RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 RAPGEF2Q9Y4G8 1499 aa26.24■■□□□ 1.79
TOP3B-211ENST00000449704 CSRNP3Q8WYN3 585 aa26.24■■□□□ 1.79
TOP3B-211ENST00000449704 KIAA0586Q9BVV6 1533 aa26.19■■□□□ 1.78
TOP3B-211ENST00000449704 ARAP1Q96P48 1450 aa26.19■■□□□ 1.78
TOP3B-211ENST00000449704 EEA1Q15075 1411 aa26.18■■□□□ 1.78
TOP3B-211ENST00000449704 PRG4Q92954 1404 aaPredicted RBP26.15■■□□□ 1.78
TOP3B-211ENST00000449704 PRXQ9BXM0 1461 aa26.15■■□□□ 1.78
TOP3B-211ENST00000449704 ERCC6L2Q5T890 1561 aa26.12■■□□□ 1.77
TOP3B-211ENST00000449704 SHROOM2Q13796 1616 aa26.1■■□□□ 1.77
TOP3B-211ENST00000449704 IQGAP2Q13576 1575 aa26■■□□□ 1.75
TOP3B-211ENST00000449704 EHMT2Q96KQ7 1210 aa25.95■■□□□ 1.74
TOP3B-211ENST00000449704 CARMIL2Q6F5E8 1435 aa25.95■■□□□ 1.74
TOP3B-211ENST00000449704 TTBK1Q5TCY1 1321 aaPredicted RBP25.94■■□□□ 1.74
TOP3B-211ENST00000449704 UGGT2Q9NYU1 1516 aa25.87■■□□□ 1.73
TOP3B-211ENST00000449704 PTPRGP23470 1445 aa25.87■■□□□ 1.73
TOP3B-211ENST00000449704 TNIKQ9UKE5 1360 aa25.86■■□□□ 1.73
TOP3B-211ENST00000449704 DISP1Q96F81 1524 aa25.85■■□□□ 1.73
TOP3B-211ENST00000449704 UBTFP17480 764 aaKnown RBP25.84■■□□□ 1.73
TOP3B-211ENST00000449704 CTTNBP2Q8WZ74 1663 aa25.83■■□□□ 1.73
TOP3B-211ENST00000449704 KIF21BO75037 1637 aa25.82■■□□□ 1.72
TOP3B-211ENST00000449704 TRHP20396 242 aaPredicted RBP25.82■■□□□ 1.72
TOP3B-211ENST00000449704 RANGAP1P46060 587 aaPredicted RBP25.82■■□□□ 1.72
TOP3B-211ENST00000449704 GOLGA3Q08378 1498 aa25.78■■□□□ 1.72
TOP3B-211ENST00000449704 P3H3Q8IVL6 736 aa25.76■■□□□ 1.71
TOP3B-211ENST00000449704 NPM1P06748 294 aaKnown RBP eCLIP25.75■■□□□ 1.71
TOP3B-211ENST00000449704 KIAA0556O60303 1618 aa25.74■■□□□ 1.71
TOP3B-211ENST00000449704 UACAQ9BZF9 1416 aa25.66■■□□□ 1.7
TOP3B-211ENST00000449704 ADCY10Q96PN6 1610 aa25.64■■□□□ 1.7
TOP3B-211ENST00000449704 UHRF1BP1LA0JNW5 1464 aa25.58■■□□□ 1.69
TOP3B-211ENST00000449704 PLB1Q6P1J6 1458 aa25.57■■□□□ 1.68
TOP3B-211ENST00000449704 SAMD9Q5K651 1589 aa25.56■■□□□ 1.68
TOP3B-211ENST00000449704 FHOD3Q2V2M9 1422 aa25.55■■□□□ 1.68
TOP3B-211ENST00000449704 ABCC2Q92887 1545 aa25.55■■□□□ 1.68
TOP3B-211ENST00000449704 AEBP2Q6ZN18 517 aaPredicted RBP25.51■■□□□ 1.67
TOP3B-211ENST00000449704 EFCAB5A4FU69 1503 aa25.49■■□□□ 1.67
TOP3B-211ENST00000449704 ARID3CA6NKF2 412 aa25.48■■□□□ 1.67
TOP3B-211ENST00000449704 ABCA8O94911 1581 aa25.47■■□□□ 1.67
TOP3B-211ENST00000449704 MAPKBP1O60336 1514 aa25.47■■□□□ 1.67
TOP3B-211ENST00000449704 FAM69CQ0P6D2 419 aa25.46■■□□□ 1.67
TOP3B-211ENST00000449704 KDM5BQ9UGL1 1544 aa25.46■■□□□ 1.67
TOP3B-211ENST00000449704 ARHGAP35Q9NRY4 1499 aa25.43■■□□□ 1.66
TOP3B-211ENST00000449704 ASXL2Q76L83 1435 aa25.43■■□□□ 1.66
TOP3B-211ENST00000449704 LOC105371045A0A1W2PR82 267 aa25.42■■□□□ 1.66
TOP3B-211ENST00000449704 ABCC10Q5T3U5 1492 aa25.4■■□□□ 1.66
TOP3B-211ENST00000449704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.37■■□□□ 1.65
TOP3B-211ENST00000449704 HNRNPUL2Q1KMD3 747 aaKnown RBP25.37■■□□□ 1.65
TOP3B-211ENST00000449704 ZCCHC11Q5TAX3 1644 aaKnown RBP25.36■■□□□ 1.65
TOP3B-211ENST00000449704 ATP1B4Q9UN42 357 aaPredicted RBP25.35■■□□□ 1.65
TOP3B-211ENST00000449704 CLIP1P30622 1438 aa25.35■■□□□ 1.65
TOP3B-211ENST00000449704 FMN1Q68DA7 1419 aa25.33■■□□□ 1.65
TOP3B-211ENST00000449704 RAPGEF6Q8TEU7 1601 aa25.33■■□□□ 1.65
TOP3B-211ENST00000449704 ATP10BO94823 1461 aa25.33■■□□□ 1.65
TOP3B-211ENST00000449704 KCNH8Q96L42 1107 aa25.31■■□□□ 1.64
TOP3B-211ENST00000449704 NUP153P49790 1475 aaKnown RBP25.3■■□□□ 1.64
TOP3B-211ENST00000449704 DIP2BQ9P265 1576 aa25.3■■□□□ 1.64
TOP3B-211ENST00000449704 WDR7Q9Y4E6 1490 aa25.28■■□□□ 1.64
TOP3B-211ENST00000449704 EPRSP07814 1512 aaKnown RBP25.25■■□□□ 1.63
TOP3B-211ENST00000449704 KIF13AQ9H1H9 1805 aa25.24■■□□□ 1.63
TOP3B-211ENST00000449704 CEP162Q5TB80 1403 aa25.23■■□□□ 1.63
TOP3B-211ENST00000449704 PLEKHD1A6NEE1 506 aa25.21■■□□□ 1.63
TOP3B-211ENST00000449704 GLI2P10070 1586 aa25.17■■□□□ 1.62
TOP3B-211ENST00000449704 CDK13Q14004 1512 aaKnown RBP25.14■■□□□ 1.62
TOP3B-211ENST00000449704 HECW1Q76N89 1606 aa25.13■■□□□ 1.61
TOP3B-211ENST00000449704 CASKIN1Q8WXD9 1431 aa25.12■■□□□ 1.61
TOP3B-211ENST00000449704 CDK11AQ9UQ88 783 aaPredicted RBP25.11■■□□□ 1.61
TOP3B-211ENST00000449704 CD109Q6YHK3 1445 aa25.09■■□□□ 1.61
TOP3B-211ENST00000449704 TSPOAP1O95153 1857 aa25.07■■□□□ 1.6
TOP3B-211ENST00000449704 PCF11O94913 1555 aaKnown RBP25.06■■□□□ 1.6
TOP3B-211ENST00000449704 FYCO1Q9BQS8 1478 aa25.04■■□□□ 1.6
TOP3B-211ENST00000449704 MAP3K4Q9Y6R4 1608 aa25.02■■□□□ 1.6
TOP3B-211ENST00000449704 TEX14Q8IWB6 1497 aa25■■□□□ 1.59
TOP3B-211ENST00000449704 CCDC18Q5T9S5 1454 aa24.99■■□□□ 1.59
TOP3B-211ENST00000449704 MAGI3Q5TCQ9 1506 aa24.96■■□□□ 1.59
TOP3B-211ENST00000449704 PPRC1Q5VV67 1664 aaKnown RBP24.96■■□□□ 1.59
TOP3B-211ENST00000449704 CFAP43Q8NDM7 1665 aa24.96■■□□□ 1.59
TOP3B-211ENST00000449704 TROQ12816 1431 aaPredicted RBP24.95■■□□□ 1.59
TOP3B-211ENST00000449704 ABCA9Q8IUA7 1624 aa24.94■■□□□ 1.58
TOP3B-211ENST00000449704 VPS8Q8N3P4 1428 aa24.91■■□□□ 1.58
TOP3B-211ENST00000449704 LRRIQ1Q96JM4 1722 aa24.9■■□□□ 1.58
TOP3B-211ENST00000449704 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.9■■□□□ 1.58
TOP3B-211ENST00000449704 KDM6BO15054 1643 aa24.9■■□□□ 1.58
TOP3B-211ENST00000449704 COL17A1Q9UMD9 1497 aaPredicted RBP24.87■■□□□ 1.57
TOP3B-211ENST00000449704 TTC37Q6PGP7 1564 aa24.84■■□□□ 1.57
TOP3B-211ENST00000449704 MTUS2Q5JR59 1369 aa24.83■■□□□ 1.57
TOP3B-211ENST00000449704 PHLDB1Q86UU1 1377 aa24.82■■□□□ 1.56
TOP3B-211ENST00000449704 KIF14Q15058 1648 aa24.82■■□□□ 1.56
TOP3B-211ENST00000449704 PLCH2O75038 1416 aa24.8■■□□□ 1.56
TOP3B-211ENST00000449704 NEO1Q92859 1461 aa24.8■■□□□ 1.56
TOP3B-211ENST00000449704 FANCAO15360 1455 aa24.78■■□□□ 1.56
TOP3B-211ENST00000449704 EFCAB2Q5VUJ9 269 aa24.78■■□□□ 1.56
TOP3B-211ENST00000449704 AKNAQ7Z591 1439 aa24.76■■□□□ 1.55
TOP3B-211ENST00000449704 RAPGEF3O95398 923 aa24.75■■□□□ 1.55
TOP3B-211ENST00000449704 ARAP3Q8WWN8 1544 aa24.75■■□□□ 1.55
TOP3B-211ENST00000449704 APLP2Q06481 763 aa24.74■■□□□ 1.55
TOP3B-211ENST00000449704 ARHGAP5Q13017 1502 aa24.69■■□□□ 1.54
TOP3B-211ENST00000449704 CCNB3Q8WWL7 1395 aa24.68■■□□□ 1.54
TOP3B-211ENST00000449704 TIAM1Q13009 1591 aa24.68■■□□□ 1.54
TOP3B-211ENST00000449704 EHBP1L1Q8N3D4 1523 aa24.67■■□□□ 1.54
TOP3B-211ENST00000449704 DENND4BO75064 1496 aaPredicted RBP24.67■■□□□ 1.54
TOP3B-211ENST00000449704 KANK4Q5T7N3 995 aaPredicted RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms