RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.25
SHMT2-203ENST00000449049 TNIKQ9UKE5 1360 aa22.83■■□□□ 1.24
SHMT2-203ENST00000449049 KIAA0586Q9BVV6 1533 aa22.76■■□□□ 1.23
SHMT2-203ENST00000449049 IQGAP2Q13576 1575 aa22.74■■□□□ 1.23
SHMT2-203ENST00000449049 CLASP1Q7Z460 1538 aa22.7■■□□□ 1.23
SHMT2-203ENST00000449049 CEP162Q5TB80 1403 aa22.65■■□□□ 1.22
SHMT2-203ENST00000449049 UGGT2Q9NYU1 1516 aa22.64■■□□□ 1.21
SHMT2-203ENST00000449049 OSCARQ8IYS5 282 aa22.63■■□□□ 1.21
SHMT2-203ENST00000449049 SHROOM2Q13796 1616 aa22.62■■□□□ 1.21
SHMT2-203ENST00000449049 CLIP1P30622 1438 aa22.6■■□□□ 1.21
SHMT2-203ENST00000449049 SAMD9Q5K651 1589 aa22.59■■□□□ 1.21
SHMT2-203ENST00000449049 EFCAB5A4FU69 1503 aa22.59■■□□□ 1.21
SHMT2-203ENST00000449049 ARHGAP35Q9NRY4 1499 aa22.56■■□□□ 1.2
SHMT2-203ENST00000449049 JPH4Q96JJ6 628 aa22.56■■□□□ 1.2
SHMT2-203ENST00000449049 RANGAP1P46060 587 aaPredicted RBP22.55■■□□□ 1.2
SHMT2-203ENST00000449049 DISP1Q96F81 1524 aa22.53■■□□□ 1.2
SHMT2-203ENST00000449049 KIAA0556O60303 1618 aa22.52■■□□□ 1.2
SHMT2-203ENST00000449049 PRG4Q92954 1404 aaPredicted RBP22.48■■□□□ 1.19
SHMT2-203ENST00000449049 ARAP1Q96P48 1450 aa22.47■■□□□ 1.19
SHMT2-203ENST00000449049 CARMIL2Q6F5E8 1435 aa22.47■■□□□ 1.19
SHMT2-203ENST00000449049 FHOD3Q2V2M9 1422 aa22.44■■□□□ 1.18
SHMT2-203ENST00000449049 ERCC6L2Q5T890 1561 aa22.44■■□□□ 1.18
SHMT2-203ENST00000449049 P3H3Q8IVL6 736 aa22.41■■□□□ 1.18
SHMT2-203ENST00000449049 VPS8Q8N3P4 1428 aa22.35■■□□□ 1.17
SHMT2-203ENST00000449049 FMN1Q68DA7 1419 aa22.34■■□□□ 1.17
SHMT2-203ENST00000449049 ARHGEF11O15085 1522 aa22.32■■□□□ 1.16
SHMT2-203ENST00000449049 PTPRGP23470 1445 aa22.28■■□□□ 1.16
SHMT2-203ENST00000449049 PCF11O94913 1555 aaKnown RBP22.27■■□□□ 1.16
SHMT2-203ENST00000449049 RIMBP3CA6NJZ7 1639 aa22.26■■□□□ 1.15
SHMT2-203ENST00000449049 RIMBP3BA6NNM3 1639 aa22.26■■□□□ 1.15
SHMT2-203ENST00000449049 RIMBP3Q9UFD9 1639 aa22.26■■□□□ 1.15
SHMT2-203ENST00000449049 CASKIN1Q8WXD9 1431 aa22.24■■□□□ 1.15
SHMT2-203ENST00000449049 ABCA8O94911 1581 aa22.24■■□□□ 1.15
SHMT2-203ENST00000449049 FYCO1Q9BQS8 1478 aa22.23■■□□□ 1.15
SHMT2-203ENST00000449049 RAPGEF6Q8TEU7 1601 aa22.23■■□□□ 1.15
SHMT2-203ENST00000449049 TTBK1Q5TCY1 1321 aaPredicted RBP22.22■■□□□ 1.15
SHMT2-203ENST00000449049 PLB1Q6P1J6 1458 aa22.21■■□□□ 1.15
SHMT2-203ENST00000449049 HECW1Q76N89 1606 aa22.2■■□□□ 1.14
SHMT2-203ENST00000449049 UACAQ9BZF9 1416 aa22.17■■□□□ 1.14
SHMT2-203ENST00000449049 ABCC2Q92887 1545 aa22.15■■□□□ 1.14
SHMT2-203ENST00000449049 LRRIQ1Q96JM4 1722 aa22.15■■□□□ 1.14
SHMT2-203ENST00000449049 UHRF1BP1LA0JNW5 1464 aa22.15■■□□□ 1.14
SHMT2-203ENST00000449049 NUP153P49790 1475 aaKnown RBP22.15■■□□□ 1.14
SHMT2-203ENST00000449049 ADCY10Q96PN6 1610 aa22.1■■□□□ 1.13
SHMT2-203ENST00000449049 EPRSP07814 1512 aaKnown RBP22.1■■□□□ 1.13
SHMT2-203ENST00000449049 MAP3K1Q13233 1512 aa22.1■■□□□ 1.13
SHMT2-203ENST00000449049 CFAP43Q8NDM7 1665 aa22.1■■□□□ 1.13
SHMT2-203ENST00000449049 CCDC18Q5T9S5 1454 aa22.09■■□□□ 1.13
SHMT2-203ENST00000449049 TIAM1Q13009 1591 aa22.08■■□□□ 1.13
SHMT2-203ENST00000449049 ATP1B4Q9UN42 357 aaPredicted RBP22.07■■□□□ 1.12
SHMT2-203ENST00000449049 DNAJC5Q9H3Z4 198 aa22.06■■□□□ 1.12
SHMT2-203ENST00000449049 CDK13Q14004 1512 aaKnown RBP22.05■■□□□ 1.12
SHMT2-203ENST00000449049 KDM5BQ9UGL1 1544 aa22.04■■□□□ 1.12
SHMT2-203ENST00000449049 ATP10BO94823 1461 aa22.03■■□□□ 1.12
SHMT2-203ENST00000449049 APLP2Q06481 763 aa22.01■■□□□ 1.11
SHMT2-203ENST00000449049 CYB5RLQ6IPT4 315 aa22.01■■□□□ 1.11
SHMT2-203ENST00000449049 ZCCHC11Q5TAX3 1644 aaKnown RBP22.01■■□□□ 1.11
SHMT2-203ENST00000449049 ARID3CA6NKF2 412 aa21.98■■□□□ 1.11
SHMT2-203ENST00000449049 LRRC9Q6ZRR7 1453 aa21.96■■□□□ 1.11
SHMT2-203ENST00000449049 MAGI3Q5TCQ9 1506 aa21.95■■□□□ 1.1
SHMT2-203ENST00000449049 EHBP1L1Q8N3D4 1523 aa21.92■■□□□ 1.1
SHMT2-203ENST00000449049 KANK4Q5T7N3 995 aaPredicted RBP21.92■■□□□ 1.1
SHMT2-203ENST00000449049 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.91■■□□□ 1.1
SHMT2-203ENST00000449049 HNRNPUL2Q1KMD3 747 aaKnown RBP21.91■■□□□ 1.1
SHMT2-203ENST00000449049 CDK11AQ9UQ88 783 aaPredicted RBP21.9■■□□□ 1.1
SHMT2-203ENST00000449049 MTUS2Q5JR59 1369 aa21.89■■□□□ 1.09
SHMT2-203ENST00000449049 TROQ12816 1431 aaPredicted RBP21.88■■□□□ 1.09
SHMT2-203ENST00000449049 NPM1P06748 294 aaKnown RBP eCLIP21.87■■□□□ 1.09
SHMT2-203ENST00000449049 PLEKHD1A6NEE1 506 aa21.85■■□□□ 1.09
SHMT2-203ENST00000449049 MAPKBP1O60336 1514 aa21.84■■□□□ 1.09
SHMT2-203ENST00000449049 PPARGC1BQ86YN6 1023 aaKnown RBP21.84■■□□□ 1.09
SHMT2-203ENST00000449049 SUPT6HQ7KZ85 1726 aaKnown RBP21.83■■□□□ 1.09
SHMT2-203ENST00000449049 WDR7Q9Y4E6 1490 aa21.82■■□□□ 1.08
SHMT2-203ENST00000449049 ASXL2Q76L83 1435 aa21.82■■□□□ 1.08
SHMT2-203ENST00000449049 KIF14Q15058 1648 aa21.8■■□□□ 1.08
SHMT2-203ENST00000449049 NCOA2Q15596 1464 aa21.78■■□□□ 1.08
SHMT2-203ENST00000449049 ABCC10Q5T3U5 1492 aa21.74■■□□□ 1.07
SHMT2-203ENST00000449049 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.72■■□□□ 1.07
SHMT2-203ENST00000449049 PHLDB1Q86UU1 1377 aa21.7■■□□□ 1.06
SHMT2-203ENST00000449049 TTC37Q6PGP7 1564 aa21.7■■□□□ 1.06
SHMT2-203ENST00000449049 ABCA9Q8IUA7 1624 aa21.69■■□□□ 1.06
SHMT2-203ENST00000449049 KCNH8Q96L42 1107 aa21.68■■□□□ 1.06
SHMT2-203ENST00000449049 ITSN2Q9NZM3 1697 aa21.66■■□□□ 1.06
SHMT2-203ENST00000449049 MYOM3Q5VTT5 1437 aa21.66■■□□□ 1.06
SHMT2-203ENST00000449049 CDC42BPAQ5VT25 1732 aa21.66■■□□□ 1.06
SHMT2-203ENST00000449049 GLI2P10070 1586 aa21.65■■□□□ 1.06
SHMT2-203ENST00000449049 DIP2BQ9P265 1576 aa21.65■■□□□ 1.06
SHMT2-203ENST00000449049 CCNB3Q8WWL7 1395 aa21.65■■□□□ 1.06
SHMT2-203ENST00000449049 GPATCH8Q9UKJ3 1502 aaKnown RBP21.64■■□□□ 1.05
SHMT2-203ENST00000449049 MYO5CQ9NQX4 1742 aa21.63■■□□□ 1.05
SHMT2-203ENST00000449049 PREX2Q70Z35 1606 aa21.63■■□□□ 1.05
SHMT2-203ENST00000449049 RRBP1Q9P2E9 1410 aaKnown RBP21.61■■□□□ 1.05
SHMT2-203ENST00000449049 FGD6Q6ZV73 1430 aa21.6■■□□□ 1.05
SHMT2-203ENST00000449049 CDC42BPBQ9Y5S2 1711 aa21.6■■□□□ 1.05
SHMT2-203ENST00000449049 MIA2Q96PC5 1412 aa21.6■■□□□ 1.05
SHMT2-203ENST00000449049 ARAP3Q8WWN8 1544 aa21.59■■□□□ 1.05
SHMT2-203ENST00000449049 MAP3K4Q9Y6R4 1608 aa21.58■■□□□ 1.05
SHMT2-203ENST00000449049 PLCH2O75038 1416 aa21.58■■□□□ 1.04
SHMT2-203ENST00000449049 KIF13AQ9H1H9 1805 aa21.58■■□□□ 1.04
SHMT2-203ENST00000449049 PTPN23Q9H3S7 1636 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms