RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 JPH4Q96JJ6 628 aa30.45■■■□□ 2.47
DDX56-207ENST00000448192 PRG4Q92954 1404 aaPredicted RBP30.45■■■□□ 2.46
DDX56-207ENST00000448192 CARMIL1Q5VZK9 1371 aa30.38■■■□□ 2.45
DDX56-207ENST00000448192 KIAA0586Q9BVV6 1533 aa30.34■■■□□ 2.45
DDX56-207ENST00000448192 RAPGEF2Q9Y4G8 1499 aa30.14■■■□□ 2.42
DDX56-207ENST00000448192 IQGAP2Q13576 1575 aa30.14■■■□□ 2.42
DDX56-207ENST00000448192 ADCY10Q96PN6 1610 aa30.06■■■□□ 2.4
DDX56-207ENST00000448192 CARMIL2Q6F5E8 1435 aa30.05■■■□□ 2.4
DDX56-207ENST00000448192 NPM1P06748 294 aaKnown RBP eCLIP30.05■■■□□ 2.4
DDX56-207ENST00000448192 TTBK1Q5TCY1 1321 aaPredicted RBP30.04■■■□□ 2.4
DDX56-207ENST00000448192 PTPRGP23470 1445 aa30.01■■■□□ 2.39
DDX56-207ENST00000448192 KIF13AQ9H1H9 1805 aa29.99■■■□□ 2.39
DDX56-207ENST00000448192 TNIKQ9UKE5 1360 aa29.98■■■□□ 2.39
DDX56-207ENST00000448192 CTTNBP2Q8WZ74 1663 aa29.95■■■□□ 2.39
DDX56-207ENST00000448192 DISP1Q96F81 1524 aa29.94■■■□□ 2.38
DDX56-207ENST00000448192 UGGT2Q9NYU1 1516 aa29.92■■■□□ 2.38
DDX56-207ENST00000448192 MAPKBP1O60336 1514 aa29.91■■■□□ 2.38
DDX56-207ENST00000448192 PRXQ9BXM0 1461 aa29.89■■■□□ 2.38
DDX56-207ENST00000448192 ABCC10Q5T3U5 1492 aa29.85■■■□□ 2.37
DDX56-207ENST00000448192 KIAA0556O60303 1618 aa29.85■■■□□ 2.37
DDX56-207ENST00000448192 FAM69CQ0P6D2 419 aa29.84■■■□□ 2.37
DDX56-207ENST00000448192 DIP2BQ9P265 1576 aa29.81■■■□□ 2.36
DDX56-207ENST00000448192 ABCC2Q92887 1545 aa29.8■■■□□ 2.36
DDX56-207ENST00000448192 CSRNP3Q8WYN3 585 aa29.79■■■□□ 2.36
DDX56-207ENST00000448192 UACAQ9BZF9 1416 aa29.79■■■□□ 2.36
DDX56-207ENST00000448192 UHRF1BP1LA0JNW5 1464 aa29.76■■■□□ 2.35
DDX56-207ENST00000448192 GOLGA3Q08378 1498 aa29.73■■■□□ 2.35
DDX56-207ENST00000448192 EEA1Q15075 1411 aa29.7■■■□□ 2.34
DDX56-207ENST00000448192 TSPOAP1O95153 1857 aa29.69■■■□□ 2.34
DDX56-207ENST00000448192 ASXL2Q76L83 1435 aa29.67■■■□□ 2.34
DDX56-207ENST00000448192 FAM9AQ8IZU1 332 aaPredicted RBP29.66■■■□□ 2.34
DDX56-207ENST00000448192 PLB1Q6P1J6 1458 aa29.64■■■□□ 2.34
DDX56-207ENST00000448192 ZCCHC11Q5TAX3 1644 aaKnown RBP29.63■■■□□ 2.33
DDX56-207ENST00000448192 KDM5BQ9UGL1 1544 aa29.63■■■□□ 2.33
DDX56-207ENST00000448192 P3H3Q8IVL6 736 aa29.56■■■□□ 2.32
DDX56-207ENST00000448192 CHIC1Q5VXU3 224 aa29.55■■■□□ 2.32
DDX56-207ENST00000448192 ABCA8O94911 1581 aa29.54■■■□□ 2.32
DDX56-207ENST00000448192 GLI2P10070 1586 aa29.53■■■□□ 2.32
DDX56-207ENST00000448192 KDM6BO15054 1643 aa29.49■■■□□ 2.31
DDX56-207ENST00000448192 SAMD9Q5K651 1589 aa29.48■■■□□ 2.31
DDX56-207ENST00000448192 EPRSP07814 1512 aaKnown RBP29.48■■■□□ 2.31
DDX56-207ENST00000448192 KIF21BO75037 1637 aa29.47■■■□□ 2.31
DDX56-207ENST00000448192 RANGAP1P46060 587 aaPredicted RBP29.47■■■□□ 2.31
DDX56-207ENST00000448192 PPRC1Q5VV67 1664 aaKnown RBP29.44■■■□□ 2.3
DDX56-207ENST00000448192 WDR7Q9Y4E6 1490 aa29.43■■■□□ 2.3
DDX56-207ENST00000448192 MAP3K4Q9Y6R4 1608 aa29.42■■■□□ 2.3
DDX56-207ENST00000448192 AEBP2Q6ZN18 517 aaPredicted RBP29.38■■■□□ 2.29
DDX56-207ENST00000448192 ARID3CA6NKF2 412 aa29.37■■■□□ 2.29
DDX56-207ENST00000448192 EHMT2Q96KQ7 1210 aa29.36■■■□□ 2.29
DDX56-207ENST00000448192 KCNH8Q96L42 1107 aa29.34■■■□□ 2.29
DDX56-207ENST00000448192 RAPGEF6Q8TEU7 1601 aa29.32■■■□□ 2.28
DDX56-207ENST00000448192 FHOD3Q2V2M9 1422 aa29.3■■■□□ 2.28
DDX56-207ENST00000448192 ATP10BO94823 1461 aa29.29■■■□□ 2.28
DDX56-207ENST00000448192 TEX14Q8IWB6 1497 aa29.29■■■□□ 2.28
DDX56-207ENST00000448192 UBTFP17480 764 aaKnown RBP29.28■■■□□ 2.28
DDX56-207ENST00000448192 CFAP43Q8NDM7 1665 aa29.27■■■□□ 2.28
DDX56-207ENST00000448192 EFCAB5A4FU69 1503 aa29.25■■■□□ 2.27
DDX56-207ENST00000448192 CD109Q6YHK3 1445 aa29.22■■■□□ 2.27
DDX56-207ENST00000448192 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.21■■■□□ 2.27
DDX56-207ENST00000448192 HNRNPUL2Q1KMD3 747 aaKnown RBP29.21■■■□□ 2.27
DDX56-207ENST00000448192 NUP153P49790 1475 aaKnown RBP29.18■■■□□ 2.26
DDX56-207ENST00000448192 COL17A1Q9UMD9 1497 aaPredicted RBP29.18■■■□□ 2.26
DDX56-207ENST00000448192 MAGI3Q5TCQ9 1506 aa29.16■■■□□ 2.26
DDX56-207ENST00000448192 ABCA9Q8IUA7 1624 aa29.09■■■□□ 2.25
DDX56-207ENST00000448192 ARHGAP35Q9NRY4 1499 aa29.04■■■□□ 2.24
DDX56-207ENST00000448192 PLEKHD1A6NEE1 506 aa29.02■■■□□ 2.24
DDX56-207ENST00000448192 KDM4FA0A1W2PPD8 638 aa29■■■□□ 2.23
DDX56-207ENST00000448192 ATP1B4Q9UN42 357 aaPredicted RBP28.99■■■□□ 2.23
DDX56-207ENST00000448192 FMN1Q68DA7 1419 aa28.99■■■□□ 2.23
DDX56-207ENST00000448192 CDK13Q14004 1512 aaKnown RBP28.97■■■□□ 2.23
DDX56-207ENST00000448192 HECW1Q76N89 1606 aa28.94■■■□□ 2.22
DDX56-207ENST00000448192 ARAP3Q8WWN8 1544 aa28.93■■■□□ 2.22
DDX56-207ENST00000448192 PHLDB1Q86UU1 1377 aa28.89■■■□□ 2.22
DDX56-207ENST00000448192 ADGRL1O94910 1474 aa28.88■■■□□ 2.21
DDX56-207ENST00000448192 NEO1Q92859 1461 aa28.88■■■□□ 2.21
DDX56-207ENST00000448192 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.87■■■□□ 2.21
DDX56-207ENST00000448192 TTC37Q6PGP7 1564 aa28.84■■■□□ 2.21
DDX56-207ENST00000448192 LRRIQ1Q96JM4 1722 aa28.8■■■□□ 2.2
DDX56-207ENST00000448192 RAPGEF3O95398 923 aa28.8■■■□□ 2.2
DDX56-207ENST00000448192 CDK11AQ9UQ88 783 aaPredicted RBP28.79■■■□□ 2.2
DDX56-207ENST00000448192 CFAP74Q9C0B2 1584 aa28.78■■■□□ 2.2
DDX56-207ENST00000448192 FANCAO15360 1455 aa28.77■■■□□ 2.2
DDX56-207ENST00000448192 AKNAQ7Z591 1439 aa28.74■■■□□ 2.19
DDX56-207ENST00000448192 PCF11O94913 1555 aaKnown RBP28.74■■■□□ 2.19
DDX56-207ENST00000448192 FRMPD1Q5SYB0 1578 aa28.73■■■□□ 2.19
DDX56-207ENST00000448192 CLIP1P30622 1438 aa28.72■■■□□ 2.19
DDX56-207ENST00000448192 KIF14Q15058 1648 aa28.71■■■□□ 2.19
DDX56-207ENST00000448192 CASKIN1Q8WXD9 1431 aa28.7■■■□□ 2.19
DDX56-207ENST00000448192 MYO5CQ9NQX4 1742 aa28.69■■■□□ 2.18
DDX56-207ENST00000448192 DENND4BO75064 1496 aaPredicted RBP28.69■■■□□ 2.18
DDX56-207ENST00000448192 RICTORQ6R327 1708 aa28.69■■■□□ 2.18
DDX56-207ENST00000448192 TROQ12816 1431 aaPredicted RBP28.69■■■□□ 2.18
DDX56-207ENST00000448192 PLCH2O75038 1416 aa28.67■■■□□ 2.18
DDX56-207ENST00000448192 CCDC18Q5T9S5 1454 aa28.66■■■□□ 2.18
DDX56-207ENST00000448192 FYCO1Q9BQS8 1478 aa28.62■■■□□ 2.17
DDX56-207ENST00000448192 EFCAB2Q5VUJ9 269 aa28.59■■■□□ 2.17
DDX56-207ENST00000448192 SCAPERQ9BY12 1400 aa28.57■■■□□ 2.16
DDX56-207ENST00000448192 ARHGEF40Q8TER5 1519 aa28.57■■■□□ 2.16
DDX56-207ENST00000448192 ARHGAP5Q13017 1502 aa28.55■■■□□ 2.16
DDX56-207ENST00000448192 ZMYM4Q5VZL5 1548 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms