RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 IGF1RP08069 1367 aa31.74■■■□□ 2.67
COL9A1-205ENST00000447041 JPH4Q96JJ6 628 aa31.7■■■□□ 2.67
COL9A1-205ENST00000447041 KIAA0586Q9BVV6 1533 aa31.6■■■□□ 2.65
COL9A1-205ENST00000447041 CARMIL1Q5VZK9 1371 aa31.55■■■□□ 2.64
COL9A1-205ENST00000447041 ADCY10Q96PN6 1610 aa31.44■■■□□ 2.62
COL9A1-205ENST00000447041 KIF13AQ9H1H9 1805 aa31.43■■■□□ 2.62
COL9A1-205ENST00000447041 IQGAP2Q13576 1575 aa31.38■■■□□ 2.61
COL9A1-205ENST00000447041 MAPKBP1O60336 1514 aa31.33■■■□□ 2.61
COL9A1-205ENST00000447041 RAPGEF2Q9Y4G8 1499 aa31.3■■■□□ 2.6
COL9A1-205ENST00000447041 NPM1P06748 294 aaKnown RBP eCLIP31.28■■■□□ 2.6
COL9A1-205ENST00000447041 CARMIL2Q6F5E8 1435 aa31.26■■■□□ 2.6
COL9A1-205ENST00000447041 ABCC10Q5T3U5 1492 aa31.26■■■□□ 2.59
COL9A1-205ENST00000447041 PTPRGP23470 1445 aa31.25■■■□□ 2.59
COL9A1-205ENST00000447041 DIP2BQ9P265 1576 aa31.25■■■□□ 2.59
COL9A1-205ENST00000447041 TNIKQ9UKE5 1360 aa31.23■■■□□ 2.59
COL9A1-205ENST00000447041 TTBK1Q5TCY1 1321 aaPredicted RBP31.22■■■□□ 2.59
COL9A1-205ENST00000447041 DISP1Q96F81 1524 aa31.21■■■□□ 2.59
COL9A1-205ENST00000447041 FAM69CQ0P6D2 419 aa31.18■■■□□ 2.58
COL9A1-205ENST00000447041 UGGT2Q9NYU1 1516 aa31.16■■■□□ 2.58
COL9A1-205ENST00000447041 CTTNBP2Q8WZ74 1663 aa31.13■■■□□ 2.57
COL9A1-205ENST00000447041 KIAA0556O60303 1618 aa31.11■■■□□ 2.57
COL9A1-205ENST00000447041 ABCC2Q92887 1545 aa31.11■■■□□ 2.57
COL9A1-205ENST00000447041 UHRF1BP1LA0JNW5 1464 aa31.06■■■□□ 2.56
COL9A1-205ENST00000447041 UACAQ9BZF9 1416 aa31.04■■■□□ 2.56
COL9A1-205ENST00000447041 PRXQ9BXM0 1461 aa31.03■■■□□ 2.56
COL9A1-205ENST00000447041 TSPOAP1O95153 1857 aa31.01■■■□□ 2.55
COL9A1-205ENST00000447041 ASXL2Q76L83 1435 aa30.98■■■□□ 2.55
COL9A1-205ENST00000447041 PLB1Q6P1J6 1458 aa30.94■■■□□ 2.54
COL9A1-205ENST00000447041 KDM5BQ9UGL1 1544 aa30.93■■■□□ 2.54
COL9A1-205ENST00000447041 ZCCHC11Q5TAX3 1644 aaKnown RBP30.92■■■□□ 2.54
COL9A1-205ENST00000447041 KDM6BO15054 1643 aa30.91■■■□□ 2.54
COL9A1-205ENST00000447041 GOLGA3Q08378 1498 aa30.89■■■□□ 2.53
COL9A1-205ENST00000447041 GLI2P10070 1586 aa30.88■■■□□ 2.53
COL9A1-205ENST00000447041 AEBP2Q6ZN18 517 aaPredicted RBP30.88■■■□□ 2.53
COL9A1-205ENST00000447041 PPRC1Q5VV67 1664 aaKnown RBP30.85■■■□□ 2.53
COL9A1-205ENST00000447041 EPRSP07814 1512 aaKnown RBP30.81■■■□□ 2.52
COL9A1-205ENST00000447041 ABCA8O94911 1581 aa30.79■■■□□ 2.52
COL9A1-205ENST00000447041 CSRNP3Q8WYN3 585 aa30.77■■■□□ 2.52
COL9A1-205ENST00000447041 MAP3K4Q9Y6R4 1608 aa30.76■■■□□ 2.52
COL9A1-205ENST00000447041 WDR7Q9Y4E6 1490 aa30.72■■■□□ 2.51
COL9A1-205ENST00000447041 EEA1Q15075 1411 aa30.7■■■□□ 2.5
COL9A1-205ENST00000447041 SAMD9Q5K651 1589 aa30.66■■■□□ 2.5
COL9A1-205ENST00000447041 P3H3Q8IVL6 736 aa30.64■■■□□ 2.5
COL9A1-205ENST00000447041 TEX14Q8IWB6 1497 aa30.6■■■□□ 2.49
COL9A1-205ENST00000447041 FAM9AQ8IZU1 332 aaPredicted RBP30.58■■■□□ 2.49
COL9A1-205ENST00000447041 COL17A1Q9UMD9 1497 aaPredicted RBP30.57■■■□□ 2.48
COL9A1-205ENST00000447041 CFAP43Q8NDM7 1665 aa30.55■■■□□ 2.48
COL9A1-205ENST00000447041 KIF21BO75037 1637 aa30.52■■■□□ 2.48
COL9A1-205ENST00000447041 ARID3CA6NKF2 412 aa30.51■■■□□ 2.47
COL9A1-205ENST00000447041 RAPGEF6Q8TEU7 1601 aa30.51■■■□□ 2.47
COL9A1-205ENST00000447041 KCNH8Q96L42 1107 aa30.5■■■□□ 2.47
COL9A1-205ENST00000447041 ATP10BO94823 1461 aa30.5■■■□□ 2.47
COL9A1-205ENST00000447041 CD109Q6YHK3 1445 aa30.47■■■□□ 2.47
COL9A1-205ENST00000447041 KDM4FA0A1W2PPD8 638 aa30.47■■■□□ 2.47
COL9A1-205ENST00000447041 RANGAP1P46060 587 aaPredicted RBP30.47■■■□□ 2.47
COL9A1-205ENST00000447041 MAGI3Q5TCQ9 1506 aa30.47■■■□□ 2.47
COL9A1-205ENST00000447041 FHOD3Q2V2M9 1422 aa30.45■■■□□ 2.46
COL9A1-205ENST00000447041 NUP153P49790 1475 aaKnown RBP30.38■■■□□ 2.45
COL9A1-205ENST00000447041 CHIC1Q5VXU3 224 aa30.37■■■□□ 2.45
COL9A1-205ENST00000447041 EFCAB5A4FU69 1503 aa30.36■■■□□ 2.45
COL9A1-205ENST00000447041 ABCA9Q8IUA7 1624 aa30.35■■■□□ 2.45
COL9A1-205ENST00000447041 ADGRL1O94910 1474 aa30.31■■■□□ 2.44
COL9A1-205ENST00000447041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.28■■■□□ 2.44
COL9A1-205ENST00000447041 HNRNPUL2Q1KMD3 747 aaKnown RBP30.28■■■□□ 2.44
COL9A1-205ENST00000447041 EHMT2Q96KQ7 1210 aa30.28■■■□□ 2.44
COL9A1-205ENST00000447041 ARAP3Q8WWN8 1544 aa30.22■■■□□ 2.43
COL9A1-205ENST00000447041 UBTFP17480 764 aaKnown RBP30.19■■■□□ 2.42
COL9A1-205ENST00000447041 NEO1Q92859 1461 aa30.12■■■□□ 2.41
COL9A1-205ENST00000447041 ARHGAP35Q9NRY4 1499 aa30.12■■■□□ 2.41
COL9A1-205ENST00000447041 CDK13Q14004 1512 aaKnown RBP30.12■■■□□ 2.41
COL9A1-205ENST00000447041 PHLDB1Q86UU1 1377 aa30.11■■■□□ 2.41
COL9A1-205ENST00000447041 PLEKHD1A6NEE1 506 aa30.09■■■□□ 2.41
COL9A1-205ENST00000447041 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.08■■■□□ 2.41
COL9A1-205ENST00000447041 TTC37Q6PGP7 1564 aa30.07■■■□□ 2.4
COL9A1-205ENST00000447041 FRMPD1Q5SYB0 1578 aa30.07■■■□□ 2.4
COL9A1-205ENST00000447041 HECW1Q76N89 1606 aa30.06■■■□□ 2.4
COL9A1-205ENST00000447041 FMN1Q68DA7 1419 aa30.05■■■□□ 2.4
COL9A1-205ENST00000447041 RAPGEF3O95398 923 aa30.03■■■□□ 2.4
COL9A1-205ENST00000447041 CFAP74Q9C0B2 1584 aa29.99■■■□□ 2.39
COL9A1-205ENST00000447041 FANCAO15360 1455 aa29.97■■■□□ 2.39
COL9A1-205ENST00000447041 ATP1B4Q9UN42 357 aaPredicted RBP29.95■■■□□ 2.39
COL9A1-205ENST00000447041 RICTORQ6R327 1708 aa29.95■■■□□ 2.38
COL9A1-205ENST00000447041 AKNAQ7Z591 1439 aa29.94■■■□□ 2.38
COL9A1-205ENST00000447041 LRRIQ1Q96JM4 1722 aa29.93■■■□□ 2.38
COL9A1-205ENST00000447041 DENND4BO75064 1496 aaPredicted RBP29.91■■■□□ 2.38
COL9A1-205ENST00000447041 ARHGEF40Q8TER5 1519 aa29.89■■■□□ 2.38
COL9A1-205ENST00000447041 HECW2Q9P2P5 1572 aa29.87■■■□□ 2.37
COL9A1-205ENST00000447041 KIF14Q15058 1648 aa29.87■■■□□ 2.37
COL9A1-205ENST00000447041 PCF11O94913 1555 aaKnown RBP29.85■■■□□ 2.37
COL9A1-205ENST00000447041 ADAMTSL3P82987 1691 aa29.85■■■□□ 2.37
COL9A1-205ENST00000447041 MYO5CQ9NQX4 1742 aa29.84■■■□□ 2.37
COL9A1-205ENST00000447041 PLCH2O75038 1416 aa29.83■■■□□ 2.37
COL9A1-205ENST00000447041 ZMYM4Q5VZL5 1548 aa29.82■■■□□ 2.36
COL9A1-205ENST00000447041 BCORL1Q5H9F3 1711 aa29.82■■■□□ 2.36
COL9A1-205ENST00000447041 TROQ12816 1431 aaPredicted RBP29.8■■■□□ 2.36
COL9A1-205ENST00000447041 CDK11AQ9UQ88 783 aaPredicted RBP29.79■■■□□ 2.36
COL9A1-205ENST00000447041 ZFYVE16Q7Z3T8 1539 aa29.76■■■□□ 2.35
COL9A1-205ENST00000447041 POGZQ7Z3K3 1410 aa29.75■■■□□ 2.35
COL9A1-205ENST00000447041 CASKIN1Q8WXD9 1431 aa29.75■■■□□ 2.35
COL9A1-205ENST00000447041 MADDQ8WXG6 1647 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms