RNA–Protein interactions for RNA: ENST00000449246.5

TRAK1-206, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 3,260 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-206ENST00000449246 RAB3GAP2Q9H2M9 1393 aa16.62■□□□□ 0.25
TRAK1-206ENST00000449246 RRBP1Q9P2E9 1410 aaKnown RBP16.61■□□□□ 0.25
TRAK1-206ENST00000449246 ARHGAP35Q9NRY4 1499 aa16.6■□□□□ 0.25
TRAK1-206ENST00000449246 CDK11AQ9UQ88 783 aaPredicted RBP16.6■□□□□ 0.25
TRAK1-206ENST00000449246 ERICH3Q5RHP9 1530 aa16.58■□□□□ 0.24
TRAK1-206ENST00000449246 MSH5O43196 834 aa16.57■□□□□ 0.24
TRAK1-206ENST00000449246 BIVM-ERCC5R4GMW8 1640 aa16.54■□□□□ 0.24
TRAK1-206ENST00000449246 HNRNPUQ00839 825 aaKnown RBP eCLIP16.54■□□□□ 0.24
TRAK1-206ENST00000449246 CUX2O14529 1486 aa16.52■□□□□ 0.23
TRAK1-206ENST00000449246 IGF1RP08069 1367 aa16.5■□□□□ 0.23
TRAK1-206ENST00000449246 PHLDB1Q86UU1 1377 aa16.49■□□□□ 0.23
TRAK1-206ENST00000449246 PPP1R15AO75807 674 aaPredicted RBP16.47■□□□□ 0.23
TRAK1-206ENST00000449246 MAPKBP1O60336 1514 aa16.47■□□□□ 0.23
TRAK1-206ENST00000449246 SETD5Q9C0A6 1442 aa16.46■□□□□ 0.22
TRAK1-206ENST00000449246 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
TRAK1-206ENST00000449246 CARMIL1Q5VZK9 1371 aa16.45■□□□□ 0.22
TRAK1-206ENST00000449246 NCAPD3P42695 1498 aa16.44■□□□□ 0.22
TRAK1-206ENST00000449246 WDR97A6NE52 1622 aa16.43■□□□□ 0.22
TRAK1-206ENST00000449246 CFTRP13569 1480 aa16.43■□□□□ 0.22
TRAK1-206ENST00000449246 NBR1Q14596 966 aa16.41■□□□□ 0.22
TRAK1-206ENST00000449246 LRRC9Q6ZRR7 1453 aa16.38■□□□□ 0.21
TRAK1-206ENST00000449246 FANCIQ9NVI1 1328 aa16.38■□□□□ 0.21
TRAK1-206ENST00000449246 DEKP35659 375 aaKnown RBP16.38■□□□□ 0.21
TRAK1-206ENST00000449246 TIAM1Q13009 1591 aa16.36■□□□□ 0.21
TRAK1-206ENST00000449246 FHOD3Q2V2M9 1422 aa16.36■□□□□ 0.21
TRAK1-206ENST00000449246 TONSLQ96HA7 1378 aa16.35■□□□□ 0.21
TRAK1-206ENST00000449246 CNGB1Q14028 1251 aaPredicted RBP16.35■□□□□ 0.21
TRAK1-206ENST00000449246 B4GALNT3Q6L9W6 998 aa16.35■□□□□ 0.21
TRAK1-206ENST00000449246 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.2
TRAK1-206ENST00000449246 HMGXB3Q12766 1538 aa16.33■□□□□ 0.2
TRAK1-206ENST00000449246 FAM9BQ8IZU0 186 aa16.32■□□□□ 0.2
TRAK1-206ENST00000449246 PPP4R2Q9NY27 417 aa16.29■□□□□ 0.2
TRAK1-206ENST00000449246 CADPSQ9ULU8 1353 aa16.28■□□□□ 0.2
TRAK1-206ENST00000449246 RAD54L2Q9Y4B4 1467 aa16.27■□□□□ 0.2
TRAK1-206ENST00000449246 TIMELESSQ9UNS1 1208 aa16.27■□□□□ 0.19
TRAK1-206ENST00000449246 MYT1LQ9UL68 1186 aa16.26■□□□□ 0.19
TRAK1-206ENST00000449246 CHIC2Q9UKJ5 165 aa16.25■□□□□ 0.19
TRAK1-206ENST00000449246 FHAD1B1AJZ9 1412 aa16.25■□□□□ 0.19
TRAK1-206ENST00000449246 PCF11O94913 1555 aaKnown RBP16.25■□□□□ 0.19
TRAK1-206ENST00000449246 ARID3CA6NKF2 412 aa16.24■□□□□ 0.19
TRAK1-206ENST00000449246 RTL5Q5HYW3 569 aaPredicted RBP16.22■□□□□ 0.19
TRAK1-206ENST00000449246 NOP58Q9Y2X3 529 aaKnown RBP16.22■□□□□ 0.19
TRAK1-206ENST00000449246 RRP7BPQ9NSQ0 103 aa16.21■□□□□ 0.19
TRAK1-206ENST00000449246 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
TRAK1-206ENST00000449246 MTUS2Q5JR59 1369 aa16.19■□□□□ 0.18
TRAK1-206ENST00000449246 MRS2Q9HD23 443 aa16.19■□□□□ 0.18
TRAK1-206ENST00000449246 PTPRKQ15262 1439 aa16.18■□□□□ 0.18
TRAK1-206ENST00000449246 MAP3K1Q13233 1512 aa16.18■□□□□ 0.18
TRAK1-206ENST00000449246 PAK3O75914 559 aaPredicted RBP16.17■□□□□ 0.18
TRAK1-206ENST00000449246 CCDC184Q52MB2 194 aa16.17■□□□□ 0.18
TRAK1-206ENST00000449246 PRKCSHP14314 528 aaPredicted RBP16.16■□□□□ 0.18
TRAK1-206ENST00000449246 POLR3GLQ9BT43 218 aa16.16■□□□□ 0.18
TRAK1-206ENST00000449246 ANP32AP39687 249 aaKnown RBP16.15■□□□□ 0.18
TRAK1-206ENST00000449246 FOXD1Q16676 465 aa16.15■□□□□ 0.18
TRAK1-206ENST00000449246 FANCD2Q9BXW9 1451 aa16.14■□□□□ 0.17
TRAK1-206ENST00000449246 FGD6Q6ZV73 1430 aa16.14■□□□□ 0.17
TRAK1-206ENST00000449246 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
TRAK1-206ENST00000449246 TDRD9Q8NDG6 1382 aaKnown RBP16.13■□□□□ 0.17
TRAK1-206ENST00000449246 CCDC18Q5T9S5 1454 aa16.13■□□□□ 0.17
TRAK1-206ENST00000449246 ERICH6BQ5W0A0 696 aa16.12■□□□□ 0.17
TRAK1-206ENST00000449246 RTN4Q9NQC3 1192 aaKnown RBP16.12■□□□□ 0.17
TRAK1-206ENST00000449246 CCDC136Q96JN2 1154 aa16.12■□□□□ 0.17
TRAK1-206ENST00000449246 AQRO60306 1485 aaKnown RBP eCLIP16.12■□□□□ 0.172e-8■■■■□ 23
TRAK1-206ENST00000449246 NESP48681 1621 aa16.12■□□□□ 0.17
TRAK1-206ENST00000449246 NPM2Q86SE8 214 aaKnown RBP16.11■□□□□ 0.17
TRAK1-206ENST00000449246 ZBTB47Q9UFB7 747 aaPredicted RBP16.11■□□□□ 0.17
TRAK1-206ENST00000449246 CASKIN1Q8WXD9 1431 aa16.11■□□□□ 0.17
TRAK1-206ENST00000449246 ANO8Q9HCE9 1232 aaPredicted RBP16.11■□□□□ 0.17
TRAK1-206ENST00000449246 EIF4G2P78344 907 aaKnown RBP eCLIP16.1■□□□□ 0.17
TRAK1-206ENST00000449246 WASHC2AQ641Q2 1341 aa16.09■□□□□ 0.17
TRAK1-206ENST00000449246 POLA1P09884 1462 aaPredicted RBP16.08■□□□□ 0.16
TRAK1-206ENST00000449246 FYCO1Q9BQS8 1478 aa16.08■□□□□ 0.16
TRAK1-206ENST00000449246 CFAP43Q8NDM7 1665 aa16.07■□□□□ 0.16
TRAK1-206ENST00000449246 UACAQ9BZF9 1416 aa16.05■□□□□ 0.16
TRAK1-206ENST00000449246 NAIPQ13075 1403 aa16.05■□□□□ 0.16
TRAK1-206ENST00000449246 C11orf95C9JLR9 678 aaPredicted RBP16.04■□□□□ 0.16
TRAK1-206ENST00000449246 FMN1Q68DA7 1419 aa16.03■□□□□ 0.16
TRAK1-206ENST00000449246 HFM1A2PYH4 1435 aa16.03■□□□□ 0.16
TRAK1-206ENST00000449246 PRKRIP1Q9H875 184 aaPredicted RBP16.02■□□□□ 0.16
TRAK1-206ENST00000449246 NCOA2Q15596 1464 aa16.02■□□□□ 0.16
TRAK1-206ENST00000449246 TOPBP1Q92547 1522 aa16.02■□□□□ 0.16
TRAK1-206ENST00000449246 IPO9Q96P70 1041 aaKnown RBP16.01■□□□□ 0.15
TRAK1-206ENST00000449246 L3MBTL2Q969R5 705 aa16.01■□□□□ 0.15
TRAK1-206ENST00000449246 DNAJC5BQ9UF47 199 aa16.01■□□□□ 0.15
TRAK1-206ENST00000449246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16■□□□□ 0.15
TRAK1-206ENST00000449246 ABCA10Q8WWZ4 1543 aa15.99■□□□□ 0.15
TRAK1-206ENST00000449246 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
TRAK1-206ENST00000449246 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
TRAK1-206ENST00000449246 LAS1LQ9Y4W2 734 aaKnown RBP15.99■□□□□ 0.15
TRAK1-206ENST00000449246 ZBED9Q6R2W3 1325 aa15.99■□□□□ 0.15
TRAK1-206ENST00000449246 MYOM3Q5VTT5 1437 aa15.99■□□□□ 0.15
TRAK1-206ENST00000449246 PTPN23Q9H3S7 1636 aa15.98■□□□□ 0.15
TRAK1-206ENST00000449246 IL27Q8NEV9 243 aa15.98■□□□□ 0.15
TRAK1-206ENST00000449246 CC2D2AQ9P2K1 1620 aa15.97■□□□□ 0.15
TRAK1-206ENST00000449246 PRDM2Q13029 1718 aa15.97■□□□□ 0.15
TRAK1-206ENST00000449246 MPHOSPH9Q99550 1183 aa15.97■□□□□ 0.15
TRAK1-206ENST00000449246 EFCAB5A4FU69 1503 aa15.96■□□□□ 0.15
TRAK1-206ENST00000449246 ZNF326Q5BKZ1 582 aaKnown RBP15.95■□□□□ 0.14
TRAK1-206ENST00000449246 DNMBPQ6XZF7 1577 aa15.94■□□□□ 0.14
TRAK1-206ENST00000449246 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms