RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 ERCC6L2Q5T890 1561 aa17.06■□□□□ 0.32
CTDSPL-207ENST00000447745 SHROOM2Q13796 1616 aa17.05■□□□□ 0.32
CTDSPL-207ENST00000447745 KIAA0586Q9BVV6 1533 aa17.04■□□□□ 0.32
CTDSPL-207ENST00000447745 PRG4Q92954 1404 aaPredicted RBP17.04■□□□□ 0.32
CTDSPL-207ENST00000447745 CHIC1Q5VXU3 224 aa17.03■□□□□ 0.32
CTDSPL-207ENST00000447745 RAPGEF2Q9Y4G8 1499 aa17.03■□□□□ 0.32
CTDSPL-207ENST00000447745 CSRNP3Q8WYN3 585 aa16.98■□□□□ 0.31
CTDSPL-207ENST00000447745 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
CTDSPL-207ENST00000447745 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
CTDSPL-207ENST00000447745 EEA1Q15075 1411 aa16.92■□□□□ 0.3
CTDSPL-207ENST00000447745 IQGAP2Q13576 1575 aa16.91■□□□□ 0.3
CTDSPL-207ENST00000447745 TRHP20396 242 aaPredicted RBP16.89■□□□□ 0.29
CTDSPL-207ENST00000447745 CARMIL2Q6F5E8 1435 aa16.87■□□□□ 0.29
CTDSPL-207ENST00000447745 TTBK1Q5TCY1 1321 aaPredicted RBP16.85■□□□□ 0.29
CTDSPL-207ENST00000447745 PTPRGP23470 1445 aa16.84■□□□□ 0.29
CTDSPL-207ENST00000447745 DISP1Q96F81 1524 aa16.82■□□□□ 0.28
CTDSPL-207ENST00000447745 UGGT2Q9NYU1 1516 aa16.82■□□□□ 0.28
CTDSPL-207ENST00000447745 TNIKQ9UKE5 1360 aa16.82■□□□□ 0.28
CTDSPL-207ENST00000447745 CTTNBP2Q8WZ74 1663 aa16.81■□□□□ 0.28
CTDSPL-207ENST00000447745 NPM1P06748 294 aaKnown RBP eCLIP16.79■□□□□ 0.28
CTDSPL-207ENST00000447745 KIAA0556O60303 1618 aa16.74■□□□□ 0.27
CTDSPL-207ENST00000447745 ADCY10Q96PN6 1610 aa16.74■□□□□ 0.27
CTDSPL-207ENST00000447745 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
CTDSPL-207ENST00000447745 EHMT2Q96KQ7 1210 aa16.73■□□□□ 0.27
CTDSPL-207ENST00000447745 KIF21BO75037 1637 aa16.72■□□□□ 0.27
CTDSPL-207ENST00000447745 P3H3Q8IVL6 736 aa16.71■□□□□ 0.27
CTDSPL-207ENST00000447745 UACAQ9BZF9 1416 aa16.7■□□□□ 0.26
CTDSPL-207ENST00000447745 RANGAP1P46060 587 aaPredicted RBP16.7■□□□□ 0.26
CTDSPL-207ENST00000447745 UBTFP17480 764 aaKnown RBP16.69■□□□□ 0.26
CTDSPL-207ENST00000447745 UHRF1BP1LA0JNW5 1464 aa16.67■□□□□ 0.26
CTDSPL-207ENST00000447745 ABCC2Q92887 1545 aa16.65■□□□□ 0.26
CTDSPL-207ENST00000447745 MAPKBP1O60336 1514 aa16.64■□□□□ 0.25
CTDSPL-207ENST00000447745 FAM69CQ0P6D2 419 aa16.63■□□□□ 0.25
CTDSPL-207ENST00000447745 PLB1Q6P1J6 1458 aa16.62■□□□□ 0.25
CTDSPL-207ENST00000447745 SAMD9Q5K651 1589 aa16.61■□□□□ 0.25
CTDSPL-207ENST00000447745 ABCC10Q5T3U5 1492 aa16.61■□□□□ 0.25
CTDSPL-207ENST00000447745 KDM5BQ9UGL1 1544 aa16.6■□□□□ 0.25
CTDSPL-207ENST00000447745 ABCA8O94911 1581 aa16.58■□□□□ 0.24
CTDSPL-207ENST00000447745 KIF13AQ9H1H9 1805 aa16.58■□□□□ 0.24
CTDSPL-207ENST00000447745 ASXL2Q76L83 1435 aa16.57■□□□□ 0.24
CTDSPL-207ENST00000447745 FHOD3Q2V2M9 1422 aa16.55■□□□□ 0.24
CTDSPL-207ENST00000447745 DIP2BQ9P265 1576 aa16.55■□□□□ 0.24
CTDSPL-207ENST00000447745 ZCCHC11Q5TAX3 1644 aaKnown RBP16.54■□□□□ 0.24
CTDSPL-207ENST00000447745 ARID3CA6NKF2 412 aa16.53■□□□□ 0.24
CTDSPL-207ENST00000447745 EFCAB5A4FU69 1503 aa16.53■□□□□ 0.24
CTDSPL-207ENST00000447745 ATP10BO94823 1461 aa16.48■□□□□ 0.23
CTDSPL-207ENST00000447745 KCNH8Q96L42 1107 aa16.48■□□□□ 0.23
CTDSPL-207ENST00000447745 EPRSP07814 1512 aaKnown RBP16.47■□□□□ 0.23
CTDSPL-207ENST00000447745 RAPGEF6Q8TEU7 1601 aa16.47■□□□□ 0.23
CTDSPL-207ENST00000447745 ARHGAP35Q9NRY4 1499 aa16.47■□□□□ 0.23
CTDSPL-207ENST00000447745 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
CTDSPL-207ENST00000447745 HNRNPUL2Q1KMD3 747 aaKnown RBP16.46■□□□□ 0.23
CTDSPL-207ENST00000447745 WDR7Q9Y4E6 1490 aa16.46■□□□□ 0.23
CTDSPL-207ENST00000447745 GLI2P10070 1586 aa16.46■□□□□ 0.23
CTDSPL-207ENST00000447745 TSPOAP1O95153 1857 aa16.44■□□□□ 0.22
CTDSPL-207ENST00000447745 NUP153P49790 1475 aaKnown RBP16.43■□□□□ 0.22
CTDSPL-207ENST00000447745 ATP1B4Q9UN42 357 aaPredicted RBP16.41■□□□□ 0.22
CTDSPL-207ENST00000447745 FMN1Q68DA7 1419 aa16.4■□□□□ 0.22
CTDSPL-207ENST00000447745 LOC105371045A0A1W2PR82 267 aa16.37■□□□□ 0.21
CTDSPL-207ENST00000447745 PLEKHD1A6NEE1 506 aa16.37■□□□□ 0.21
CTDSPL-207ENST00000447745 CLIP1P30622 1438 aa16.36■□□□□ 0.21
CTDSPL-207ENST00000447745 MAP3K4Q9Y6R4 1608 aa16.36■□□□□ 0.21
CTDSPL-207ENST00000447745 CD109Q6YHK3 1445 aa16.36■□□□□ 0.21
CTDSPL-207ENST00000447745 PPRC1Q5VV67 1664 aaKnown RBP16.34■□□□□ 0.21
CTDSPL-207ENST00000447745 TEX14Q8IWB6 1497 aa16.31■□□□□ 0.2
CTDSPL-207ENST00000447745 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
CTDSPL-207ENST00000447745 KDM6BO15054 1643 aa16.3■□□□□ 0.2
CTDSPL-207ENST00000447745 CDK13Q14004 1512 aaKnown RBP16.3■□□□□ 0.2
CTDSPL-207ENST00000447745 HECW1Q76N89 1606 aa16.3■□□□□ 0.2
CTDSPL-207ENST00000447745 CDK11AQ9UQ88 783 aaPredicted RBP16.29■□□□□ 0.2
CTDSPL-207ENST00000447745 MAGI3Q5TCQ9 1506 aa16.29■□□□□ 0.2
CTDSPL-207ENST00000447745 CASKIN1Q8WXD9 1431 aa16.28■□□□□ 0.2
CTDSPL-207ENST00000447745 CEP162Q5TB80 1403 aa16.27■□□□□ 0.19
CTDSPL-207ENST00000447745 ABCA9Q8IUA7 1624 aa16.27■□□□□ 0.19
CTDSPL-207ENST00000447745 COL17A1Q9UMD9 1497 aaPredicted RBP16.26■□□□□ 0.19
CTDSPL-207ENST00000447745 PCF11O94913 1555 aaKnown RBP16.23■□□□□ 0.19
CTDSPL-207ENST00000447745 LRRIQ1Q96JM4 1722 aa16.21■□□□□ 0.19
CTDSPL-207ENST00000447745 FYCO1Q9BQS8 1478 aa16.21■□□□□ 0.19
CTDSPL-207ENST00000447745 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.2■□□□□ 0.18
CTDSPL-207ENST00000447745 CCDC18Q5T9S5 1454 aa16.19■□□□□ 0.18
CTDSPL-207ENST00000447745 PHLDB1Q86UU1 1377 aa16.19■□□□□ 0.18
CTDSPL-207ENST00000447745 TROQ12816 1431 aaPredicted RBP16.19■□□□□ 0.18
CTDSPL-207ENST00000447745 NEO1Q92859 1461 aa16.16■□□□□ 0.18
CTDSPL-207ENST00000447745 TTC37Q6PGP7 1564 aa16.16■□□□□ 0.18
CTDSPL-207ENST00000447745 ARAP3Q8WWN8 1544 aa16.15■□□□□ 0.18
CTDSPL-207ENST00000447745 PLCH2O75038 1416 aa16.13■□□□□ 0.17
CTDSPL-207ENST00000447745 RAPGEF3O95398 923 aa16.13■□□□□ 0.17
CTDSPL-207ENST00000447745 KIF14Q15058 1648 aa16.12■□□□□ 0.17
CTDSPL-207ENST00000447745 AKNAQ7Z591 1439 aa16.12■□□□□ 0.17
CTDSPL-207ENST00000447745 FANCAO15360 1455 aa16.12■□□□□ 0.17
CTDSPL-207ENST00000447745 EFCAB2Q5VUJ9 269 aa16.11■□□□□ 0.17
CTDSPL-207ENST00000447745 VPS8Q8N3P4 1428 aa16.07■□□□□ 0.16
CTDSPL-207ENST00000447745 DENND4BO75064 1496 aaPredicted RBP16.07■□□□□ 0.16
CTDSPL-207ENST00000447745 MYO5CQ9NQX4 1742 aa16.07■□□□□ 0.16
CTDSPL-207ENST00000447745 CFAP74Q9C0B2 1584 aa16.06■□□□□ 0.16
CTDSPL-207ENST00000447745 MTUS2Q5JR59 1369 aa16.06■□□□□ 0.16
CTDSPL-207ENST00000447745 SCAPERQ9BY12 1400 aa16.04■□□□□ 0.16
CTDSPL-207ENST00000447745 KDM4FA0A1W2PPD8 638 aa16.04■□□□□ 0.16
CTDSPL-207ENST00000447745 ARHGAP5Q13017 1502 aa16.04■□□□□ 0.16
CTDSPL-207ENST00000447745 ADGRL1O94910 1474 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms