RNA–Protein interactions for RNA: ENST00000445924.5

ARPC1B-210, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 5

Gene ARPC1B, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-210ENST00000445924 CEP162Q5TB80 1403 aa22.37■■□□□ 1.17
ARPC1B-210ENST00000445924 IQGAP2Q13576 1575 aa22.32■■□□□ 1.16
ARPC1B-210ENST00000445924 CEP170Q5SW79 1584 aa22.31■■□□□ 1.16
ARPC1B-210ENST00000445924 CLIP1P30622 1438 aa22.31■■□□□ 1.16
ARPC1B-210ENST00000445924 KIAA0586Q9BVV6 1533 aa22.3■■□□□ 1.16
ARPC1B-210ENST00000445924 NUP160Q12769 1436 aa22.3■■□□□ 1.16
ARPC1B-210ENST00000445924 RANGAP1P46060 587 aaPredicted RBP22.29■■□□□ 1.16
ARPC1B-210ENST00000445924 EFCAB5A4FU69 1503 aa22.24■■□□□ 1.15
ARPC1B-210ENST00000445924 UGGT2Q9NYU1 1516 aa22.18■■□□□ 1.14
ARPC1B-210ENST00000445924 ARHGAP35Q9NRY4 1499 aa22.16■■□□□ 1.14
ARPC1B-210ENST00000445924 SAMD9Q5K651 1589 aa22.16■■□□□ 1.14
ARPC1B-210ENST00000445924 CLASP1Q7Z460 1538 aa22.12■■□□□ 1.13
ARPC1B-210ENST00000445924 OSCARQ8IYS5 282 aa22.12■■□□□ 1.13
ARPC1B-210ENST00000445924 JPH4Q96JJ6 628 aa22.12■■□□□ 1.13
ARPC1B-210ENST00000445924 CARMIL2Q6F5E8 1435 aa22.11■■□□□ 1.13
ARPC1B-210ENST00000445924 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
ARPC1B-210ENST00000445924 P3H3Q8IVL6 736 aa22.08■■□□□ 1.13
ARPC1B-210ENST00000445924 KIAA0556O60303 1618 aa22.08■■□□□ 1.13
ARPC1B-210ENST00000445924 SHROOM2Q13796 1616 aa22.08■■□□□ 1.13
ARPC1B-210ENST00000445924 VPS8Q8N3P4 1428 aa22.06■■□□□ 1.12
ARPC1B-210ENST00000445924 FHOD3Q2V2M9 1422 aa22.05■■□□□ 1.12
ARPC1B-210ENST00000445924 DISP1Q96F81 1524 aa22.03■■□□□ 1.12
ARPC1B-210ENST00000445924 FMN1Q68DA7 1419 aa22.03■■□□□ 1.12
ARPC1B-210ENST00000445924 PRG4Q92954 1404 aaPredicted RBP22.02■■□□□ 1.12
ARPC1B-210ENST00000445924 APLP2Q06481 763 aa21.95■■□□□ 1.1
ARPC1B-210ENST00000445924 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
ARPC1B-210ENST00000445924 PCF11O94913 1555 aaKnown RBP21.9■■□□□ 1.1
ARPC1B-210ENST00000445924 TTBK1Q5TCY1 1321 aaPredicted RBP21.89■■□□□ 1.1
ARPC1B-210ENST00000445924 CASKIN1Q8WXD9 1431 aa21.89■■□□□ 1.09
ARPC1B-210ENST00000445924 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
ARPC1B-210ENST00000445924 HECW1Q76N89 1606 aa21.86■■□□□ 1.09
ARPC1B-210ENST00000445924 PTPRGP23470 1445 aa21.86■■□□□ 1.09
ARPC1B-210ENST00000445924 ERCC6L2Q5T890 1561 aa21.85■■□□□ 1.09
ARPC1B-210ENST00000445924 RAPGEF6Q8TEU7 1601 aa21.84■■□□□ 1.09
ARPC1B-210ENST00000445924 CCDC18Q5T9S5 1454 aa21.78■■□□□ 1.08
ARPC1B-210ENST00000445924 MAP3K1Q13233 1512 aa21.78■■□□□ 1.08
ARPC1B-210ENST00000445924 CFAP43Q8NDM7 1665 aa21.77■■□□□ 1.08
ARPC1B-210ENST00000445924 ABCA8O94911 1581 aa21.76■■□□□ 1.07
ARPC1B-210ENST00000445924 TIAM1Q13009 1591 aa21.75■■□□□ 1.07
ARPC1B-210ENST00000445924 PLB1Q6P1J6 1458 aa21.75■■□□□ 1.07
ARPC1B-210ENST00000445924 UACAQ9BZF9 1416 aa21.73■■□□□ 1.07
ARPC1B-210ENST00000445924 LRRIQ1Q96JM4 1722 aa21.72■■□□□ 1.07
ARPC1B-210ENST00000445924 ARHGEF11O15085 1522 aa21.72■■□□□ 1.07
ARPC1B-210ENST00000445924 EPRSP07814 1512 aaKnown RBP21.7■■□□□ 1.07
ARPC1B-210ENST00000445924 NUP153P49790 1475 aaKnown RBP21.69■■□□□ 1.06
ARPC1B-210ENST00000445924 ABCC2Q92887 1545 aa21.69■■□□□ 1.06
ARPC1B-210ENST00000445924 RIMBP3CA6NJZ7 1639 aa21.68■■□□□ 1.06
ARPC1B-210ENST00000445924 RIMBP3BA6NNM3 1639 aa21.68■■□□□ 1.06
ARPC1B-210ENST00000445924 RIMBP3Q9UFD9 1639 aa21.68■■□□□ 1.06
ARPC1B-210ENST00000445924 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.67■■□□□ 1.06
ARPC1B-210ENST00000445924 HNRNPUL2Q1KMD3 747 aaKnown RBP21.67■■□□□ 1.06
ARPC1B-210ENST00000445924 UHRF1BP1LA0JNW5 1464 aa21.66■■□□□ 1.06
ARPC1B-210ENST00000445924 PPARGC1BQ86YN6 1023 aaKnown RBP21.65■■□□□ 1.06
ARPC1B-210ENST00000445924 CDK11AQ9UQ88 783 aaPredicted RBP21.65■■□□□ 1.06
ARPC1B-210ENST00000445924 CDK13Q14004 1512 aaKnown RBP21.63■■□□□ 1.05
ARPC1B-210ENST00000445924 LRRC9Q6ZRR7 1453 aa21.63■■□□□ 1.05
ARPC1B-210ENST00000445924 MTUS2Q5JR59 1369 aa21.62■■□□□ 1.05
ARPC1B-210ENST00000445924 ARID3CA6NKF2 412 aa21.62■■□□□ 1.05
ARPC1B-210ENST00000445924 EHBP1L1Q8N3D4 1523 aa21.6■■□□□ 1.05
ARPC1B-210ENST00000445924 ADCY10Q96PN6 1610 aa21.58■■□□□ 1.05
ARPC1B-210ENST00000445924 KANK4Q5T7N3 995 aaPredicted RBP21.58■■□□□ 1.05
ARPC1B-210ENST00000445924 ATP10BO94823 1461 aa21.58■■□□□ 1.04
ARPC1B-210ENST00000445924 SUPT6HQ7KZ85 1726 aaKnown RBP21.56■■□□□ 1.04
ARPC1B-210ENST00000445924 ZCCHC11Q5TAX3 1644 aaKnown RBP21.55■■□□□ 1.04
ARPC1B-210ENST00000445924 PLEKHD1A6NEE1 506 aa21.54■■□□□ 1.04
ARPC1B-210ENST00000445924 NPM1P06748 294 aaKnown RBP eCLIP21.54■■□□□ 1.04
ARPC1B-210ENST00000445924 KDM5BQ9UGL1 1544 aa21.54■■□□□ 1.04
ARPC1B-210ENST00000445924 TROQ12816 1431 aaPredicted RBP21.5■■□□□ 1.03
ARPC1B-210ENST00000445924 CYB5RLQ6IPT4 315 aa21.5■■□□□ 1.03
ARPC1B-210ENST00000445924 MAGI3Q5TCQ9 1506 aa21.49■■□□□ 1.03
ARPC1B-210ENST00000445924 TRIM26Q12899 539 aaPredicted RBP21.47■■□□□ 1.03
ARPC1B-210ENST00000445924 KIF14Q15058 1648 aa21.46■■□□□ 1.03
ARPC1B-210ENST00000445924 NCOA2Q15596 1464 aa21.44■■□□□ 1.02
ARPC1B-210ENST00000445924 ITSN2Q9NZM3 1697 aa21.37■■□□□ 1.01
ARPC1B-210ENST00000445924 WDR7Q9Y4E6 1490 aa21.37■■□□□ 1.01
ARPC1B-210ENST00000445924 CCNB3Q8WWL7 1395 aa21.36■■□□□ 1.01
ARPC1B-210ENST00000445924 ASXL2Q76L83 1435 aa21.35■■□□□ 1.01
ARPC1B-210ENST00000445924 PHLDB1Q86UU1 1377 aa21.35■■□□□ 1.01
ARPC1B-210ENST00000445924 MYOM3Q5VTT5 1437 aa21.34■■□□□ 1.01
ARPC1B-210ENST00000445924 KCNH8Q96L42 1107 aa21.33■■□□□ 1.01
ARPC1B-210ENST00000445924 DNAJC5Q9H3Z4 198 aa21.32■■□□□ 1
ARPC1B-210ENST00000445924 MAPKBP1O60336 1514 aa21.32■■□□□ 1
ARPC1B-210ENST00000445924 RRBP1Q9P2E9 1410 aaKnown RBP21.31■■□□□ 1
ARPC1B-210ENST00000445924 MYO5CQ9NQX4 1742 aa21.29■■□□□ 1
ARPC1B-210ENST00000445924 FGD6Q6ZV73 1430 aa21.29■■□□□ 1
ARPC1B-210ENST00000445924 MIA2Q96PC5 1412 aa21.29■■□□□ 1
ARPC1B-210ENST00000445924 ABCC10Q5T3U5 1492 aa21.28■■□□□ 1
ARPC1B-210ENST00000445924 PCGF6Q9BYE7 350 aa21.28■■□□□ 1
ARPC1B-210ENST00000445924 CDC42BPAQ5VT25 1732 aa21.28■■□□□ 1
ARPC1B-210ENST00000445924 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.28■■□□□ 1
ARPC1B-210ENST00000445924 PTPN23Q9H3S7 1636 aa21.26■□□□□ 0.99
ARPC1B-210ENST00000445924 TTC37Q6PGP7 1564 aa21.25■□□□□ 0.99
ARPC1B-210ENST00000445924 PREX2Q70Z35 1606 aa21.24■□□□□ 0.99
ARPC1B-210ENST00000445924 GPATCH8Q9UKJ3 1502 aaKnown RBP21.24■□□□□ 0.99
ARPC1B-210ENST00000445924 ABCA9Q8IUA7 1624 aa21.23■□□□□ 0.99
ARPC1B-210ENST00000445924 FAM50AQ14320 339 aaKnown RBP21.23■□□□□ 0.99
ARPC1B-210ENST00000445924 CFDP1Q9UEE9 299 aaPredicted RBP21.23■□□□□ 0.99
ARPC1B-210ENST00000445924 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.23■□□□□ 0.99
ARPC1B-210ENST00000445924 CDC42BPBQ9Y5S2 1711 aa21.2■□□□□ 0.98
ARPC1B-210ENST00000445924 TCOF1Q13428 1488 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms