RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 RIMBP3BA6NNM3 1639 aa15.46■□□□□ 0.07
RFX3-207ENST00000449190 RIMBP3Q9UFD9 1639 aa15.46■□□□□ 0.07
RFX3-207ENST00000449190 KIF27Q86VH2 1401 aa15.46■□□□□ 0.07
RFX3-207ENST00000449190 IGF1RP08069 1367 aa15.46■□□□□ 0.07
RFX3-207ENST00000449190 GRIN2AQ12879 1464 aa15.45■□□□□ 0.06
RFX3-207ENST00000449190 CLASP1Q7Z460 1538 aa15.44■□□□□ 0.06
RFX3-207ENST00000449190 ADAMTS12P58397 1594 aa15.41■□□□□ 0.06
RFX3-207ENST00000449190 NUP160Q12769 1436 aa15.41■□□□□ 0.06
RFX3-207ENST00000449190 ARAP1Q96P48 1450 aa15.36■□□□□ 0.05
RFX3-207ENST00000449190 JPH4Q96JJ6 628 aa15.36■□□□□ 0.05
RFX3-207ENST00000449190 CARMIL1Q5VZK9 1371 aa15.36■□□□□ 0.05
RFX3-207ENST00000449190 CEP170Q5SW79 1584 aa15.33■□□□□ 0.05
RFX3-207ENST00000449190 CUL7Q14999 1698 aa15.28■□□□□ 0.04
RFX3-207ENST00000449190 KIAA0586Q9BVV6 1533 aa15.27■□□□□ 0.03
RFX3-207ENST00000449190 RUSC2Q8N2Y8 1516 aa15.26■□□□□ 0.03
RFX3-207ENST00000449190 PRG4Q92954 1404 aaPredicted RBP15.26■□□□□ 0.03
RFX3-207ENST00000449190 SHROOM2Q13796 1616 aa15.24■□□□□ 0.03
RFX3-207ENST00000449190 ERCC6L2Q5T890 1561 aa15.21■□□□□ 0.03
RFX3-207ENST00000449190 DCAF8L1A6NGE4 600 aa15.21■□□□□ 0.03
RFX3-207ENST00000449190 RAPGEF2Q9Y4G8 1499 aa15.2■□□□□ 0.02
RFX3-207ENST00000449190 RNF39Q9H2S5 420 aa15.2■□□□□ 0.02
RFX3-207ENST00000449190 TRHP20396 242 aaPredicted RBP15.18■□□□□ 0.02
RFX3-207ENST00000449190 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
RFX3-207ENST00000449190 FAM9AQ8IZU1 332 aaPredicted RBP15.15■□□□□ 0.02
RFX3-207ENST00000449190 EEA1Q15075 1411 aa15.14■□□□□ 0.01
RFX3-207ENST00000449190 PRXQ9BXM0 1461 aa15.13■□□□□ 0.01
RFX3-207ENST00000449190 CARMIL2Q6F5E8 1435 aa15.12■□□□□ 0.01
RFX3-207ENST00000449190 NPM1P06748 294 aaKnown RBP eCLIP15.11■□□□□ 0.01
RFX3-207ENST00000449190 PTPRGP23470 1445 aa15.09■□□□□ 0.01
RFX3-207ENST00000449190 HOXD11P31277 338 aaPredicted RBP15.09■□□□□ 0.01
RFX3-207ENST00000449190 TNIKQ9UKE5 1360 aa15.09■□□□□ 0.01
RFX3-207ENST00000449190 IQGAP2Q13576 1575 aa15.07■□□□□ 0
RFX3-207ENST00000449190 TTBK1Q5TCY1 1321 aaPredicted RBP15.04■□□□□ -0
RFX3-207ENST00000449190 UGGT2Q9NYU1 1516 aa15.03■□□□□ -0
RFX3-207ENST00000449190 DISP1Q96F81 1524 aa15.02□□□□□ -0.01
RFX3-207ENST00000449190 GOLGA3Q08378 1498 aa14.97□□□□□ -0.01
RFX3-207ENST00000449190 UACAQ9BZF9 1416 aa14.97□□□□□ -0.01
RFX3-207ENST00000449190 FAM69CQ0P6D2 419 aa14.95□□□□□ -0.02
RFX3-207ENST00000449190 EHMT2Q96KQ7 1210 aa14.95□□□□□ -0.02
RFX3-207ENST00000449190 UHRF1BP1LA0JNW5 1464 aa14.95□□□□□ -0.02
RFX3-207ENST00000449190 ADCY10Q96PN6 1610 aa14.94□□□□□ -0.02
RFX3-207ENST00000449190 UBTFP17480 764 aaKnown RBP14.93□□□□□ -0.02
RFX3-207ENST00000449190 C1QBPQ07021 282 aaKnown RBP14.93□□□□□ -0.02
RFX3-207ENST00000449190 KIAA0556O60303 1618 aa14.92□□□□□ -0.02
RFX3-207ENST00000449190 PPP4R3CPQ6ZMV5 832 aa14.92□□□□□ -0.02
RFX3-207ENST00000449190 CTTNBP2Q8WZ74 1663 aa14.92□□□□□ -0.02
RFX3-207ENST00000449190 MAPKBP1O60336 1514 aa14.92□□□□□ -0.02
RFX3-207ENST00000449190 P3H3Q8IVL6 736 aa14.91□□□□□ -0.02
RFX3-207ENST00000449190 ABCC2Q92887 1545 aa14.91□□□□□ -0.02
RFX3-207ENST00000449190 ABCC10Q5T3U5 1492 aa14.9□□□□□ -0.02
RFX3-207ENST00000449190 KIF21BO75037 1637 aa14.86□□□□□ -0.03
RFX3-207ENST00000449190 PLB1Q6P1J6 1458 aa14.86□□□□□ -0.03
RFX3-207ENST00000449190 KDM5BQ9UGL1 1544 aa14.86□□□□□ -0.03
RFX3-207ENST00000449190 RANGAP1P46060 587 aaPredicted RBP14.85□□□□□ -0.03
RFX3-207ENST00000449190 ASXL2Q76L83 1435 aa14.84□□□□□ -0.03
RFX3-207ENST00000449190 RNF216Q9NWF9 866 aaPredicted RBP14.81□□□□□ -0.04
RFX3-207ENST00000449190 ABCA8O94911 1581 aa14.81□□□□□ -0.04
RFX3-207ENST00000449190 LOC105371045A0A1W2PR82 267 aa14.79□□□□□ -0.04
RFX3-207ENST00000449190 KIF13AQ9H1H9 1805 aa14.78□□□□□ -0.04
RFX3-207ENST00000449190 SAMD9Q5K651 1589 aa14.78□□□□□ -0.04
RFX3-207ENST00000449190 DIP2BQ9P265 1576 aa14.78□□□□□ -0.04
RFX3-207ENST00000449190 CNKSR2Q8WXI2 1034 aa14.78□□□□□ -0.04
RFX3-207ENST00000449190 KCNH8Q96L42 1107 aa14.75□□□□□ -0.05
RFX3-207ENST00000449190 GLI2P10070 1586 aa14.75□□□□□ -0.05
RFX3-207ENST00000449190 ATP10BO94823 1461 aa14.75□□□□□ -0.05
RFX3-207ENST00000449190 FHOD3Q2V2M9 1422 aa14.75□□□□□ -0.05
RFX3-207ENST00000449190 ZCCHC11Q5TAX3 1644 aaKnown RBP14.74□□□□□ -0.05
RFX3-207ENST00000449190 EPRSP07814 1512 aaKnown RBP14.74□□□□□ -0.05
RFX3-207ENST00000449190 ARID3CA6NKF2 412 aa14.73□□□□□ -0.05
RFX3-207ENST00000449190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.73□□□□□ -0.05
RFX3-207ENST00000449190 HNRNPUL2Q1KMD3 747 aaKnown RBP14.73□□□□□ -0.05
RFX3-207ENST00000449190 EFCAB5A4FU69 1503 aa14.72□□□□□ -0.05
RFX3-207ENST00000449190 WDR7Q9Y4E6 1490 aa14.72□□□□□ -0.05
RFX3-207ENST00000449190 PLEKHD1A6NEE1 506 aa14.69□□□□□ -0.06
RFX3-207ENST00000449190 RAPGEF6Q8TEU7 1601 aa14.67□□□□□ -0.06
RFX3-207ENST00000449190 ARHGAP35Q9NRY4 1499 aa14.67□□□□□ -0.06
RFX3-207ENST00000449190 NUP153P49790 1475 aaKnown RBP14.66□□□□□ -0.06
RFX3-207ENST00000449190 FMN1Q68DA7 1419 aa14.66□□□□□ -0.06
RFX3-207ENST00000449190 CD109Q6YHK3 1445 aa14.66□□□□□ -0.06
RFX3-207ENST00000449190 ATP1B4Q9UN42 357 aaPredicted RBP14.64□□□□□ -0.07
RFX3-207ENST00000449190 TEX14Q8IWB6 1497 aa14.63□□□□□ -0.07
RFX3-207ENST00000449190 TSPOAP1O95153 1857 aa14.63□□□□□ -0.07
RFX3-207ENST00000449190 CLIP1P30622 1438 aa14.63□□□□□ -0.07
RFX3-207ENST00000449190 MAP3K4Q9Y6R4 1608 aa14.61□□□□□ -0.07
RFX3-207ENST00000449190 MAGI3Q5TCQ9 1506 aa14.61□□□□□ -0.07
RFX3-207ENST00000449190 CDK11AQ9UQ88 783 aaPredicted RBP14.6□□□□□ -0.07
RFX3-207ENST00000449190 KDM6BO15054 1643 aa14.59□□□□□ -0.07
RFX3-207ENST00000449190 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
RFX3-207ENST00000449190 PPRC1Q5VV67 1664 aaKnown RBP14.58□□□□□ -0.07
RFX3-207ENST00000449190 PHLDB1Q86UU1 1377 aa14.57□□□□□ -0.08
RFX3-207ENST00000449190 COL17A1Q9UMD9 1497 aaPredicted RBP14.57□□□□□ -0.08
RFX3-207ENST00000449190 CFAP43Q8NDM7 1665 aa14.55□□□□□ -0.08
RFX3-207ENST00000449190 ABCA9Q8IUA7 1624 aa14.52□□□□□ -0.08
RFX3-207ENST00000449190 CASKIN1Q8WXD9 1431 aa14.52□□□□□ -0.08
RFX3-207ENST00000449190 CDK13Q14004 1512 aaKnown RBP14.51□□□□□ -0.09
RFX3-207ENST00000449190 HECW1Q76N89 1606 aa14.51□□□□□ -0.09
RFX3-207ENST00000449190 ARAP3Q8WWN8 1544 aa14.49□□□□□ -0.09
RFX3-207ENST00000449190 NEO1Q92859 1461 aa14.48□□□□□ -0.09
RFX3-207ENST00000449190 TROQ12816 1431 aaPredicted RBP14.47□□□□□ -0.09
RFX3-207ENST00000449190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms