■■■□ 3.34
C9orf3-208ENST00000451893 MAP3K4Q9Y6R4 1608 aa35.89■■■■□ 3.34
C9orf3-208ENST00000451893 TEX14Q8IWB6 1497 aa35.88■■■■□ 3.33
C9orf3-208ENST00000451893 SAMD9Q5K651 1589 aa35.87■■■■□ 3.33
C9orf3-208ENST00000451893 ARID3CA6NKF2 412 aa35.86■■■■□ 3.33
C9orf3-208ENST00000451893 KCNH8Q96L42 1107 aa35.85■■■■□ 3.33
C9orf3-208ENST00000451893 KIF21BO75037 1637 aa35.83■■■■□ 3.33
C9orf3-208ENST00000451893 CHIC1Q5VXU3 224 aa35.78■■■■□ 3.32
C9orf3-208ENST00000451893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.77■■■■□ 3.32
C9orf3-208ENST00000451893 HNRNPUL2Q1KMD3 747 aaKnown RBP35.77■■■■□ 3.32
C9orf3-208ENST00000451893 EHMT2Q96KQ7 1210 aa35.77■■■■□ 3.32
C9orf3-208ENST00000451893 RAPGEF6Q8TEU7 1601 aa35.75■■■■□ 3.31
C9orf3-208ENST00000451893 CFAP43Q8NDM7 1665 aa35.75■■■■□ 3.31
C9orf3-208ENST00000451893 CD109Q6YHK3 1445 aa35.72■■■■□ 3.31
C9orf3-208ENST00000451893 UBTFP17480 764 aaKnown RBP35.7■■■■□ 3.31
C9orf3-208ENST00000451893 FHOD3Q2V2M9 1422 aa35.7■■■■□ 3.31
C9orf3-208ENST00000451893 ATP10BO94823 1461 aa35.67■■■■□ 3.3
C9orf3-208ENST00000451893 EFCAB5A4FU69 1503 aa35.65■■■■□ 3.3
C9orf3-208ENST00000451893 MAGI3Q5TCQ9 1506 aa35.6■■■■□ 3.29
C9orf3-208ENST00000451893 COL17A1Q9UMD9 1497 aaPredicted RBP35.55■■■■□ 3.28
C9orf3-208ENST00000451893 NUP153P49790 1475 aaKnown RBP35.52■■■■□ 3.28
C9orf3-208ENST00000451893 ABCA9Q8IUA7 1624 aa35.47■■■■□ 3.27
C9orf3-208ENST00000451893 KDM4FA0A1W2PPD8 638 aa35.45■■■■□ 3.27
C9orf3-208ENST00000451893 PLEKHD1A6NEE1 506 aa35.45■■■■□ 3.27
C9orf3-208ENST00000451893 ATP1B4Q9UN42 357 aaPredicted RBP35.43■■■■□ 3.26
C9orf3-208ENST00000451893 ADGRL1O94910 1474 aa35.36■■■■□ 3.25
C9orf3-208ENST00000451893 FMN1Q68DA7 1419 aa35.35■■■■□ 3.25
C9orf3-208ENST00000451893 PHLDB1Q86UU1 1377 aa35.32■■■■□ 3.24
C9orf3-208ENST00000451893 HECW1Q76N89 1606 aa35.3■■■■□ 3.24
C9orf3-208ENST00000451893 ARAP3Q8WWN8 1544 aa35.3■■■■□ 3.24
C9orf3-208ENST00000451893 ARHGAP35Q9NRY4 1499 aa35.29■■■■□ 3.24
C9orf3-208ENST00000451893 NEO1Q92859 1461 aa35.28■■■■□ 3.24
C9orf3-208ENST00000451893 CDK13Q14004 1512 aaKnown RBP35.27■■■■□ 3.24
C9orf3-208ENST00000451893 CFAP74Q9C0B2 1584 aa35.2■■■■□ 3.23
C9orf3-208ENST00000451893 CDK11AQ9UQ88 783 aaPredicted RBP35.19■■■■□ 3.22
C9orf3-208ENST00000451893 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.17■■■■□ 3.22
C9orf3-208ENST00000451893 RAPGEF3O95398 923 aa35.16■■■■□ 3.22
C9orf3-208ENST00000451893 TTC37Q6PGP7 1564 aa35.14■■■■□ 3.22
C9orf3-208ENST00000451893 FANCAO15360 1455 aa35.13■■■■□ 3.21
C9orf3-208ENST00000451893 AKNAQ7Z591 1439 aa35.08■■■■□ 3.21
C9orf3-208ENST00000451893 DENND4BO75064 1496 aaPredicted RBP35.07■■■■□ 3.2
C9orf3-208ENST00000451893 CLIP1P30622 1438 aa35.05■■■■□ 3.2
C9orf3-208ENST00000451893 KIF14Q15058 1648 aa35.03■■■■□ 3.2
C9orf3-208ENST00000451893 MYO5CQ9NQX4 1742 aa35.01■■■■□ 3.2
C9orf3-208ENST00000451893 FRMPD1Q5SYB0 1578 aa35.01■■■■□ 3.2
C9orf3-208ENST00000451893 ARID4BQ4LE39 1312 aaPredicted RBP35.01■■■■□ 3.19
C9orf3-208ENST00000451893 RICTORQ6R327 1708 aa34.98■■■■□ 3.19
C9orf3-208ENST00000451893 PCF11O94913 1555 aaKnown RBP34.97■■■■□ 3.19
C9orf3-208ENST00000451893 LRRIQ1Q96JM4 1722 aa34.96■■■■□ 3.19
C9orf3-208ENST00000451893 TROQ12816 1431 aaPredicted RBP34.96■■■■□ 3.19
C9orf3-208ENST00000451893 PLCH2O75038 1416 aa34.95■■■■□ 3.19
C9orf3-208ENST00000451893 CCDC18Q5T9S5 1454 aa34.95■■■■□ 3.19
C9orf3-208ENST00000451893 CASKIN1Q8WXD9 1431 aa34.93■■■■□ 3.18
C9orf3-208ENST00000451893 EFCAB2Q5VUJ9 269 aa34.9■■■■□ 3.18
C9orf3-208ENST00000451893 ARHGEF40Q8TER5 1519 aa34.9■■■■□ 3.18
C9orf3-208ENST00000451893 ARHGAP5Q13017 1502 aa34.87■■■■□ 3.17
C9orf3-208ENST00000451893 SCAPERQ9BY12 1400 aa34.87■■■■□ 3.17
C9orf3-208ENST00000451893 FYCO1Q9BQS8 1478 aa34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms