RNA–Protein interactions for RNA: ENST00000449850.1

KDM1B-202, Transcript of lysine demethylase 1B, humanhuman

TSL 5

Gene KDM1B, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-202ENST00000449850 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
KDM1B-202ENST00000449850 CTTNBP2Q8WZ74 1663 aa18.99■□□□□ 0.63
KDM1B-202ENST00000449850 CHMP7Q8WUX9 453 aaPredicted RBP18.98■□□□□ 0.63
KDM1B-202ENST00000449850 VPS8Q8N3P4 1428 aa18.96■□□□□ 0.63
KDM1B-202ENST00000449850 FBLN2P98095 1184 aa18.95■□□□□ 0.62
KDM1B-202ENST00000449850 IQGAP2Q13576 1575 aa18.89■□□□□ 0.62
KDM1B-202ENST00000449850 KIAA0586Q9BVV6 1533 aa18.89■□□□□ 0.61
KDM1B-202ENST00000449850 CEP170Q5SW79 1584 aa18.89■□□□□ 0.61
KDM1B-202ENST00000449850 NUP160Q12769 1436 aa18.89■□□□□ 0.61
KDM1B-202ENST00000449850 P3H3Q8IVL6 736 aa18.89■□□□□ 0.61
KDM1B-202ENST00000449850 EFCAB5A4FU69 1503 aa18.88■□□□□ 0.61
KDM1B-202ENST00000449850 PPARGC1BQ86YN6 1023 aaKnown RBP18.86■□□□□ 0.61
KDM1B-202ENST00000449850 FHOD3Q2V2M9 1422 aa18.86■□□□□ 0.61
KDM1B-202ENST00000449850 SAMD9Q5K651 1589 aa18.85■□□□□ 0.61
KDM1B-202ENST00000449850 UGGT2Q9NYU1 1516 aa18.81■□□□□ 0.6
KDM1B-202ENST00000449850 CHD1O14646 1710 aa18.79■□□□□ 0.6
KDM1B-202ENST00000449850 DISP1Q96F81 1524 aa18.76■□□□□ 0.59
KDM1B-202ENST00000449850 JPH4Q96JJ6 628 aa18.74■□□□□ 0.59
KDM1B-202ENST00000449850 FMN1Q68DA7 1419 aa18.73■□□□□ 0.59
KDM1B-202ENST00000449850 TTBK1Q5TCY1 1321 aaPredicted RBP18.72■□□□□ 0.59
KDM1B-202ENST00000449850 PCF11O94913 1555 aaKnown RBP18.71■□□□□ 0.59
KDM1B-202ENST00000449850 KIAA0556O60303 1618 aa18.71■□□□□ 0.59
KDM1B-202ENST00000449850 APLP2Q06481 763 aa18.71■□□□□ 0.59
KDM1B-202ENST00000449850 TRIM26Q12899 539 aaPredicted RBP18.71■□□□□ 0.59
KDM1B-202ENST00000449850 PCGF6Q9BYE7 350 aa18.7■□□□□ 0.58
KDM1B-202ENST00000449850 CASKIN1Q8WXD9 1431 aa18.69■□□□□ 0.58
KDM1B-202ENST00000449850 FYCO1Q9BQS8 1478 aa18.67■□□□□ 0.58
KDM1B-202ENST00000449850 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
KDM1B-202ENST00000449850 ATP1B4Q9UN42 357 aaPredicted RBP18.63■□□□□ 0.57
KDM1B-202ENST00000449850 CARMIL2Q6F5E8 1435 aa18.63■□□□□ 0.57
KDM1B-202ENST00000449850 CLASP1Q7Z460 1538 aa18.62■□□□□ 0.57
KDM1B-202ENST00000449850 PRG4Q92954 1404 aaPredicted RBP18.62■□□□□ 0.57
KDM1B-202ENST00000449850 MAP3K1Q13233 1512 aa18.62■□□□□ 0.57
KDM1B-202ENST00000449850 TIAM1Q13009 1591 aa18.61■□□□□ 0.57
KDM1B-202ENST00000449850 SHROOM2Q13796 1616 aa18.6■□□□□ 0.57
KDM1B-202ENST00000449850 LRRC9Q6ZRR7 1453 aa18.55■□□□□ 0.56
KDM1B-202ENST00000449850 CFAP43Q8NDM7 1665 aa18.55■□□□□ 0.56
KDM1B-202ENST00000449850 LRRIQ1Q96JM4 1722 aa18.54■□□□□ 0.56
KDM1B-202ENST00000449850 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
KDM1B-202ENST00000449850 PLB1Q6P1J6 1458 aa18.53■□□□□ 0.56
KDM1B-202ENST00000449850 HECW1Q76N89 1606 aa18.52■□□□□ 0.55
KDM1B-202ENST00000449850 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
KDM1B-202ENST00000449850 NUP153P49790 1475 aaKnown RBP18.5■□□□□ 0.55
KDM1B-202ENST00000449850 EPRSP07814 1512 aaKnown RBP18.5■□□□□ 0.55
KDM1B-202ENST00000449850 RAPGEF6Q8TEU7 1601 aa18.5■□□□□ 0.55
KDM1B-202ENST00000449850 PTPRGP23470 1445 aa18.49■□□□□ 0.55
KDM1B-202ENST00000449850 CCDC18Q5T9S5 1454 aa18.48■□□□□ 0.55
KDM1B-202ENST00000449850 CDK13Q14004 1512 aaKnown RBP18.48■□□□□ 0.55
KDM1B-202ENST00000449850 ARID3CA6NKF2 412 aa18.47■□□□□ 0.55
KDM1B-202ENST00000449850 ABCA8O94911 1581 aa18.45■□□□□ 0.54
KDM1B-202ENST00000449850 MAGI3Q5TCQ9 1506 aa18.44■□□□□ 0.54
KDM1B-202ENST00000449850 MTUS2Q5JR59 1369 aa18.43■□□□□ 0.54
KDM1B-202ENST00000449850 PHLDB1Q86UU1 1377 aa18.41■□□□□ 0.54
KDM1B-202ENST00000449850 UACAQ9BZF9 1416 aa18.38■□□□□ 0.53
KDM1B-202ENST00000449850 RRBP1Q9P2E9 1410 aaKnown RBP18.38■□□□□ 0.53
KDM1B-202ENST00000449850 EHBP1L1Q8N3D4 1523 aa18.38■□□□□ 0.53
KDM1B-202ENST00000449850 ATP10BO94823 1461 aa18.36■□□□□ 0.53
KDM1B-202ENST00000449850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
KDM1B-202ENST00000449850 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
KDM1B-202ENST00000449850 NCOA2Q15596 1464 aa18.34■□□□□ 0.53
KDM1B-202ENST00000449850 ARHGEF11O15085 1522 aa18.32■□□□□ 0.52
KDM1B-202ENST00000449850 CCNB3Q8WWL7 1395 aa18.32■□□□□ 0.52
KDM1B-202ENST00000449850 ABCC2Q92887 1545 aa18.31■□□□□ 0.52
KDM1B-202ENST00000449850 CDK11AQ9UQ88 783 aaPredicted RBP18.31■□□□□ 0.52
KDM1B-202ENST00000449850 HRCP23327 699 aa18.3■□□□□ 0.52
KDM1B-202ENST00000449850 SUPT6HQ7KZ85 1726 aaKnown RBP18.3■□□□□ 0.52
KDM1B-202ENST00000449850 TROQ12816 1431 aaPredicted RBP18.29■□□□□ 0.52
KDM1B-202ENST00000449850 UHRF1BP1LA0JNW5 1464 aa18.28■□□□□ 0.52
KDM1B-202ENST00000449850 MYOM3Q5VTT5 1437 aa18.26■□□□□ 0.51
KDM1B-202ENST00000449850 FGD6Q6ZV73 1430 aa18.25■□□□□ 0.51
KDM1B-202ENST00000449850 PLEKHD1A6NEE1 506 aa18.25■□□□□ 0.51
KDM1B-202ENST00000449850 KDM5BQ9UGL1 1544 aa18.22■□□□□ 0.51
KDM1B-202ENST00000449850 ADCY10Q96PN6 1610 aa18.21■□□□□ 0.51
KDM1B-202ENST00000449850 KIF14Q15058 1648 aa18.2■□□□□ 0.5
KDM1B-202ENST00000449850 FAM50AQ14320 339 aaKnown RBP18.2■□□□□ 0.5
KDM1B-202ENST00000449850 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.19■□□□□ 0.5
KDM1B-202ENST00000449850 ZCCHC11Q5TAX3 1644 aaKnown RBP18.17■□□□□ 0.5
KDM1B-202ENST00000449850 ITGAEP38570 1179 aa18.16■□□□□ 0.5
KDM1B-202ENST00000449850 MIA2Q96PC5 1412 aa18.16■□□□□ 0.5
KDM1B-202ENST00000449850 ABCC10Q5T3U5 1492 aa18.15■□□□□ 0.5
KDM1B-202ENST00000449850 PTPN23Q9H3S7 1636 aa18.14■□□□□ 0.49
KDM1B-202ENST00000449850 GPATCH8Q9UKJ3 1502 aaKnown RBP18.13■□□□□ 0.49
KDM1B-202ENST00000449850 TCOF1Q13428 1488 aaKnown RBP18.13■□□□□ 0.49
KDM1B-202ENST00000449850 RIMBP3CA6NJZ7 1639 aa18.1■□□□□ 0.49
KDM1B-202ENST00000449850 RIMBP3BA6NNM3 1639 aa18.1■□□□□ 0.49
KDM1B-202ENST00000449850 RIMBP3Q9UFD9 1639 aa18.1■□□□□ 0.49
KDM1B-202ENST00000449850 ZNF644Q9H582 1327 aaPredicted RBP18.09■□□□□ 0.49
KDM1B-202ENST00000449850 PTPRKQ15262 1439 aa18.08■□□□□ 0.49
KDM1B-202ENST00000449850 KCNH8Q96L42 1107 aa18.08■□□□□ 0.48
KDM1B-202ENST00000449850 CFDP1Q9UEE9 299 aaPredicted RBP18.08■□□□□ 0.48
KDM1B-202ENST00000449850 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.07■□□□□ 0.48
KDM1B-202ENST00000449850 CYB5RLQ6IPT4 315 aa18.06■□□□□ 0.48
KDM1B-202ENST00000449850 ITSN2Q9NZM3 1697 aa18.05■□□□□ 0.48
KDM1B-202ENST00000449850 TTC37Q6PGP7 1564 aa18.05■□□□□ 0.48
KDM1B-202ENST00000449850 WDR7Q9Y4E6 1490 aa18.05■□□□□ 0.48
KDM1B-202ENST00000449850 CDC42BPAQ5VT25 1732 aa18.04■□□□□ 0.48
KDM1B-202ENST00000449850 ASXL2Q76L83 1435 aa18.03■□□□□ 0.48
KDM1B-202ENST00000449850 CAMSAP2Q08AD1 1489 aa18.02■□□□□ 0.48
KDM1B-202ENST00000449850 NPM1P06748 294 aaKnown RBP eCLIP18.01■□□□□ 0.47
KDM1B-202ENST00000449850 ZNF777Q9ULD5 760 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 165.1 ms