RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 CARMIL1Q5VZK9 1371 aa27.48■■□□□ 1.99
SGCE-208ENST00000450385 RUSC2Q8N2Y8 1516 aa27.47■■□□□ 1.99
SGCE-208ENST00000450385 KIAA0586Q9BVV6 1533 aa27.47■■□□□ 1.99
SGCE-208ENST00000450385 PRG4Q92954 1404 aaPredicted RBP27.47■■□□□ 1.99
SGCE-208ENST00000450385 RAPGEF2Q9Y4G8 1499 aa27.27■■□□□ 1.96
SGCE-208ENST00000450385 CARMIL2Q6F5E8 1435 aa27.24■■□□□ 1.95
SGCE-208ENST00000450385 NPM1P06748 294 aaKnown RBP eCLIP27.21■■□□□ 1.95
SGCE-208ENST00000450385 IQGAP2Q13576 1575 aa27.21■■□□□ 1.95
SGCE-208ENST00000450385 TNIKQ9UKE5 1360 aa27.14■■□□□ 1.94
SGCE-208ENST00000450385 PTPRGP23470 1445 aa27.14■■□□□ 1.93
SGCE-208ENST00000450385 MAPKBP1O60336 1514 aa27.09■■□□□ 1.93
SGCE-208ENST00000450385 UGGT2Q9NYU1 1516 aa27.09■■□□□ 1.93
SGCE-208ENST00000450385 ADCY10Q96PN6 1610 aa27.08■■□□□ 1.93
SGCE-208ENST00000450385 PRXQ9BXM0 1461 aa27.06■■□□□ 1.92
SGCE-208ENST00000450385 DISP1Q96F81 1524 aa27.02■■□□□ 1.92
SGCE-208ENST00000450385 KIF13AQ9H1H9 1805 aa27.01■■□□□ 1.91
SGCE-208ENST00000450385 CTTNBP2Q8WZ74 1663 aa27.01■■□□□ 1.91
SGCE-208ENST00000450385 EEA1Q15075 1411 aa27■■□□□ 1.91
SGCE-208ENST00000450385 ABCC10Q5T3U5 1492 aa27■■□□□ 1.91
SGCE-208ENST00000450385 UHRF1BP1LA0JNW5 1464 aa26.99■■□□□ 1.91
SGCE-208ENST00000450385 CSRNP3Q8WYN3 585 aa26.97■■□□□ 1.91
SGCE-208ENST00000450385 GOLGA3Q08378 1498 aa26.96■■□□□ 1.91
SGCE-208ENST00000450385 ABCC2Q92887 1545 aa26.95■■□□□ 1.9
SGCE-208ENST00000450385 UACAQ9BZF9 1416 aa26.94■■□□□ 1.9
SGCE-208ENST00000450385 FAM69CQ0P6D2 419 aa26.93■■□□□ 1.9
SGCE-208ENST00000450385 KIAA0556O60303 1618 aa26.92■■□□□ 1.9
SGCE-208ENST00000450385 DIP2BQ9P265 1576 aa26.88■■□□□ 1.89
SGCE-208ENST00000450385 FAM9AQ8IZU1 332 aaPredicted RBP26.87■■□□□ 1.89
SGCE-208ENST00000450385 PLB1Q6P1J6 1458 aa26.86■■□□□ 1.89
SGCE-208ENST00000450385 TTBK1Q5TCY1 1321 aaPredicted RBP26.85■■□□□ 1.89
SGCE-208ENST00000450385 KDM5BQ9UGL1 1544 aa26.82■■□□□ 1.88
SGCE-208ENST00000450385 ASXL2Q76L83 1435 aa26.77■■□□□ 1.88
SGCE-208ENST00000450385 GLI2P10070 1586 aa26.75■■□□□ 1.87
SGCE-208ENST00000450385 ZCCHC11Q5TAX3 1644 aaKnown RBP26.69■■□□□ 1.86
SGCE-208ENST00000450385 ABCA8O94911 1581 aa26.68■■□□□ 1.86
SGCE-208ENST00000450385 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
SGCE-208ENST00000450385 TSPOAP1O95153 1857 aa26.65■■□□□ 1.86
SGCE-208ENST00000450385 KIF21BO75037 1637 aa26.65■■□□□ 1.86
SGCE-208ENST00000450385 SAMD9Q5K651 1589 aa26.63■■□□□ 1.85
SGCE-208ENST00000450385 EPRSP07814 1512 aaKnown RBP26.63■■□□□ 1.85
SGCE-208ENST00000450385 WDR7Q9Y4E6 1490 aa26.59■■□□□ 1.85
SGCE-208ENST00000450385 KDM6BO15054 1643 aa26.57■■□□□ 1.84
SGCE-208ENST00000450385 MAP3K4Q9Y6R4 1608 aa26.55■■□□□ 1.84
SGCE-208ENST00000450385 TEX14Q8IWB6 1497 aa26.55■■□□□ 1.84
SGCE-208ENST00000450385 P3H3Q8IVL6 736 aa26.53■■□□□ 1.84
SGCE-208ENST00000450385 PPRC1Q5VV67 1664 aaKnown RBP26.51■■□□□ 1.83
SGCE-208ENST00000450385 EFCAB5A4FU69 1503 aa26.5■■□□□ 1.83
SGCE-208ENST00000450385 AEBP2Q6ZN18 517 aaPredicted RBP26.47■■□□□ 1.83
SGCE-208ENST00000450385 ATP10BO94823 1461 aa26.47■■□□□ 1.83
SGCE-208ENST00000450385 RAPGEF6Q8TEU7 1601 aa26.47■■□□□ 1.83
SGCE-208ENST00000450385 CFAP43Q8NDM7 1665 aa26.46■■□□□ 1.83
SGCE-208ENST00000450385 UBTFP17480 764 aaKnown RBP26.42■■□□□ 1.82
SGCE-208ENST00000450385 MAGI3Q5TCQ9 1506 aa26.42■■□□□ 1.82
SGCE-208ENST00000450385 CD109Q6YHK3 1445 aa26.41■■□□□ 1.82
SGCE-208ENST00000450385 KCNH8Q96L42 1107 aa26.41■■□□□ 1.82
SGCE-208ENST00000450385 FHOD3Q2V2M9 1422 aa26.37■■□□□ 1.81
SGCE-208ENST00000450385 RANGAP1P46060 587 aaPredicted RBP26.34■■□□□ 1.81
SGCE-208ENST00000450385 PHLDB1Q86UU1 1377 aa26.33■■□□□ 1.81
SGCE-208ENST00000450385 NUP153P49790 1475 aaKnown RBP26.33■■□□□ 1.81
SGCE-208ENST00000450385 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.3■■□□□ 1.8
SGCE-208ENST00000450385 HNRNPUL2Q1KMD3 747 aaKnown RBP26.3■■□□□ 1.8
SGCE-208ENST00000450385 ABCA9Q8IUA7 1624 aa26.29■■□□□ 1.8
SGCE-208ENST00000450385 PLEKHD1A6NEE1 506 aa26.29■■□□□ 1.8
SGCE-208ENST00000450385 FMN1Q68DA7 1419 aa26.29■■□□□ 1.8
SGCE-208ENST00000450385 COL17A1Q9UMD9 1497 aaPredicted RBP26.28■■□□□ 1.8
SGCE-208ENST00000450385 ARID3CA6NKF2 412 aa26.26■■□□□ 1.79
SGCE-208ENST00000450385 ARAP3Q8WWN8 1544 aa26.22■■□□□ 1.79
SGCE-208ENST00000450385 ARHGAP35Q9NRY4 1499 aa26.2■■□□□ 1.78
SGCE-208ENST00000450385 NEO1Q92859 1461 aa26.17■■□□□ 1.78
SGCE-208ENST00000450385 CDK11AQ9UQ88 783 aaPredicted RBP26.15■■□□□ 1.78
SGCE-208ENST00000450385 EHMT2Q96KQ7 1210 aa26.14■■□□□ 1.78
SGCE-208ENST00000450385 KDM4FA0A1W2PPD8 638 aa26.13■■□□□ 1.77
SGCE-208ENST00000450385 HECW1Q76N89 1606 aa26.13■■□□□ 1.77
SGCE-208ENST00000450385 CFAP74Q9C0B2 1584 aa26.06■■□□□ 1.76
SGCE-208ENST00000450385 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.04■■□□□ 1.76
SGCE-208ENST00000450385 ATP1B4Q9UN42 357 aaPredicted RBP26.03■■□□□ 1.76
SGCE-208ENST00000450385 CDK13Q14004 1512 aaKnown RBP26.03■■□□□ 1.76
SGCE-208ENST00000450385 FANCAO15360 1455 aa25.98■■□□□ 1.75
SGCE-208ENST00000450385 ADGRL1O94910 1474 aa25.98■■□□□ 1.75
SGCE-208ENST00000450385 CASKIN1Q8WXD9 1431 aa25.98■■□□□ 1.75
SGCE-208ENST00000450385 AKNAQ7Z591 1439 aa25.97■■□□□ 1.75
SGCE-208ENST00000450385 CCDC18Q5T9S5 1454 aa25.96■■□□□ 1.75
SGCE-208ENST00000450385 PLCH2O75038 1416 aa25.96■■□□□ 1.75
SGCE-208ENST00000450385 CLIP1P30622 1438 aa25.95■■□□□ 1.74
SGCE-208ENST00000450385 TROQ12816 1431 aaPredicted RBP25.95■■□□□ 1.74
SGCE-208ENST00000450385 DENND4BO75064 1496 aaPredicted RBP25.94■■□□□ 1.74
SGCE-208ENST00000450385 RAPGEF3O95398 923 aa25.94■■□□□ 1.74
SGCE-208ENST00000450385 TTC37Q6PGP7 1564 aa25.94■■□□□ 1.74
SGCE-208ENST00000450385 KIF14Q15058 1648 aa25.9■■□□□ 1.74
SGCE-208ENST00000450385 EFCAB2Q5VUJ9 269 aa25.9■■□□□ 1.74
SGCE-208ENST00000450385 FYCO1Q9BQS8 1478 aa25.9■■□□□ 1.74
SGCE-208ENST00000450385 MYO5CQ9NQX4 1742 aa25.89■■□□□ 1.74
SGCE-208ENST00000450385 RICTORQ6R327 1708 aa25.88■■□□□ 1.73
SGCE-208ENST00000450385 LRRIQ1Q96JM4 1722 aa25.88■■□□□ 1.73
SGCE-208ENST00000450385 FRMPD1Q5SYB0 1578 aa25.86■■□□□ 1.73
SGCE-208ENST00000450385 MAGI2Q86UL8 1455 aa25.86■■□□□ 1.73
SGCE-208ENST00000450385 PCF11O94913 1555 aaKnown RBP25.85■■□□□ 1.73
SGCE-208ENST00000450385 ZMYM4Q5VZL5 1548 aa25.83■■□□□ 1.72
SGCE-208ENST00000450385 SCAPERQ9BY12 1400 aa25.79■■□□□ 1.72
SGCE-208ENST00000450385 ARHGEF40Q8TER5 1519 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms