RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 JPH4Q96JJ6 628 aa28.1■■■□□ 2.09
SGCE-206ENST00000445866 TNIKQ9UKE5 1360 aa28.09■■■□□ 2.09
SGCE-206ENST00000445866 KIAA0586Q9BVV6 1533 aa28.08■■■□□ 2.09
SGCE-206ENST00000445866 CHD1O14646 1710 aa28.05■■■□□ 2.08
SGCE-206ENST00000445866 CEP170Q5SW79 1584 aa28.04■■■□□ 2.08
SGCE-206ENST00000445866 P3H3Q8IVL6 736 aa27.92■■■□□ 2.06
SGCE-206ENST00000445866 IQGAP2Q13576 1575 aa27.89■■■□□ 2.06
SGCE-206ENST00000445866 CLASP1Q7Z460 1538 aa27.89■■■□□ 2.05
SGCE-206ENST00000445866 PRG4Q92954 1404 aaPredicted RBP27.88■■■□□ 2.05
SGCE-206ENST00000445866 CLIP1P30622 1438 aa27.82■■■□□ 2.04
SGCE-206ENST00000445866 CEP162Q5TB80 1403 aa27.82■■■□□ 2.04
SGCE-206ENST00000445866 CARMIL2Q6F5E8 1435 aa27.81■■■□□ 2.04
SGCE-206ENST00000445866 TTBK1Q5TCY1 1321 aaPredicted RBP27.81■■■□□ 2.04
SGCE-206ENST00000445866 UGGT2Q9NYU1 1516 aa27.79■■■□□ 2.04
SGCE-206ENST00000445866 CTTNBP2Q8WZ74 1663 aa27.75■■■□□ 2.03
SGCE-206ENST00000445866 DNAJC5Q9H3Z4 198 aa27.75■■■□□ 2.03
SGCE-206ENST00000445866 DISP1Q96F81 1524 aa27.73■■■□□ 2.03
SGCE-206ENST00000445866 ARHGAP35Q9NRY4 1499 aa27.71■■■□□ 2.03
SGCE-206ENST00000445866 SHROOM2Q13796 1616 aa27.68■■■□□ 2.02
SGCE-206ENST00000445866 PTPRGP23470 1445 aa27.67■■■□□ 2.02
SGCE-206ENST00000445866 FHOD3Q2V2M9 1422 aa27.67■■■□□ 2.02
SGCE-206ENST00000445866 ERCC6L2Q5T890 1561 aa27.64■■■□□ 2.02
SGCE-206ENST00000445866 EFCAB5A4FU69 1503 aa27.63■■■□□ 2.01
SGCE-206ENST00000445866 CYB5RLQ6IPT4 315 aa27.61■■■□□ 2.01
SGCE-206ENST00000445866 ARHGEF11O15085 1522 aa27.6■■■□□ 2.01
SGCE-206ENST00000445866 ARAP1Q96P48 1450 aa27.59■■■□□ 2.01
SGCE-206ENST00000445866 KIAA0556O60303 1618 aa27.58■■■□□ 2.01
SGCE-206ENST00000445866 SAMD9Q5K651 1589 aa27.58■■■□□ 2
SGCE-206ENST00000445866 ATP1B4Q9UN42 357 aaPredicted RBP27.57■■■□□ 2
SGCE-206ENST00000445866 FMN1Q68DA7 1419 aa27.52■■■□□ 2
SGCE-206ENST00000445866 RIMBP3CA6NJZ7 1639 aa27.44■■□□□ 1.98
SGCE-206ENST00000445866 RIMBP3BA6NNM3 1639 aa27.44■■□□□ 1.98
SGCE-206ENST00000445866 RIMBP3Q9UFD9 1639 aa27.44■■□□□ 1.98
SGCE-206ENST00000445866 ARID3CA6NKF2 412 aa27.43■■□□□ 1.98
SGCE-206ENST00000445866 UACAQ9BZF9 1416 aa27.43■■□□□ 1.98
SGCE-206ENST00000445866 PLB1Q6P1J6 1458 aa27.42■■□□□ 1.98
SGCE-206ENST00000445866 VPS8Q8N3P4 1428 aa27.42■■□□□ 1.98
SGCE-206ENST00000445866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.36■■□□□ 1.97
SGCE-206ENST00000445866 NPM1P06748 294 aaKnown RBP eCLIP27.36■■□□□ 1.97
SGCE-206ENST00000445866 HNRNPUL2Q1KMD3 747 aaKnown RBP27.36■■□□□ 1.97
SGCE-206ENST00000445866 CASKIN1Q8WXD9 1431 aa27.36■■□□□ 1.97
SGCE-206ENST00000445866 APLP2Q06481 763 aa27.34■■□□□ 1.97
SGCE-206ENST00000445866 UHRF1BP1LA0JNW5 1464 aa27.28■■□□□ 1.96
SGCE-206ENST00000445866 ABCA8O94911 1581 aa27.28■■□□□ 1.96
SGCE-206ENST00000445866 NUP153P49790 1475 aaKnown RBP27.25■■□□□ 1.95
SGCE-206ENST00000445866 FYCO1Q9BQS8 1478 aa27.25■■□□□ 1.95
SGCE-206ENST00000445866 ABCC2Q92887 1545 aa27.24■■□□□ 1.95
SGCE-206ENST00000445866 CDK11AQ9UQ88 783 aaPredicted RBP27.22■■□□□ 1.95
SGCE-206ENST00000445866 RAPGEF6Q8TEU7 1601 aa27.22■■□□□ 1.95
SGCE-206ENST00000445866 ATP10BO94823 1461 aa27.21■■□□□ 1.95
SGCE-206ENST00000445866 PLEKHD1A6NEE1 506 aa27.21■■□□□ 1.95
SGCE-206ENST00000445866 PCF11O94913 1555 aaKnown RBP27.19■■□□□ 1.94
SGCE-206ENST00000445866 EPRSP07814 1512 aaKnown RBP27.17■■□□□ 1.94
SGCE-206ENST00000445866 KDM5BQ9UGL1 1544 aa27.15■■□□□ 1.94
SGCE-206ENST00000445866 ADCY10Q96PN6 1610 aa27.14■■□□□ 1.94
SGCE-206ENST00000445866 HECW1Q76N89 1606 aa27.13■■□□□ 1.93
SGCE-206ENST00000445866 PPARGC1BQ86YN6 1023 aaKnown RBP27.13■■□□□ 1.93
SGCE-206ENST00000445866 KANK4Q5T7N3 995 aaPredicted RBP27.12■■□□□ 1.93
SGCE-206ENST00000445866 CDK13Q14004 1512 aaKnown RBP27.11■■□□□ 1.93
SGCE-206ENST00000445866 CCDC18Q5T9S5 1454 aa27.11■■□□□ 1.93
SGCE-206ENST00000445866 KCNH8Q96L42 1107 aa27.11■■□□□ 1.93
SGCE-206ENST00000445866 MTUS2Q5JR59 1369 aa27.06■■□□□ 1.92
SGCE-206ENST00000445866 ASXL2Q76L83 1435 aa27.02■■□□□ 1.92
SGCE-206ENST00000445866 MAP3K1Q13233 1512 aa27.01■■□□□ 1.91
SGCE-206ENST00000445866 TROQ12816 1431 aaPredicted RBP26.96■■□□□ 1.91
SGCE-206ENST00000445866 ZCCHC11Q5TAX3 1644 aaKnown RBP26.96■■□□□ 1.91
SGCE-206ENST00000445866 TIAM1Q13009 1591 aa26.96■■□□□ 1.91
SGCE-206ENST00000445866 LRRC9Q6ZRR7 1453 aa26.96■■□□□ 1.91
SGCE-206ENST00000445866 WDR7Q9Y4E6 1490 aa26.93■■□□□ 1.9
SGCE-206ENST00000445866 FAM69CQ0P6D2 419 aa26.91■■□□□ 1.9
SGCE-206ENST00000445866 MAGI3Q5TCQ9 1506 aa26.89■■□□□ 1.9
SGCE-206ENST00000445866 MAPKBP1O60336 1514 aa26.88■■□□□ 1.89
SGCE-206ENST00000445866 LRRIQ1Q96JM4 1722 aa26.87■■□□□ 1.89
SGCE-206ENST00000445866 TRHP20396 242 aaPredicted RBP26.86■■□□□ 1.89
SGCE-206ENST00000445866 EHBP1L1Q8N3D4 1523 aa26.81■■□□□ 1.88
SGCE-206ENST00000445866 CFAP43Q8NDM7 1665 aa26.8■■□□□ 1.88
SGCE-206ENST00000445866 ABCC10Q5T3U5 1492 aa26.79■■□□□ 1.88
SGCE-206ENST00000445866 CCNB3Q8WWL7 1395 aa26.79■■□□□ 1.88
SGCE-206ENST00000445866 NCOA2Q15596 1464 aa26.78■■□□□ 1.88
SGCE-206ENST00000445866 CFDP1Q9UEE9 299 aaPredicted RBP26.74■■□□□ 1.87
SGCE-206ENST00000445866 PHLDB1Q86UU1 1377 aa26.73■■□□□ 1.87
SGCE-206ENST00000445866 CD109Q6YHK3 1445 aa26.73■■□□□ 1.87
SGCE-206ENST00000445866 KIF14Q15058 1648 aa26.7■■□□□ 1.86
SGCE-206ENST00000445866 EFCAB2Q5VUJ9 269 aa26.7■■□□□ 1.86
SGCE-206ENST00000445866 ZNF777Q9ULD5 760 aaPredicted RBP26.7■■□□□ 1.86
SGCE-206ENST00000445866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.69■■□□□ 1.86
SGCE-206ENST00000445866 GPATCH8Q9UKJ3 1502 aaKnown RBP26.67■■□□□ 1.86
SGCE-206ENST00000445866 PLCH2O75038 1416 aa26.66■■□□□ 1.86
SGCE-206ENST00000445866 SUPT6HQ7KZ85 1726 aaKnown RBP26.63■■□□□ 1.85
SGCE-206ENST00000445866 MYOM3Q5VTT5 1437 aa26.63■■□□□ 1.85
SGCE-206ENST00000445866 GLI2P10070 1586 aa26.62■■□□□ 1.85
SGCE-206ENST00000445866 ZNF644Q9H582 1327 aaPredicted RBP26.61■■□□□ 1.85
SGCE-206ENST00000445866 DIP2BQ9P265 1576 aa26.61■■□□□ 1.85
SGCE-206ENST00000445866 FAM50AQ14320 339 aaKnown RBP26.6■■□□□ 1.85
SGCE-206ENST00000445866 TTC37Q6PGP7 1564 aa26.58■■□□□ 1.85
SGCE-206ENST00000445866 ABCA9Q8IUA7 1624 aa26.57■■□□□ 1.84
SGCE-206ENST00000445866 FGD6Q6ZV73 1430 aa26.55■■□□□ 1.84
SGCE-206ENST00000445866 MIA2Q96PC5 1412 aa26.55■■□□□ 1.84
SGCE-206ENST00000445866 ARHGAP5Q13017 1502 aa26.53■■□□□ 1.84
SGCE-206ENST00000445866 HNRNPMP52272 730 aaKnown RBP eCLIP26.53■■□□□ 1.845e-8■■■■■ 27.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms