RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 LOC105371045A0A1W2PR82 267 aa29.38■■■□□ 2.29
TRAPPC4-203ENST00000447216 UBTFP17480 764 aaKnown RBP29.35■■■□□ 2.29
TRAPPC4-203ENST00000447216 CLASP1Q7Z460 1538 aa29.35■■■□□ 2.29
TRAPPC4-203ENST00000447216 KIAA0586Q9BVV6 1533 aa29.3■■■□□ 2.28
TRAPPC4-203ENST00000447216 IQGAP2Q13576 1575 aa29.29■■■□□ 2.28
TRAPPC4-203ENST00000447216 TNIKQ9UKE5 1360 aa29.19■■■□□ 2.26
TRAPPC4-203ENST00000447216 SHROOM2Q13796 1616 aa29.19■■■□□ 2.26
TRAPPC4-203ENST00000447216 RANGAP1P46060 587 aaPredicted RBP29.17■■■□□ 2.26
TRAPPC4-203ENST00000447216 JPH4Q96JJ6 628 aa29.15■■■□□ 2.26
TRAPPC4-203ENST00000447216 UGGT2Q9NYU1 1516 aa29.11■■■□□ 2.25
TRAPPC4-203ENST00000447216 ERCC6L2Q5T890 1561 aa29.08■■■□□ 2.25
TRAPPC4-203ENST00000447216 PRG4Q92954 1404 aaPredicted RBP29.07■■■□□ 2.24
TRAPPC4-203ENST00000447216 DISP1Q96F81 1524 aa29.03■■■□□ 2.24
TRAPPC4-203ENST00000447216 SAMD9Q5K651 1589 aa29.01■■■□□ 2.24
TRAPPC4-203ENST00000447216 KIAA0556O60303 1618 aa29.01■■■□□ 2.23
TRAPPC4-203ENST00000447216 CEP162Q5TB80 1403 aa29■■■□□ 2.23
TRAPPC4-203ENST00000447216 P3H3Q8IVL6 736 aa28.98■■■□□ 2.23
TRAPPC4-203ENST00000447216 ARHGEF11O15085 1522 aa28.97■■■□□ 2.23
TRAPPC4-203ENST00000447216 CLIP1P30622 1438 aa28.96■■■□□ 2.23
TRAPPC4-203ENST00000447216 CARMIL2Q6F5E8 1435 aa28.96■■■□□ 2.23
TRAPPC4-203ENST00000447216 RIMBP3CA6NJZ7 1639 aa28.96■■■□□ 2.23
TRAPPC4-203ENST00000447216 RIMBP3BA6NNM3 1639 aa28.96■■■□□ 2.23
TRAPPC4-203ENST00000447216 RIMBP3Q9UFD9 1639 aa28.96■■■□□ 2.23
TRAPPC4-203ENST00000447216 EFCAB5A4FU69 1503 aa28.95■■■□□ 2.23
TRAPPC4-203ENST00000447216 ARHGAP35Q9NRY4 1499 aa28.95■■■□□ 2.22
TRAPPC4-203ENST00000447216 FHOD3Q2V2M9 1422 aa28.89■■■□□ 2.22
TRAPPC4-203ENST00000447216 DNAJC5Q9H3Z4 198 aa28.88■■■□□ 2.21
TRAPPC4-203ENST00000447216 TTBK1Q5TCY1 1321 aaPredicted RBP28.88■■■□□ 2.21
TRAPPC4-203ENST00000447216 ARAP1Q96P48 1450 aa28.83■■■□□ 2.21
TRAPPC4-203ENST00000447216 PTPRGP23470 1445 aa28.77■■■□□ 2.2
TRAPPC4-203ENST00000447216 CYB5RLQ6IPT4 315 aa28.67■■■□□ 2.18
TRAPPC4-203ENST00000447216 FMN1Q68DA7 1419 aa28.66■■■□□ 2.18
TRAPPC4-203ENST00000447216 PLB1Q6P1J6 1458 aa28.66■■■□□ 2.18
TRAPPC4-203ENST00000447216 ABCA8O94911 1581 aa28.64■■■□□ 2.18
TRAPPC4-203ENST00000447216 RAPGEF6Q8TEU7 1601 aa28.64■■■□□ 2.18
TRAPPC4-203ENST00000447216 PCF11O94913 1555 aaKnown RBP28.62■■■□□ 2.17
TRAPPC4-203ENST00000447216 UACAQ9BZF9 1416 aa28.6■■■□□ 2.17
TRAPPC4-203ENST00000447216 ADCY10Q96PN6 1610 aa28.59■■■□□ 2.17
TRAPPC4-203ENST00000447216 VPS8Q8N3P4 1428 aa28.58■■■□□ 2.17
TRAPPC4-203ENST00000447216 ABCC2Q92887 1545 aa28.56■■■□□ 2.16
TRAPPC4-203ENST00000447216 ATP1B4Q9UN42 357 aaPredicted RBP28.54■■■□□ 2.16
TRAPPC4-203ENST00000447216 LRRIQ1Q96JM4 1722 aa28.53■■■□□ 2.16
TRAPPC4-203ENST00000447216 UHRF1BP1LA0JNW5 1464 aa28.53■■■□□ 2.16
TRAPPC4-203ENST00000447216 CASKIN1Q8WXD9 1431 aa28.52■■■□□ 2.16
TRAPPC4-203ENST00000447216 HECW1Q76N89 1606 aa28.52■■■□□ 2.16
TRAPPC4-203ENST00000447216 ARID3CA6NKF2 412 aa28.5■■■□□ 2.15
TRAPPC4-203ENST00000447216 NUP153P49790 1475 aaKnown RBP28.5■■■□□ 2.15
TRAPPC4-203ENST00000447216 FYCO1Q9BQS8 1478 aa28.5■■■□□ 2.15
TRAPPC4-203ENST00000447216 ZCCHC11Q5TAX3 1644 aaKnown RBP28.44■■■□□ 2.14
TRAPPC4-203ENST00000447216 CDK13Q14004 1512 aaKnown RBP28.43■■■□□ 2.14
TRAPPC4-203ENST00000447216 EPRSP07814 1512 aaKnown RBP28.4■■■□□ 2.14
TRAPPC4-203ENST00000447216 KDM5BQ9UGL1 1544 aa28.4■■■□□ 2.14
TRAPPC4-203ENST00000447216 ATP10BO94823 1461 aa28.4■■■□□ 2.14
TRAPPC4-203ENST00000447216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.34■■■□□ 2.13
TRAPPC4-203ENST00000447216 HNRNPUL2Q1KMD3 747 aaKnown RBP28.34■■■□□ 2.13
TRAPPC4-203ENST00000447216 CCDC18Q5T9S5 1454 aa28.34■■■□□ 2.13
TRAPPC4-203ENST00000447216 CFAP43Q8NDM7 1665 aa28.33■■■□□ 2.13
TRAPPC4-203ENST00000447216 NPM1P06748 294 aaKnown RBP eCLIP28.33■■■□□ 2.13
TRAPPC4-203ENST00000447216 TIAM1Q13009 1591 aa28.29■■■□□ 2.12
TRAPPC4-203ENST00000447216 APLP2Q06481 763 aa28.23■■■□□ 2.11
TRAPPC4-203ENST00000447216 MAGI3Q5TCQ9 1506 aa28.23■■■□□ 2.11
TRAPPC4-203ENST00000447216 ASXL2Q76L83 1435 aa28.22■■■□□ 2.11
TRAPPC4-203ENST00000447216 MAPKBP1O60336 1514 aa28.21■■■□□ 2.11
TRAPPC4-203ENST00000447216 MAP3K1Q13233 1512 aa28.21■■■□□ 2.11
TRAPPC4-203ENST00000447216 PLEKHD1A6NEE1 506 aa28.17■■■□□ 2.1
TRAPPC4-203ENST00000447216 WDR7Q9Y4E6 1490 aa28.16■■■□□ 2.1
TRAPPC4-203ENST00000447216 CDK11AQ9UQ88 783 aaPredicted RBP28.16■■■□□ 2.1
TRAPPC4-203ENST00000447216 KANK4Q5T7N3 995 aaPredicted RBP28.15■■■□□ 2.1
TRAPPC4-203ENST00000447216 MTUS2Q5JR59 1369 aa28.13■■■□□ 2.09
TRAPPC4-203ENST00000447216 TROQ12816 1431 aaPredicted RBP28.13■■■□□ 2.09
TRAPPC4-203ENST00000447216 LRRC9Q6ZRR7 1453 aa28.13■■■□□ 2.09
TRAPPC4-203ENST00000447216 EHBP1L1Q8N3D4 1523 aa28.12■■■□□ 2.09
TRAPPC4-203ENST00000447216 PPARGC1BQ86YN6 1023 aaKnown RBP28.11■■■□□ 2.09
TRAPPC4-203ENST00000447216 KCNH8Q96L42 1107 aa28.11■■■□□ 2.09
TRAPPC4-203ENST00000447216 KIF14Q15058 1648 aa28.1■■■□□ 2.09
TRAPPC4-203ENST00000447216 KIF13AQ9H1H9 1805 aa28.04■■■□□ 2.08
TRAPPC4-203ENST00000447216 DIP2BQ9P265 1576 aa28.04■■■□□ 2.08
TRAPPC4-203ENST00000447216 SUPT6HQ7KZ85 1726 aaKnown RBP28.04■■■□□ 2.08
TRAPPC4-203ENST00000447216 ABCC10Q5T3U5 1492 aa28.01■■■□□ 2.07
TRAPPC4-203ENST00000447216 TTC37Q6PGP7 1564 aa27.99■■■□□ 2.07
TRAPPC4-203ENST00000447216 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.99■■■□□ 2.07
TRAPPC4-203ENST00000447216 ABCA9Q8IUA7 1624 aa27.96■■■□□ 2.07
TRAPPC4-203ENST00000447216 NCOA2Q15596 1464 aa27.95■■■□□ 2.07
TRAPPC4-203ENST00000447216 GLI2P10070 1586 aa27.95■■■□□ 2.07
TRAPPC4-203ENST00000447216 FAM69CQ0P6D2 419 aa27.95■■■□□ 2.06
TRAPPC4-203ENST00000447216 TSPOAP1O95153 1857 aa27.92■■■□□ 2.06
TRAPPC4-203ENST00000447216 CDC42BPAQ5VT25 1732 aa27.92■■■□□ 2.06
TRAPPC4-203ENST00000447216 MYO5CQ9NQX4 1742 aa27.91■■■□□ 2.06
TRAPPC4-203ENST00000447216 MAP3K4Q9Y6R4 1608 aa27.9■■■□□ 2.06
TRAPPC4-203ENST00000447216 TRHP20396 242 aaPredicted RBP27.89■■■□□ 2.06
TRAPPC4-203ENST00000447216 CDC42BPBQ9Y5S2 1711 aa27.86■■■□□ 2.05
TRAPPC4-203ENST00000447216 CCNB3Q8WWL7 1395 aa27.86■■■□□ 2.05
TRAPPC4-203ENST00000447216 CD109Q6YHK3 1445 aa27.84■■■□□ 2.05
TRAPPC4-203ENST00000447216 PREX2Q70Z35 1606 aa27.84■■■□□ 2.05
TRAPPC4-203ENST00000447216 ITSN2Q9NZM3 1697 aa27.84■■■□□ 2.05
TRAPPC4-203ENST00000447216 PHLDB1Q86UU1 1377 aa27.84■■■□□ 2.05
TRAPPC4-203ENST00000447216 GPATCH8Q9UKJ3 1502 aaKnown RBP27.82■■■□□ 2.04
TRAPPC4-203ENST00000447216 PPRC1Q5VV67 1664 aaKnown RBP27.81■■■□□ 2.04
TRAPPC4-203ENST00000447216 PLCH2O75038 1416 aa27.77■■■□□ 2.04
TRAPPC4-203ENST00000447216 MYOM3Q5VTT5 1437 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms