RNA–Protein interactions for RNA: ENST00000446553.2

CDCA3-203, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-203ENST00000446553 TRHP20396 242 aaPredicted RBP19.48■□□□□ 0.71
CDCA3-203ENST00000446553 PRG4Q92954 1404 aaPredicted RBP19.48■□□□□ 0.71
CDCA3-203ENST00000446553 KIAA0586Q9BVV6 1533 aa19.47■□□□□ 0.71
CDCA3-203ENST00000446553 CARMIL1Q5VZK9 1371 aa19.44■□□□□ 0.7
CDCA3-203ENST00000446553 RAPGEF2Q9Y4G8 1499 aa19.3■□□□□ 0.68
CDCA3-203ENST00000446553 IQGAP2Q13576 1575 aa19.28■□□□□ 0.68
CDCA3-203ENST00000446553 CARMIL2Q6F5E8 1435 aa19.26■□□□□ 0.67
CDCA3-203ENST00000446553 ADCY10Q96PN6 1610 aa19.23■□□□□ 0.67
CDCA3-203ENST00000446553 NPM1P06748 294 aaKnown RBP eCLIP19.23■□□□□ 0.67
CDCA3-203ENST00000446553 MAPKBP1O60336 1514 aa19.23■□□□□ 0.67
CDCA3-203ENST00000446553 TNIKQ9UKE5 1360 aa19.22■□□□□ 0.67
CDCA3-203ENST00000446553 PTPRGP23470 1445 aa19.22■□□□□ 0.67
CDCA3-203ENST00000446553 UGGT2Q9NYU1 1516 aa19.2■□□□□ 0.66
CDCA3-203ENST00000446553 KIF13AQ9H1H9 1805 aa19.18■□□□□ 0.66
CDCA3-203ENST00000446553 PRXQ9BXM0 1461 aa19.18■□□□□ 0.66
CDCA3-203ENST00000446553 ABCC10Q5T3U5 1492 aa19.17■□□□□ 0.66
CDCA3-203ENST00000446553 DISP1Q96F81 1524 aa19.17■□□□□ 0.66
CDCA3-203ENST00000446553 UHRF1BP1LA0JNW5 1464 aa19.14■□□□□ 0.65
CDCA3-203ENST00000446553 CTTNBP2Q8WZ74 1663 aa19.11■□□□□ 0.65
CDCA3-203ENST00000446553 ABCC2Q92887 1545 aa19.11■□□□□ 0.65
CDCA3-203ENST00000446553 DIP2BQ9P265 1576 aa19.1■□□□□ 0.65
CDCA3-203ENST00000446553 KIAA0556O60303 1618 aa19.1■□□□□ 0.65
CDCA3-203ENST00000446553 UACAQ9BZF9 1416 aa19.09■□□□□ 0.65
CDCA3-203ENST00000446553 FAM69CQ0P6D2 419 aa19.08■□□□□ 0.64
CDCA3-203ENST00000446553 EEA1Q15075 1411 aa19.08■□□□□ 0.64
CDCA3-203ENST00000446553 GOLGA3Q08378 1498 aa19.07■□□□□ 0.64
CDCA3-203ENST00000446553 PLB1Q6P1J6 1458 aa19.04■□□□□ 0.64
CDCA3-203ENST00000446553 CSRNP3Q8WYN3 585 aa19.04■□□□□ 0.64
CDCA3-203ENST00000446553 KDM5BQ9UGL1 1544 aa19.04■□□□□ 0.64
CDCA3-203ENST00000446553 ASXL2Q76L83 1435 aa19■□□□□ 0.63
CDCA3-203ENST00000446553 TTBK1Q5TCY1 1321 aaPredicted RBP19■□□□□ 0.63
CDCA3-203ENST00000446553 GLI2P10070 1586 aa18.98■□□□□ 0.63
CDCA3-203ENST00000446553 ZCCHC11Q5TAX3 1644 aaKnown RBP18.93■□□□□ 0.62
CDCA3-203ENST00000446553 ABCA8O94911 1581 aa18.93■□□□□ 0.62
CDCA3-203ENST00000446553 EPRSP07814 1512 aaKnown RBP18.9■□□□□ 0.62
CDCA3-203ENST00000446553 FAM9AQ8IZU1 332 aaPredicted RBP18.89■□□□□ 0.61
CDCA3-203ENST00000446553 SAMD9Q5K651 1589 aa18.89■□□□□ 0.61
CDCA3-203ENST00000446553 TSPOAP1O95153 1857 aa18.88■□□□□ 0.61
CDCA3-203ENST00000446553 KDM6BO15054 1643 aa18.86■□□□□ 0.61
CDCA3-203ENST00000446553 KIF21BO75037 1637 aa18.86■□□□□ 0.61
CDCA3-203ENST00000446553 WDR7Q9Y4E6 1490 aa18.86■□□□□ 0.61
CDCA3-203ENST00000446553 PPRC1Q5VV67 1664 aaKnown RBP18.85■□□□□ 0.61
CDCA3-203ENST00000446553 MAP3K4Q9Y6R4 1608 aa18.85■□□□□ 0.61
CDCA3-203ENST00000446553 CHIC1Q5VXU3 224 aa18.83■□□□□ 0.6
CDCA3-203ENST00000446553 TEX14Q8IWB6 1497 aa18.81■□□□□ 0.6
CDCA3-203ENST00000446553 EFCAB5A4FU69 1503 aa18.76■□□□□ 0.59
CDCA3-203ENST00000446553 AEBP2Q6ZN18 517 aaPredicted RBP18.76■□□□□ 0.59
CDCA3-203ENST00000446553 P3H3Q8IVL6 736 aa18.76■□□□□ 0.59
CDCA3-203ENST00000446553 ATP10BO94823 1461 aa18.76■□□□□ 0.59
CDCA3-203ENST00000446553 CFAP43Q8NDM7 1665 aa18.76■□□□□ 0.59
CDCA3-203ENST00000446553 MAGI3Q5TCQ9 1506 aa18.74■□□□□ 0.59
CDCA3-203ENST00000446553 RAPGEF6Q8TEU7 1601 aa18.74■□□□□ 0.59
CDCA3-203ENST00000446553 CD109Q6YHK3 1445 aa18.72■□□□□ 0.59
CDCA3-203ENST00000446553 FHOD3Q2V2M9 1422 aa18.69■□□□□ 0.58
CDCA3-203ENST00000446553 COL17A1Q9UMD9 1497 aaPredicted RBP18.69■□□□□ 0.58
CDCA3-203ENST00000446553 KCNH8Q96L42 1107 aa18.68■□□□□ 0.58
CDCA3-203ENST00000446553 NUP153P49790 1475 aaKnown RBP18.68■□□□□ 0.58
CDCA3-203ENST00000446553 ABCA9Q8IUA7 1624 aa18.64■□□□□ 0.57
CDCA3-203ENST00000446553 UBTFP17480 764 aaKnown RBP18.63■□□□□ 0.57
CDCA3-203ENST00000446553 PHLDB1Q86UU1 1377 aa18.63■□□□□ 0.57
CDCA3-203ENST00000446553 ARID3CA6NKF2 412 aa18.6■□□□□ 0.57
CDCA3-203ENST00000446553 RANGAP1P46060 587 aaPredicted RBP18.6■□□□□ 0.57
CDCA3-203ENST00000446553 ARAP3Q8WWN8 1544 aa18.59■□□□□ 0.57
CDCA3-203ENST00000446553 FMN1Q68DA7 1419 aa18.58■□□□□ 0.57
CDCA3-203ENST00000446553 KDM4FA0A1W2PPD8 638 aa18.57■□□□□ 0.56
CDCA3-203ENST00000446553 PLEKHD1A6NEE1 506 aa18.57■□□□□ 0.56
CDCA3-203ENST00000446553 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.56■□□□□ 0.56
CDCA3-203ENST00000446553 HNRNPUL2Q1KMD3 747 aaKnown RBP18.56■□□□□ 0.56
CDCA3-203ENST00000446553 NEO1Q92859 1461 aa18.56■□□□□ 0.56
CDCA3-203ENST00000446553 ARHGAP35Q9NRY4 1499 aa18.56■□□□□ 0.56
CDCA3-203ENST00000446553 HECW1Q76N89 1606 aa18.5■□□□□ 0.55
CDCA3-203ENST00000446553 ADGRL1O94910 1474 aa18.47■□□□□ 0.55
CDCA3-203ENST00000446553 CDK13Q14004 1512 aaKnown RBP18.46■□□□□ 0.55
CDCA3-203ENST00000446553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.46■□□□□ 0.55
CDCA3-203ENST00000446553 EHMT2Q96KQ7 1210 aa18.46■□□□□ 0.55
CDCA3-203ENST00000446553 CDK11AQ9UQ88 783 aaPredicted RBP18.45■□□□□ 0.54
CDCA3-203ENST00000446553 CFAP74Q9C0B2 1584 aa18.44■□□□□ 0.54
CDCA3-203ENST00000446553 TTC37Q6PGP7 1564 aa18.42■□□□□ 0.54
CDCA3-203ENST00000446553 FANCAO15360 1455 aa18.41■□□□□ 0.54
CDCA3-203ENST00000446553 AKNAQ7Z591 1439 aa18.4■□□□□ 0.54
CDCA3-203ENST00000446553 PLCH2O75038 1416 aa18.39■□□□□ 0.53
CDCA3-203ENST00000446553 CASKIN1Q8WXD9 1431 aa18.39■□□□□ 0.53
CDCA3-203ENST00000446553 DENND4BO75064 1496 aaPredicted RBP18.39■□□□□ 0.53
CDCA3-203ENST00000446553 FRMPD1Q5SYB0 1578 aa18.38■□□□□ 0.53
CDCA3-203ENST00000446553 RAPGEF3O95398 923 aa18.38■□□□□ 0.53
CDCA3-203ENST00000446553 TROQ12816 1431 aaPredicted RBP18.38■□□□□ 0.53
CDCA3-203ENST00000446553 CCDC18Q5T9S5 1454 aa18.36■□□□□ 0.53
CDCA3-203ENST00000446553 RICTORQ6R327 1708 aa18.36■□□□□ 0.53
CDCA3-203ENST00000446553 ATP1B4Q9UN42 357 aaPredicted RBP18.36■□□□□ 0.53
CDCA3-203ENST00000446553 CLIP1P30622 1438 aa18.35■□□□□ 0.53
CDCA3-203ENST00000446553 LRRIQ1Q96JM4 1722 aa18.34■□□□□ 0.53
CDCA3-203ENST00000446553 KIF14Q15058 1648 aa18.34■□□□□ 0.53
CDCA3-203ENST00000446553 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.53
CDCA3-203ENST00000446553 FYCO1Q9BQS8 1478 aa18.33■□□□□ 0.53
CDCA3-203ENST00000446553 MYO5CQ9NQX4 1742 aa18.32■□□□□ 0.52
CDCA3-203ENST00000446553 PCF11O94913 1555 aaKnown RBP18.32■□□□□ 0.52
CDCA3-203ENST00000446553 MAGI2Q86UL8 1455 aa18.32■□□□□ 0.52
CDCA3-203ENST00000446553 ARHGEF40Q8TER5 1519 aa18.3■□□□□ 0.52
CDCA3-203ENST00000446553 EFCAB2Q5VUJ9 269 aa18.3■□□□□ 0.52
CDCA3-203ENST00000446553 POGZQ7Z3K3 1410 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms