RNA–Protein interactions for RNA: ENST00000446204.6

VPS8-210, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 4,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-210ENST00000446204 RRP7BPQ9NSQ0 103 aa10.88□□□□□ -0.67
VPS8-210ENST00000446204 RUSC2Q8N2Y8 1516 aa10.88□□□□□ -0.67
VPS8-210ENST00000446204 FHAD1B1AJZ9 1412 aa10.86□□□□□ -0.67
VPS8-210ENST00000446204 CCDC136Q96JN2 1154 aa10.85□□□□□ -0.67
VPS8-210ENST00000446204 SETD5Q9C0A6 1442 aa10.85□□□□□ -0.67
VPS8-210ENST00000446204 SMARCA4P51532 1647 aa10.85□□□□□ -0.67
VPS8-210ENST00000446204 TMC1Q8TDI8 760 aa10.85□□□□□ -0.67
VPS8-210ENST00000446204 CARMIL1Q5VZK9 1371 aa10.85□□□□□ -0.67
VPS8-210ENST00000446204 RAPGEF2Q9Y4G8 1499 aa10.84□□□□□ -0.67
VPS8-210ENST00000446204 SMARCA2P51531 1590 aa10.83□□□□□ -0.68
VPS8-210ENST00000446204 CUX2O14529 1486 aa10.83□□□□□ -0.68
VPS8-210ENST00000446204 NPM2Q86SE8 214 aaKnown RBP10.83□□□□□ -0.68
VPS8-210ENST00000446204 CCER2I3L3R5 266 aa10.82□□□□□ -0.68
VPS8-210ENST00000446204 RAB3GAP2Q9H2M9 1393 aa10.82□□□□□ -0.68
VPS8-210ENST00000446204 DHX57Q6P158 1386 aaKnown RBP10.81□□□□□ -0.68
VPS8-210ENST00000446204 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
VPS8-210ENST00000446204 SALL2Q9Y467 1007 aaPredicted RBP10.78□□□□□ -0.68
VPS8-210ENST00000446204 CANXP27824 592 aaKnown RBP10.76□□□□□ -0.69
VPS8-210ENST00000446204 TSPY4P0CV99 314 aa10.76□□□□□ -0.69
VPS8-210ENST00000446204 TSPY10P0CW01 314 aa10.76□□□□□ -0.69
VPS8-210ENST00000446204 KDM2AQ9Y2K7 1162 aa10.76□□□□□ -0.69
VPS8-210ENST00000446204 ATAD2BQ9ULI0 1458 aa10.76□□□□□ -0.69
VPS8-210ENST00000446204 NBR1Q14596 966 aa10.75□□□□□ -0.69
VPS8-210ENST00000446204 PPP4R2Q9NY27 417 aa10.75□□□□□ -0.69
VPS8-210ENST00000446204 ARHGAP35Q9NRY4 1499 aa10.75□□□□□ -0.69
VPS8-210ENST00000446204 PPP1R15AO75807 674 aaPredicted RBP10.74□□□□□ -0.69
VPS8-210ENST00000446204 TSHZ2Q9NRE2 1034 aa10.73□□□□□ -0.69
VPS8-210ENST00000446204 RBM19Q9Y4C8 960 aaKnown RBP10.72□□□□□ -0.69
VPS8-210ENST00000446204 HSPA5P11021 654 aaKnown RBP10.69□□□□□ -0.7
VPS8-210ENST00000446204 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.7
VPS8-210ENST00000446204 CFDP1Q9UEE9 299 aaPredicted RBP10.69□□□□□ -0.7
VPS8-210ENST00000446204 CHMP7Q8WUX9 453 aaPredicted RBP10.68□□□□□ -0.7
VPS8-210ENST00000446204 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.67□□□□□ -0.7
VPS8-210ENST00000446204 KCNH8Q96L42 1107 aa10.67□□□□□ -0.7
VPS8-210ENST00000446204 FMN1Q68DA7 1419 aa10.67□□□□□ -0.7
VPS8-210ENST00000446204 KIF21BO75037 1637 aa10.67□□□□□ -0.7
VPS8-210ENST00000446204 WDR43Q15061 677 aaKnown RBP eCLIP10.66□□□□□ -0.7
VPS8-210ENST00000446204 B4GALNT3Q6L9W6 998 aa10.66□□□□□ -0.7
VPS8-210ENST00000446204 CARD11Q9BXL7 1154 aa10.66□□□□□ -0.7
VPS8-210ENST00000446204 PLEKHD1A6NEE1 506 aa10.65□□□□□ -0.7
VPS8-210ENST00000446204 ERICH6BQ5W0A0 696 aa10.65□□□□□ -0.7
VPS8-210ENST00000446204 SENP3-EIF4A1A0A087X0R7 540 aa10.64□□□□□ -0.71
VPS8-210ENST00000446204 FHOD3Q2V2M9 1422 aa10.63□□□□□ -0.71
VPS8-210ENST00000446204 CADPSQ9ULU8 1353 aa10.62□□□□□ -0.71
VPS8-210ENST00000446204 MPHOSPH9Q99550 1183 aa10.61□□□□□ -0.71
VPS8-210ENST00000446204 RGL3Q3MIN7 710 aa10.61□□□□□ -0.71
VPS8-210ENST00000446204 UPF2Q9HAU5 1272 aaKnown RBP10.61□□□□□ -0.71
VPS8-210ENST00000446204 NOP58Q9Y2X3 529 aaKnown RBP10.61□□□□□ -0.71
VPS8-210ENST00000446204 EIF4G1Q04637 1599 aaKnown RBP10.61□□□□□ -0.71
VPS8-210ENST00000446204 NEFMP07197 916 aa10.6□□□□□ -0.71
VPS8-210ENST00000446204 FOXD1Q16676 465 aa10.59□□□□□ -0.71
VPS8-210ENST00000446204 DDRGK1Q96HY6 314 aa10.59□□□□□ -0.71
VPS8-210ENST00000446204 SYNJ1O43426 1573 aa10.58□□□□□ -0.72
VPS8-210ENST00000446204 CHGAP10645 457 aaKnown RBP10.58□□□□□ -0.72
VPS8-210ENST00000446204 IGF1RP08069 1367 aa10.57□□□□□ -0.72
VPS8-210ENST00000446204 L3MBTL2Q969R5 705 aa10.57□□□□□ -0.72
VPS8-210ENST00000446204 TDRD9Q8NDG6 1382 aaKnown RBP10.57□□□□□ -0.72
VPS8-210ENST00000446204 RRBP1Q9P2E9 1410 aaKnown RBP10.56□□□□□ -0.72
VPS8-210ENST00000446204 ERICH3Q5RHP9 1530 aa10.56□□□□□ -0.72
VPS8-210ENST00000446204 ARAP1Q96P48 1450 aa10.55□□□□□ -0.72
VPS8-210ENST00000446204 BCL11AQ9H165 835 aa10.54□□□□□ -0.72
VPS8-210ENST00000446204 KNSTRNQ9Y448 316 aa10.54□□□□□ -0.72
VPS8-210ENST00000446204 DCAF11Q8TEB1 546 aa10.54□□□□□ -0.72
VPS8-210ENST00000446204 PPM1GO15355 546 aaPredicted RBP10.53□□□□□ -0.72
VPS8-210ENST00000446204 CDCA8Q53HL2 280 aa10.53□□□□□ -0.72
VPS8-210ENST00000446204 PKD2Q13563 968 aa10.53□□□□□ -0.72
VPS8-210ENST00000446204 PHLDB1Q86UU1 1377 aa10.53□□□□□ -0.72
VPS8-210ENST00000446204 CCDC18Q5T9S5 1454 aa10.52□□□□□ -0.73
VPS8-210ENST00000446204 EIF5BO60841 1220 aaKnown RBP10.52□□□□□ -0.73
VPS8-210ENST00000446204 PRXQ9BXM0 1461 aa10.52□□□□□ -0.73
VPS8-210ENST00000446204 LRRC9Q6ZRR7 1453 aa10.52□□□□□ -0.73
VPS8-210ENST00000446204 CC2D1BQ5T0F9 858 aaKnown RBP10.5□□□□□ -0.73
VPS8-210ENST00000446204 NUDCQ9Y266 331 aa10.49□□□□□ -0.73
VPS8-210ENST00000446204 PDS5BQ9NTI5 1447 aa10.49□□□□□ -0.73
VPS8-210ENST00000446204 DEKP35659 375 aaKnown RBP10.49□□□□□ -0.73
VPS8-210ENST00000446204 LAS1LQ9Y4W2 734 aaKnown RBP10.49□□□□□ -0.73
VPS8-210ENST00000446204 HSP90AA1P07900 732 aaKnown RBP10.49□□□□□ -0.73
VPS8-210ENST00000446204 PRKRIP1Q9H875 184 aaPredicted RBP10.49□□□□□ -0.73
VPS8-210ENST00000446204 FGD5Q6ZNL6 1462 aa10.48□□□□□ -0.73
VPS8-210ENST00000446204 NCAPD3P42695 1498 aa10.48□□□□□ -0.73
VPS8-210ENST00000446204 TMF1P82094 1093 aa10.48□□□□□ -0.73
VPS8-210ENST00000446204 BECN1Q14457 450 aa10.48□□□□□ -0.73
VPS8-210ENST00000446204 RALBP1Q15311 655 aa10.48□□□□□ -0.73
VPS8-210ENST00000446204 FGD6Q6ZV73 1430 aa10.47□□□□□ -0.73
VPS8-210ENST00000446204 TOP2BQ02880 1626 aa10.47□□□□□ -0.73
VPS8-210ENST00000446204 FANCD2Q9BXW9 1451 aa10.47□□□□□ -0.73
VPS8-210ENST00000446204 UACAQ9BZF9 1416 aa10.46□□□□□ -0.73
VPS8-210ENST00000446204 RCAN3Q9UKA8 241 aa10.46□□□□□ -0.74
VPS8-210ENST00000446204 KTN1Q86UP2 1357 aaKnown RBP10.46□□□□□ -0.74
VPS8-210ENST00000446204 ANKRD30AQ9BXX3 1397 aa10.46□□□□□ -0.74
VPS8-210ENST00000446204 ZBED9Q6R2W3 1325 aa10.45□□□□□ -0.74
VPS8-210ENST00000446204 NUP155O75694 1391 aa10.45□□□□□ -0.74
VPS8-210ENST00000446204 ANP32BQ92688 251 aaKnown RBP10.44□□□□□ -0.74
VPS8-210ENST00000446204 TCERG1O14776 1098 aaKnown RBP10.44□□□□□ -0.74
VPS8-210ENST00000446204 RGS3P49796 1198 aa10.44□□□□□ -0.74
VPS8-210ENST00000446204 FANCIQ9NVI1 1328 aa10.44□□□□□ -0.74
VPS8-210ENST00000446204 NPM1P06748 294 aaKnown RBP eCLIP10.43□□□□□ -0.74
VPS8-210ENST00000446204 ROCK2O75116 1388 aaKnown RBP10.43□□□□□ -0.74
VPS8-210ENST00000446204 MYOM3Q5VTT5 1437 aa10.43□□□□□ -0.74
VPS8-210ENST00000446204 CASKIN1Q8WXD9 1431 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms