RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 RUSC2Q8N2Y8 1516 aa12.1□□□□□ -0.47
PBRM1-216ENST00000449505 ERCC6L2Q5T890 1561 aa12.08□□□□□ -0.48
PBRM1-216ENST00000449505 KIF27Q86VH2 1401 aa12.07□□□□□ -0.48
PBRM1-216ENST00000449505 PRG4Q92954 1404 aaPredicted RBP12.05□□□□□ -0.48
PBRM1-216ENST00000449505 KIAA0586Q9BVV6 1533 aa12.01□□□□□ -0.49
PBRM1-216ENST00000449505 JPH4Q96JJ6 628 aa12□□□□□ -0.49
PBRM1-216ENST00000449505 PHF23Q9BUL5 403 aaPredicted RBP11.99□□□□□ -0.49
PBRM1-216ENST00000449505 IGF1RP08069 1367 aa11.97□□□□□ -0.49
PBRM1-216ENST00000449505 MAPKBP1O60336 1514 aa11.96□□□□□ -0.49
PBRM1-216ENST00000449505 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.49
PBRM1-216ENST00000449505 KIF13AQ9H1H9 1805 aa11.94□□□□□ -0.5
PBRM1-216ENST00000449505 CARMIL2Q6F5E8 1435 aa11.94□□□□□ -0.5
PBRM1-216ENST00000449505 ADCY10Q96PN6 1610 aa11.93□□□□□ -0.5
PBRM1-216ENST00000449505 CARMIL1Q5VZK9 1371 aa11.92□□□□□ -0.5
PBRM1-216ENST00000449505 IQGAP2Q13576 1575 aa11.92□□□□□ -0.5
PBRM1-216ENST00000449505 ABCC10Q5T3U5 1492 aa11.9□□□□□ -0.5
PBRM1-216ENST00000449505 DIP2BQ9P265 1576 aa11.9□□□□□ -0.5
PBRM1-216ENST00000449505 PTPRGP23470 1445 aa11.87□□□□□ -0.51
PBRM1-216ENST00000449505 TNIKQ9UKE5 1360 aa11.87□□□□□ -0.51
PBRM1-216ENST00000449505 RAPGEF2Q9Y4G8 1499 aa11.87□□□□□ -0.51
PBRM1-216ENST00000449505 ABCC2Q92887 1545 aa11.85□□□□□ -0.51
PBRM1-216ENST00000449505 FAM69CQ0P6D2 419 aa11.84□□□□□ -0.51
PBRM1-216ENST00000449505 UHRF1BP1LA0JNW5 1464 aa11.83□□□□□ -0.52
PBRM1-216ENST00000449505 UGGT2Q9NYU1 1516 aa11.82□□□□□ -0.52
PBRM1-216ENST00000449505 KDM6BO15054 1643 aa11.82□□□□□ -0.52
PBRM1-216ENST00000449505 CTTNBP2Q8WZ74 1663 aa11.81□□□□□ -0.52
PBRM1-216ENST00000449505 KIAA0556O60303 1618 aa11.81□□□□□ -0.52
PBRM1-216ENST00000449505 PLB1Q6P1J6 1458 aa11.81□□□□□ -0.52
PBRM1-216ENST00000449505 DISP1Q96F81 1524 aa11.8□□□□□ -0.52
PBRM1-216ENST00000449505 UACAQ9BZF9 1416 aa11.79□□□□□ -0.52
PBRM1-216ENST00000449505 GOLGA3Q08378 1498 aa11.79□□□□□ -0.52
PBRM1-216ENST00000449505 GLI2P10070 1586 aa11.77□□□□□ -0.53
PBRM1-216ENST00000449505 ASXL2Q76L83 1435 aa11.77□□□□□ -0.53
PBRM1-216ENST00000449505 TSPOAP1O95153 1857 aa11.76□□□□□ -0.53
PBRM1-216ENST00000449505 TTBK1Q5TCY1 1321 aaPredicted RBP11.76□□□□□ -0.53
PBRM1-216ENST00000449505 KDM5BQ9UGL1 1544 aa11.76□□□□□ -0.53
PBRM1-216ENST00000449505 ZCCHC11Q5TAX3 1644 aaKnown RBP11.73□□□□□ -0.53
PBRM1-216ENST00000449505 TEX14Q8IWB6 1497 aa11.73□□□□□ -0.53
PBRM1-216ENST00000449505 PRXQ9BXM0 1461 aa11.72□□□□□ -0.53
PBRM1-216ENST00000449505 FAM9AQ8IZU1 332 aaPredicted RBP11.72□□□□□ -0.53
PBRM1-216ENST00000449505 EPRSP07814 1512 aaKnown RBP11.7□□□□□ -0.54
PBRM1-216ENST00000449505 MAP3K4Q9Y6R4 1608 aa11.7□□□□□ -0.54
PBRM1-216ENST00000449505 WDR7Q9Y4E6 1490 aa11.7□□□□□ -0.54
PBRM1-216ENST00000449505 PPRC1Q5VV67 1664 aaKnown RBP11.68□□□□□ -0.54
PBRM1-216ENST00000449505 EEA1Q15075 1411 aa11.68□□□□□ -0.54
PBRM1-216ENST00000449505 ABCA8O94911 1581 aa11.67□□□□□ -0.54
PBRM1-216ENST00000449505 CFAP43Q8NDM7 1665 aa11.65□□□□□ -0.54
PBRM1-216ENST00000449505 SAMD9Q5K651 1589 aa11.62□□□□□ -0.55
PBRM1-216ENST00000449505 MAGI3Q5TCQ9 1506 aa11.61□□□□□ -0.55
PBRM1-216ENST00000449505 CSRNP3Q8WYN3 585 aa11.59□□□□□ -0.55
PBRM1-216ENST00000449505 CD109Q6YHK3 1445 aa11.59□□□□□ -0.55
PBRM1-216ENST00000449505 RAPGEF6Q8TEU7 1601 aa11.57□□□□□ -0.56
PBRM1-216ENST00000449505 ADGRL1O94910 1474 aa11.57□□□□□ -0.56
PBRM1-216ENST00000449505 EFCAB5A4FU69 1503 aa11.56□□□□□ -0.56
PBRM1-216ENST00000449505 KIF21BO75037 1637 aa11.56□□□□□ -0.56
PBRM1-216ENST00000449505 ABCA9Q8IUA7 1624 aa11.54□□□□□ -0.56
PBRM1-216ENST00000449505 KDM4FA0A1W2PPD8 638 aa11.54□□□□□ -0.56
PBRM1-216ENST00000449505 COL17A1Q9UMD9 1497 aaPredicted RBP11.54□□□□□ -0.56
PBRM1-216ENST00000449505 PHLDB1Q86UU1 1377 aa11.54□□□□□ -0.56
PBRM1-216ENST00000449505 ATP10BO94823 1461 aa11.52□□□□□ -0.56
PBRM1-216ENST00000449505 FOXD1Q16676 465 aa11.52□□□□□ -0.57
PBRM1-216ENST00000449505 KCNH8Q96L42 1107 aa11.52□□□□□ -0.57
PBRM1-216ENST00000449505 ARAP3Q8WWN8 1544 aa11.51□□□□□ -0.57
PBRM1-216ENST00000449505 P3H3Q8IVL6 736 aa11.5□□□□□ -0.57
PBRM1-216ENST00000449505 NEO1Q92859 1461 aa11.5□□□□□ -0.57
PBRM1-216ENST00000449505 FHOD3Q2V2M9 1422 aa11.49□□□□□ -0.57
PBRM1-216ENST00000449505 NUP153P49790 1475 aaKnown RBP11.49□□□□□ -0.57
PBRM1-216ENST00000449505 CFAP74Q9C0B2 1584 aa11.49□□□□□ -0.57
PBRM1-216ENST00000449505 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
PBRM1-216ENST00000449505 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
PBRM1-216ENST00000449505 ARID3CA6NKF2 412 aa11.47□□□□□ -0.57
PBRM1-216ENST00000449505 HECW1Q76N89 1606 aa11.44□□□□□ -0.58
PBRM1-216ENST00000449505 FMN1Q68DA7 1419 aa11.43□□□□□ -0.58
PBRM1-216ENST00000449505 PLEKHD1A6NEE1 506 aa11.43□□□□□ -0.58
PBRM1-216ENST00000449505 RANGAP1P46060 587 aaPredicted RBP11.42□□□□□ -0.58
PBRM1-216ENST00000449505 ARHGEF40Q8TER5 1519 aa11.41□□□□□ -0.58
PBRM1-216ENST00000449505 HECW2Q9P2P5 1572 aa11.41□□□□□ -0.58
PBRM1-216ENST00000449505 FANCAO15360 1455 aa11.39□□□□□ -0.59
PBRM1-216ENST00000449505 FRMPD1Q5SYB0 1578 aa11.39□□□□□ -0.59
PBRM1-216ENST00000449505 DENND4BO75064 1496 aaPredicted RBP11.38□□□□□ -0.59
PBRM1-216ENST00000449505 TTC37Q6PGP7 1564 aa11.38□□□□□ -0.59
PBRM1-216ENST00000449505 UBTFP17480 764 aaKnown RBP11.38□□□□□ -0.59
PBRM1-216ENST00000449505 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.38□□□□□ -0.59
PBRM1-216ENST00000449505 RICTORQ6R327 1708 aa11.38□□□□□ -0.59
PBRM1-216ENST00000449505 ZMYM4Q5VZL5 1548 aa11.37□□□□□ -0.59
PBRM1-216ENST00000449505 CDK11AQ9UQ88 783 aaPredicted RBP11.37□□□□□ -0.59
PBRM1-216ENST00000449505 AKNAQ7Z591 1439 aa11.36□□□□□ -0.59
PBRM1-216ENST00000449505 CDK13Q14004 1512 aaKnown RBP11.36□□□□□ -0.59
PBRM1-216ENST00000449505 KIF14Q15058 1648 aa11.36□□□□□ -0.59
PBRM1-216ENST00000449505 ADAMTSL3P82987 1691 aa11.36□□□□□ -0.59
PBRM1-216ENST00000449505 CLIP1P30622 1438 aa11.35□□□□□ -0.59
PBRM1-216ENST00000449505 BCORL1Q5H9F3 1711 aa11.35□□□□□ -0.59
PBRM1-216ENST00000449505 MYO5CQ9NQX4 1742 aa11.35□□□□□ -0.59
PBRM1-216ENST00000449505 MAGI2Q86UL8 1455 aa11.35□□□□□ -0.59
PBRM1-216ENST00000449505 ARHGAP35Q9NRY4 1499 aa11.35□□□□□ -0.59
PBRM1-216ENST00000449505 POGZQ7Z3K3 1410 aa11.35□□□□□ -0.59
PBRM1-216ENST00000449505 RAPGEF3O95398 923 aa11.34□□□□□ -0.59
PBRM1-216ENST00000449505 ZFYVE16Q7Z3T8 1539 aa11.34□□□□□ -0.59
PBRM1-216ENST00000449505 ARID4BQ4LE39 1312 aaPredicted RBP11.33□□□□□ -0.6
PBRM1-216ENST00000449505 PTPRMP28827 1452 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms