RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 TTBK1Q5TCY1 1321 aaPredicted RBP12.3□□□□□ -0.44
SF3A3P1-201ENST00000446317 GOLGA3Q08378 1498 aa12.3□□□□□ -0.44
SF3A3P1-201ENST00000446317 KIF21BO75037 1637 aa12.3□□□□□ -0.44
SF3A3P1-201ENST00000446317 CEP170Q5SW79 1584 aa12.29□□□□□ -0.44
SF3A3P1-201ENST00000446317 P3H3Q8IVL6 736 aa12.27□□□□□ -0.45
SF3A3P1-201ENST00000446317 OSCARQ8IYS5 282 aa12.23□□□□□ -0.45
SF3A3P1-201ENST00000446317 NUP160Q12769 1436 aa12.2□□□□□ -0.46
SF3A3P1-201ENST00000446317 CTTNBP2Q8WZ74 1663 aa12.2□□□□□ -0.46
SF3A3P1-201ENST00000446317 IQGAP2Q13576 1575 aa12.18□□□□□ -0.46
SF3A3P1-201ENST00000446317 ERCC6L2Q5T890 1561 aa12.18□□□□□ -0.46
SF3A3P1-201ENST00000446317 TNIKQ9UKE5 1360 aa12.17□□□□□ -0.46
SF3A3P1-201ENST00000446317 CLASP1Q7Z460 1538 aa12.16□□□□□ -0.46
SF3A3P1-201ENST00000446317 KIAA0586Q9BVV6 1533 aa12.16□□□□□ -0.46
SF3A3P1-201ENST00000446317 JPH4Q96JJ6 628 aa12.16□□□□□ -0.46
SF3A3P1-201ENST00000446317 CEP162Q5TB80 1403 aa12.15□□□□□ -0.46
SF3A3P1-201ENST00000446317 FHOD3Q2V2M9 1422 aa12.13□□□□□ -0.47
SF3A3P1-201ENST00000446317 PRG4Q92954 1404 aaPredicted RBP12.13□□□□□ -0.47
SF3A3P1-201ENST00000446317 CLIP1P30622 1438 aa12.13□□□□□ -0.47
SF3A3P1-201ENST00000446317 ARID3CA6NKF2 412 aa12.12□□□□□ -0.47
SF3A3P1-201ENST00000446317 ATP1B4Q9UN42 357 aaPredicted RBP12.1□□□□□ -0.47
SF3A3P1-201ENST00000446317 ARHGAP35Q9NRY4 1499 aa12.1□□□□□ -0.47
SF3A3P1-201ENST00000446317 DISP1Q96F81 1524 aa12.09□□□□□ -0.47
SF3A3P1-201ENST00000446317 UGGT2Q9NYU1 1516 aa12.07□□□□□ -0.48
SF3A3P1-201ENST00000446317 ARAP1Q96P48 1450 aa12.07□□□□□ -0.48
SF3A3P1-201ENST00000446317 KIAA0556O60303 1618 aa12.07□□□□□ -0.48
SF3A3P1-201ENST00000446317 SHROOM2Q13796 1616 aa12.06□□□□□ -0.48
SF3A3P1-201ENST00000446317 SAMD9Q5K651 1589 aa12.04□□□□□ -0.48
SF3A3P1-201ENST00000446317 PPARGC1BQ86YN6 1023 aaKnown RBP12.04□□□□□ -0.48
SF3A3P1-201ENST00000446317 ARHGEF11O15085 1522 aa12.04□□□□□ -0.48
SF3A3P1-201ENST00000446317 RIMBP3CA6NJZ7 1639 aa12.04□□□□□ -0.48
SF3A3P1-201ENST00000446317 RIMBP3BA6NNM3 1639 aa12.04□□□□□ -0.48
SF3A3P1-201ENST00000446317 RIMBP3Q9UFD9 1639 aa12.04□□□□□ -0.48
SF3A3P1-201ENST00000446317 CARMIL2Q6F5E8 1435 aa12.03□□□□□ -0.48
SF3A3P1-201ENST00000446317 CYB5RLQ6IPT4 315 aa12.03□□□□□ -0.48
SF3A3P1-201ENST00000446317 EFCAB5A4FU69 1503 aa12□□□□□ -0.49
SF3A3P1-201ENST00000446317 PTPRGP23470 1445 aa12□□□□□ -0.49
SF3A3P1-201ENST00000446317 PLB1Q6P1J6 1458 aa12□□□□□ -0.49
SF3A3P1-201ENST00000446317 DNAJC5Q9H3Z4 198 aa11.97□□□□□ -0.49
SF3A3P1-201ENST00000446317 PCF11O94913 1555 aaKnown RBP11.97□□□□□ -0.49
SF3A3P1-201ENST00000446317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.96□□□□□ -0.49
SF3A3P1-201ENST00000446317 HNRNPUL2Q1KMD3 747 aaKnown RBP11.96□□□□□ -0.49
SF3A3P1-201ENST00000446317 VPS8Q8N3P4 1428 aa11.93□□□□□ -0.5
SF3A3P1-201ENST00000446317 CDK13Q14004 1512 aaKnown RBP11.92□□□□□ -0.5
SF3A3P1-201ENST00000446317 FMN1Q68DA7 1419 aa11.91□□□□□ -0.5
SF3A3P1-201ENST00000446317 RAPGEF6Q8TEU7 1601 aa11.91□□□□□ -0.5
SF3A3P1-201ENST00000446317 UACAQ9BZF9 1416 aa11.9□□□□□ -0.5
SF3A3P1-201ENST00000446317 ADCY10Q96PN6 1610 aa11.9□□□□□ -0.51
SF3A3P1-201ENST00000446317 ABCA8O94911 1581 aa11.9□□□□□ -0.51
SF3A3P1-201ENST00000446317 NUP153P49790 1475 aaKnown RBP11.89□□□□□ -0.51
SF3A3P1-201ENST00000446317 LRRIQ1Q96JM4 1722 aa11.88□□□□□ -0.51
SF3A3P1-201ENST00000446317 CASKIN1Q8WXD9 1431 aa11.87□□□□□ -0.51
SF3A3P1-201ENST00000446317 KANK4Q5T7N3 995 aaPredicted RBP11.86□□□□□ -0.51
SF3A3P1-201ENST00000446317 ABCC2Q92887 1545 aa11.86□□□□□ -0.51
SF3A3P1-201ENST00000446317 FYCO1Q9BQS8 1478 aa11.86□□□□□ -0.51
SF3A3P1-201ENST00000446317 HECW1Q76N89 1606 aa11.86□□□□□ -0.51
SF3A3P1-201ENST00000446317 APLP2Q06481 763 aa11.85□□□□□ -0.51
SF3A3P1-201ENST00000446317 ATP10BO94823 1461 aa11.84□□□□□ -0.51
SF3A3P1-201ENST00000446317 KCNH8Q96L42 1107 aa11.84□□□□□ -0.51
SF3A3P1-201ENST00000446317 EPRSP07814 1512 aaKnown RBP11.84□□□□□ -0.51
SF3A3P1-201ENST00000446317 ZCCHC11Q5TAX3 1644 aaKnown RBP11.84□□□□□ -0.51
SF3A3P1-201ENST00000446317 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
SF3A3P1-201ENST00000446317 MAGI3Q5TCQ9 1506 aa11.81□□□□□ -0.52
SF3A3P1-201ENST00000446317 UHRF1BP1LA0JNW5 1464 aa11.8□□□□□ -0.52
SF3A3P1-201ENST00000446317 TIAM1Q13009 1591 aa11.8□□□□□ -0.52
SF3A3P1-201ENST00000446317 MTUS2Q5JR59 1369 aa11.77□□□□□ -0.52
SF3A3P1-201ENST00000446317 KDM5BQ9UGL1 1544 aa11.77□□□□□ -0.52
SF3A3P1-201ENST00000446317 ASXL2Q76L83 1435 aa11.77□□□□□ -0.53
SF3A3P1-201ENST00000446317 CFAP43Q8NDM7 1665 aa11.77□□□□□ -0.53
SF3A3P1-201ENST00000446317 PLEKHD1A6NEE1 506 aa11.76□□□□□ -0.53
SF3A3P1-201ENST00000446317 CCDC18Q5T9S5 1454 aa11.76□□□□□ -0.53
SF3A3P1-201ENST00000446317 KIF14Q15058 1648 aa11.75□□□□□ -0.53
SF3A3P1-201ENST00000446317 LRRC9Q6ZRR7 1453 aa11.75□□□□□ -0.53
SF3A3P1-201ENST00000446317 TRHP20396 242 aaPredicted RBP11.73□□□□□ -0.53
SF3A3P1-201ENST00000446317 CDK11AQ9UQ88 783 aaPredicted RBP11.72□□□□□ -0.53
SF3A3P1-201ENST00000446317 WDR7Q9Y4E6 1490 aa11.72□□□□□ -0.53
SF3A3P1-201ENST00000446317 TROQ12816 1431 aaPredicted RBP11.71□□□□□ -0.53
SF3A3P1-201ENST00000446317 FAM69CQ0P6D2 419 aa11.7□□□□□ -0.54
SF3A3P1-201ENST00000446317 EHBP1L1Q8N3D4 1523 aa11.69□□□□□ -0.54
SF3A3P1-201ENST00000446317 ZNF777Q9ULD5 760 aaPredicted RBP11.69□□□□□ -0.54
SF3A3P1-201ENST00000446317 NCOA2Q15596 1464 aa11.69□□□□□ -0.54
SF3A3P1-201ENST00000446317 TTC37Q6PGP7 1564 aa11.69□□□□□ -0.54
SF3A3P1-201ENST00000446317 PHLDB1Q86UU1 1377 aa11.68□□□□□ -0.54
SF3A3P1-201ENST00000446317 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.66□□□□□ -0.54
SF3A3P1-201ENST00000446317 MAPKBP1O60336 1514 aa11.66□□□□□ -0.54
SF3A3P1-201ENST00000446317 MAP3K1Q13233 1512 aa11.66□□□□□ -0.54
SF3A3P1-201ENST00000446317 SUPT6HQ7KZ85 1726 aaKnown RBP11.65□□□□□ -0.54
SF3A3P1-201ENST00000446317 ITGAEP38570 1179 aa11.65□□□□□ -0.54
SF3A3P1-201ENST00000446317 FOXD1Q16676 465 aa11.65□□□□□ -0.54
SF3A3P1-201ENST00000446317 CCNB3Q8WWL7 1395 aa11.65□□□□□ -0.55
SF3A3P1-201ENST00000446317 ZNF644Q9H582 1327 aaPredicted RBP11.65□□□□□ -0.55
SF3A3P1-201ENST00000446317 FAM50AQ14320 339 aaKnown RBP11.64□□□□□ -0.55
SF3A3P1-201ENST00000446317 DIP2BQ9P265 1576 aa11.64□□□□□ -0.55
SF3A3P1-201ENST00000446317 TSPOAP1O95153 1857 aa11.63□□□□□ -0.55
SF3A3P1-201ENST00000446317 ABCC10Q5T3U5 1492 aa11.63□□□□□ -0.55
SF3A3P1-201ENST00000446317 CD109Q6YHK3 1445 aa11.61□□□□□ -0.55
SF3A3P1-201ENST00000446317 CFDP1Q9UEE9 299 aaPredicted RBP11.61□□□□□ -0.55
SF3A3P1-201ENST00000446317 ARHGAP5Q13017 1502 aa11.61□□□□□ -0.55
SF3A3P1-201ENST00000446317 GPATCH8Q9UKJ3 1502 aaKnown RBP11.61□□□□□ -0.55
SF3A3P1-201ENST00000446317 KIF13AQ9H1H9 1805 aa11.59□□□□□ -0.55
SF3A3P1-201ENST00000446317 CDC42BPAQ5VT25 1732 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 220.3 ms