RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 PCGF6Q9BYE7 350 aa10.6□□□□□ -0.71
USP46-202ENST00000451218 IFT140Q96RY7 1462 aa10.59□□□□□ -0.71
USP46-202ENST00000451218 TRIM26Q12899 539 aaPredicted RBP10.59□□□□□ -0.71
USP46-202ENST00000451218 EFCAB5A4FU69 1503 aa10.58□□□□□ -0.72
USP46-202ENST00000451218 MAP3K1Q13233 1512 aa10.58□□□□□ -0.72
USP46-202ENST00000451218 TDRD9Q8NDG6 1382 aaKnown RBP10.58□□□□□ -0.72
USP46-202ENST00000451218 AQRO60306 1485 aaKnown RBP eCLIP10.58□□□□□ -0.72
USP46-202ENST00000451218 TIAM1Q13009 1591 aa10.57□□□□□ -0.72
USP46-202ENST00000451218 CEP170Q5SW79 1584 aa10.57□□□□□ -0.72
USP46-202ENST00000451218 GRIN2BQ13224 1484 aa10.52□□□□□ -0.72
USP46-202ENST00000451218 UGGT2Q9NYU1 1516 aa10.52□□□□□ -0.73
USP46-202ENST00000451218 MAGI3Q5TCQ9 1506 aa10.51□□□□□ -0.73
USP46-202ENST00000451218 HRCP23327 699 aa10.51□□□□□ -0.73
USP46-202ENST00000451218 IQGAP2Q13576 1575 aa10.51□□□□□ -0.73
USP46-202ENST00000451218 FHAD1B1AJZ9 1412 aa10.51□□□□□ -0.73
USP46-202ENST00000451218 UBTFP17480 764 aaKnown RBP10.51□□□□□ -0.73
USP46-202ENST00000451218 DISP1Q96F81 1524 aa10.5□□□□□ -0.73
USP46-202ENST00000451218 ARHGEF11O15085 1522 aa10.49□□□□□ -0.73
USP46-202ENST00000451218 KIAA0556O60303 1618 aa10.49□□□□□ -0.73
USP46-202ENST00000451218 PPARGC1BQ86YN6 1023 aaKnown RBP10.49□□□□□ -0.73
USP46-202ENST00000451218 FYCO1Q9BQS8 1478 aa10.48□□□□□ -0.73
USP46-202ENST00000451218 CHD1O14646 1710 aa10.48□□□□□ -0.73
USP46-202ENST00000451218 GRIN2AQ12879 1464 aa10.48□□□□□ -0.73
USP46-202ENST00000451218 RRBP1Q9P2E9 1410 aaKnown RBP10.48□□□□□ -0.73
USP46-202ENST00000451218 MAGI1Q96QZ7 1491 aaPredicted RBP10.47□□□□□ -0.73
USP46-202ENST00000451218 FHOD3Q2V2M9 1422 aa10.47□□□□□ -0.73
USP46-202ENST00000451218 SHROOM2Q13796 1616 aa10.46□□□□□ -0.73
USP46-202ENST00000451218 KANK4Q5T7N3 995 aaPredicted RBP10.46□□□□□ -0.73
USP46-202ENST00000451218 CASKIN1Q8WXD9 1431 aa10.45□□□□□ -0.74
USP46-202ENST00000451218 LRRC9Q6ZRR7 1453 aa10.45□□□□□ -0.74
USP46-202ENST00000451218 NUP160Q12769 1436 aa10.45□□□□□ -0.74
USP46-202ENST00000451218 ERCC6Q03468 1493 aa10.43□□□□□ -0.74
USP46-202ENST00000451218 SYNJ2O15056 1496 aa10.42□□□□□ -0.74
USP46-202ENST00000451218 KIAA0586Q9BVV6 1533 aa10.4□□□□□ -0.74
USP46-202ENST00000451218 PHLDB1Q86UU1 1377 aa10.37□□□□□ -0.75
USP46-202ENST00000451218 ADCY10Q96PN6 1610 aa10.37□□□□□ -0.75
USP46-202ENST00000451218 HECW1Q76N89 1606 aa10.36□□□□□ -0.75
USP46-202ENST00000451218 RAPGEF6Q8TEU7 1601 aa10.36□□□□□ -0.75
USP46-202ENST00000451218 CLASP1Q7Z460 1538 aa10.36□□□□□ -0.75
USP46-202ENST00000451218 ABCA8O94911 1581 aa10.35□□□□□ -0.75
USP46-202ENST00000451218 NUP153P49790 1475 aaKnown RBP10.34□□□□□ -0.75
USP46-202ENST00000451218 ERCC6L2Q5T890 1561 aa10.33□□□□□ -0.76
USP46-202ENST00000451218 CDK13Q14004 1512 aaKnown RBP10.33□□□□□ -0.76
USP46-202ENST00000451218 FMN1Q68DA7 1419 aa10.32□□□□□ -0.76
USP46-202ENST00000451218 SUPT6HQ7KZ85 1726 aaKnown RBP10.32□□□□□ -0.76
USP46-202ENST00000451218 EPRSP07814 1512 aaKnown RBP10.32□□□□□ -0.76
USP46-202ENST00000451218 EHBP1L1Q8N3D4 1523 aa10.31□□□□□ -0.76
USP46-202ENST00000451218 RANGAP1P46060 587 aaPredicted RBP10.29□□□□□ -0.76
USP46-202ENST00000451218 PTPRKQ15262 1439 aa10.29□□□□□ -0.76
USP46-202ENST00000451218 MAPKBP1O60336 1514 aa10.29□□□□□ -0.76
USP46-202ENST00000451218 KIF14Q15058 1648 aa10.29□□□□□ -0.76
USP46-202ENST00000451218 TCOF1Q13428 1488 aaKnown RBP10.28□□□□□ -0.76
USP46-202ENST00000451218 CROCC2H7BZ55 1655 aa10.28□□□□□ -0.76
USP46-202ENST00000451218 GCC2Q8IWJ2 1684 aa10.27□□□□□ -0.77
USP46-202ENST00000451218 CDC42BPAQ5VT25 1732 aa10.27□□□□□ -0.77
USP46-202ENST00000451218 CCDC18Q5T9S5 1454 aa10.27□□□□□ -0.77
USP46-202ENST00000451218 KDM6BO15054 1643 aa10.26□□□□□ -0.77
USP46-202ENST00000451218 PTPN23Q9H3S7 1636 aa10.26□□□□□ -0.77
USP46-202ENST00000451218 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.26□□□□□ -0.77
USP46-202ENST00000451218 NCOA2Q15596 1464 aa10.26□□□□□ -0.77
USP46-202ENST00000451218 TTBK1Q5TCY1 1321 aaPredicted RBP10.25□□□□□ -0.77
USP46-202ENST00000451218 DENND4BO75064 1496 aaPredicted RBP10.25□□□□□ -0.77
USP46-202ENST00000451218 PLB1Q6P1J6 1458 aa10.25□□□□□ -0.77
USP46-202ENST00000451218 CCNB3Q8WWL7 1395 aa10.25□□□□□ -0.77
USP46-202ENST00000451218 P3H3Q8IVL6 736 aa10.24□□□□□ -0.77
USP46-202ENST00000451218 FGD6Q6ZV73 1430 aa10.23□□□□□ -0.77
USP46-202ENST00000451218 CDC42BPBQ9Y5S2 1711 aa10.21□□□□□ -0.77
USP46-202ENST00000451218 DHX57Q6P158 1386 aaKnown RBP10.21□□□□□ -0.78
USP46-202ENST00000451218 ADRA2BP18089 450 aa10.21□□□□□ -0.78
USP46-202ENST00000451218 ABCC10Q5T3U5 1492 aa10.2□□□□□ -0.78
USP46-202ENST00000451218 DNMT1P26358 1616 aaKnown RBP10.2□□□□□ -0.78
USP46-202ENST00000451218 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.2□□□□□ -0.78
USP46-202ENST00000451218 MYOM3Q5VTT5 1437 aa10.19□□□□□ -0.78
USP46-202ENST00000451218 KDM5BQ9UGL1 1544 aa10.19□□□□□ -0.78
USP46-202ENST00000451218 ITSN2Q9NZM3 1697 aa10.17□□□□□ -0.78
USP46-202ENST00000451218 ATP10BO94823 1461 aa10.16□□□□□ -0.78
USP46-202ENST00000451218 ADGBQ8N7X0 1667 aa10.16□□□□□ -0.78
USP46-202ENST00000451218 PREX2Q70Z35 1606 aa10.16□□□□□ -0.78
USP46-202ENST00000451218 ZCCHC11Q5TAX3 1644 aaKnown RBP10.15□□□□□ -0.78
USP46-202ENST00000451218 TTC37Q6PGP7 1564 aa10.15□□□□□ -0.79
USP46-202ENST00000451218 ABCC2Q92887 1545 aa10.13□□□□□ -0.79
USP46-202ENST00000451218 HFM1A2PYH4 1435 aa10.12□□□□□ -0.79
USP46-202ENST00000451218 PRG4Q92954 1404 aaPredicted RBP10.12□□□□□ -0.79
USP46-202ENST00000451218 NAIPQ13075 1403 aa10.12□□□□□ -0.79
USP46-202ENST00000451218 GPATCH8Q9UKJ3 1502 aaKnown RBP10.12□□□□□ -0.79
USP46-202ENST00000451218 RAB3GAP2Q9H2M9 1393 aa10.12□□□□□ -0.79
USP46-202ENST00000451218 KCNA4P22459 653 aa10.12□□□□□ -0.79
USP46-202ENST00000451218 SAMD9LQ8IVG5 1584 aa10.11□□□□□ -0.79
USP46-202ENST00000451218 MIA2Q96PC5 1412 aa10.11□□□□□ -0.79
USP46-202ENST00000451218 AKNAQ7Z591 1439 aa10.11□□□□□ -0.79
USP46-202ENST00000451218 TROQ12816 1431 aaPredicted RBP10.1□□□□□ -0.79
USP46-202ENST00000451218 JPH4Q96JJ6 628 aa10.1□□□□□ -0.79
USP46-202ENST00000451218 UHRF1BP1LA0JNW5 1464 aa10.1□□□□□ -0.79
USP46-202ENST00000451218 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.09□□□□□ -0.79
USP46-202ENST00000451218 HNRNPUL2Q1KMD3 747 aaKnown RBP10.08□□□□□ -0.8
USP46-202ENST00000451218 CAMSAP2Q08AD1 1489 aa10.08□□□□□ -0.8
USP46-202ENST00000451218 CHMP7Q8WUX9 453 aaPredicted RBP10.07□□□□□ -0.8
USP46-202ENST00000451218 SETD5Q9C0A6 1442 aa10.07□□□□□ -0.8
USP46-202ENST00000451218 ABCC5O15440 1437 aa10.07□□□□□ -0.8
USP46-202ENST00000451218 ADGRL2O95490 1459 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms