RNA–Protein interactions for RNA: ENST00000445853.5

FLOT1-206, Transcript of flotillin 1, humanhuman

TSL 1 (best)

Gene FLOT1, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-206ENST00000445853 RIMBP3Q9UFD9 1639 aa19.91■□□□□ 0.78
FLOT1-206ENST00000445853 RUSC2Q8N2Y8 1516 aa19.87■□□□□ 0.77
FLOT1-206ENST00000445853 CYB5RLQ6IPT4 315 aa19.87■□□□□ 0.77
FLOT1-206ENST00000445853 PRXQ9BXM0 1461 aa19.86■□□□□ 0.77
FLOT1-206ENST00000445853 SHROOM2Q13796 1616 aa19.83■□□□□ 0.76
FLOT1-206ENST00000445853 PRG4Q92954 1404 aaPredicted RBP19.81■□□□□ 0.76
FLOT1-206ENST00000445853 ARAP1Q96P48 1450 aa19.8■□□□□ 0.76
FLOT1-206ENST00000445853 CARMIL2Q6F5E8 1435 aa19.78■□□□□ 0.76
FLOT1-206ENST00000445853 IQGAP2Q13576 1575 aa19.73■□□□□ 0.75
FLOT1-206ENST00000445853 FAM9AQ8IZU1 332 aaPredicted RBP19.72■□□□□ 0.75
FLOT1-206ENST00000445853 TNIKQ9UKE5 1360 aa19.68■□□□□ 0.74
FLOT1-206ENST00000445853 GOLGA3Q08378 1498 aa19.67■□□□□ 0.74
FLOT1-206ENST00000445853 UGGT2Q9NYU1 1516 aa19.67■□□□□ 0.74
FLOT1-206ENST00000445853 PTPRGP23470 1445 aa19.65■□□□□ 0.74
FLOT1-206ENST00000445853 ERCC6L2Q5T890 1561 aa19.62■□□□□ 0.73
FLOT1-206ENST00000445853 NPM1P06748 294 aaKnown RBP eCLIP19.62■□□□□ 0.73
FLOT1-206ENST00000445853 KIF21BO75037 1637 aa19.62■□□□□ 0.73
FLOT1-206ENST00000445853 DISP1Q96F81 1524 aa19.57■□□□□ 0.72
FLOT1-206ENST00000445853 CTTNBP2Q8WZ74 1663 aa19.55■□□□□ 0.72
FLOT1-206ENST00000445853 UBTFP17480 764 aaKnown RBP19.54■□□□□ 0.72
FLOT1-206ENST00000445853 UACAQ9BZF9 1416 aa19.51■□□□□ 0.71
FLOT1-206ENST00000445853 UHRF1BP1LA0JNW5 1464 aa19.5■□□□□ 0.71
FLOT1-206ENST00000445853 KIAA0556O60303 1618 aa19.5■□□□□ 0.71
FLOT1-206ENST00000445853 TRHP20396 242 aaPredicted RBP19.46■□□□□ 0.71
FLOT1-206ENST00000445853 EFCAB5A4FU69 1503 aa19.43■□□□□ 0.7
FLOT1-206ENST00000445853 ABCC2Q92887 1545 aa19.43■□□□□ 0.7
FLOT1-206ENST00000445853 MAPKBP1O60336 1514 aa19.41■□□□□ 0.7
FLOT1-206ENST00000445853 TTBK1Q5TCY1 1321 aaPredicted RBP19.4■□□□□ 0.7
FLOT1-206ENST00000445853 SAMD9Q5K651 1589 aa19.39■□□□□ 0.69
FLOT1-206ENST00000445853 ADCY10Q96PN6 1610 aa19.39■□□□□ 0.69
FLOT1-206ENST00000445853 KDM5BQ9UGL1 1544 aa19.36■□□□□ 0.69
FLOT1-206ENST00000445853 PLB1Q6P1J6 1458 aa19.36■□□□□ 0.69
FLOT1-206ENST00000445853 P3H3Q8IVL6 736 aa19.34■□□□□ 0.69
FLOT1-206ENST00000445853 ABCC10Q5T3U5 1492 aa19.32■□□□□ 0.68
FLOT1-206ENST00000445853 FMN1Q68DA7 1419 aa19.32■□□□□ 0.68
FLOT1-206ENST00000445853 ABCA8O94911 1581 aa19.32■□□□□ 0.68
FLOT1-206ENST00000445853 RANGAP1P46060 587 aaPredicted RBP19.3■□□□□ 0.68
FLOT1-206ENST00000445853 FAM69CQ0P6D2 419 aa19.28■□□□□ 0.68
FLOT1-206ENST00000445853 ASXL2Q76L83 1435 aa19.27■□□□□ 0.68
FLOT1-206ENST00000445853 EHMT2Q96KQ7 1210 aa19.27■□□□□ 0.68
FLOT1-206ENST00000445853 FHOD3Q2V2M9 1422 aa19.26■□□□□ 0.67
FLOT1-206ENST00000445853 ARHGAP35Q9NRY4 1499 aa19.23■□□□□ 0.67
FLOT1-206ENST00000445853 ATP10BO94823 1461 aa19.2■□□□□ 0.66
FLOT1-206ENST00000445853 WDR7Q9Y4E6 1490 aa19.2■□□□□ 0.66
FLOT1-206ENST00000445853 CLIP1P30622 1438 aa19.19■□□□□ 0.66
FLOT1-206ENST00000445853 RAPGEF6Q8TEU7 1601 aa19.19■□□□□ 0.66
FLOT1-206ENST00000445853 CDK11AQ9UQ88 783 aaPredicted RBP19.19■□□□□ 0.66
FLOT1-206ENST00000445853 GLI2P10070 1586 aa19.19■□□□□ 0.66
FLOT1-206ENST00000445853 PLEKHD1A6NEE1 506 aa19.18■□□□□ 0.66
FLOT1-206ENST00000445853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.17■□□□□ 0.66
FLOT1-206ENST00000445853 HNRNPUL2Q1KMD3 747 aaKnown RBP19.17■□□□□ 0.66
FLOT1-206ENST00000445853 ZCCHC11Q5TAX3 1644 aaKnown RBP19.17■□□□□ 0.66
FLOT1-206ENST00000445853 DIP2BQ9P265 1576 aa19.16■□□□□ 0.66
FLOT1-206ENST00000445853 NUP153P49790 1475 aaKnown RBP19.16■□□□□ 0.66
FLOT1-206ENST00000445853 EPRSP07814 1512 aaKnown RBP19.15■□□□□ 0.66
FLOT1-206ENST00000445853 CASKIN1Q8WXD9 1431 aa19.1■□□□□ 0.65
FLOT1-206ENST00000445853 TEX14Q8IWB6 1497 aa19.09■□□□□ 0.65
FLOT1-206ENST00000445853 CEP162Q5TB80 1403 aa19.08■□□□□ 0.65
FLOT1-206ENST00000445853 KCNH8Q96L42 1107 aa19.08■□□□□ 0.64
FLOT1-206ENST00000445853 HECW1Q76N89 1606 aa19.07■□□□□ 0.64
FLOT1-206ENST00000445853 ATP1B4Q9UN42 357 aaPredicted RBP19.07■□□□□ 0.64
FLOT1-206ENST00000445853 PHLDB1Q86UU1 1377 aa19.06■□□□□ 0.64
FLOT1-206ENST00000445853 CCDC18Q5T9S5 1454 aa19.06■□□□□ 0.64
FLOT1-206ENST00000445853 KIF13AQ9H1H9 1805 aa19.06■□□□□ 0.64
FLOT1-206ENST00000445853 FYCO1Q9BQS8 1478 aa19.05■□□□□ 0.64
FLOT1-206ENST00000445853 LOC105371045A0A1W2PR82 267 aa19.05■□□□□ 0.64
FLOT1-206ENST00000445853 ARID3CA6NKF2 412 aa19.05■□□□□ 0.64
FLOT1-206ENST00000445853 CD109Q6YHK3 1445 aa19.05■□□□□ 0.64
FLOT1-206ENST00000445853 MAGI3Q5TCQ9 1506 aa19.04■□□□□ 0.64
FLOT1-206ENST00000445853 MAP3K4Q9Y6R4 1608 aa18.99■□□□□ 0.63
FLOT1-206ENST00000445853 CFAP43Q8NDM7 1665 aa18.97■□□□□ 0.63
FLOT1-206ENST00000445853 TROQ12816 1431 aaPredicted RBP18.96■□□□□ 0.63
FLOT1-206ENST00000445853 ABCA9Q8IUA7 1624 aa18.95■□□□□ 0.62
FLOT1-206ENST00000445853 CDK13Q14004 1512 aaKnown RBP18.93■□□□□ 0.62
FLOT1-206ENST00000445853 NEO1Q92859 1461 aa18.91■□□□□ 0.62
FLOT1-206ENST00000445853 VPS8Q8N3P4 1428 aa18.91■□□□□ 0.62
FLOT1-206ENST00000445853 PCF11O94913 1555 aaKnown RBP18.9■□□□□ 0.62
FLOT1-206ENST00000445853 KDM6BO15054 1643 aa18.87■□□□□ 0.61
FLOT1-206ENST00000445853 PLCH2O75038 1416 aa18.87■□□□□ 0.61
FLOT1-206ENST00000445853 EFCAB2Q5VUJ9 269 aa18.87■□□□□ 0.61
FLOT1-206ENST00000445853 ARAP3Q8WWN8 1544 aa18.86■□□□□ 0.61
FLOT1-206ENST00000445853 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.85■□□□□ 0.61
FLOT1-206ENST00000445853 MTUS2Q5JR59 1369 aa18.85■□□□□ 0.61
FLOT1-206ENST00000445853 PPRC1Q5VV67 1664 aaKnown RBP18.84■□□□□ 0.61
FLOT1-206ENST00000445853 KIF14Q15058 1648 aa18.84■□□□□ 0.61
FLOT1-206ENST00000445853 APLP2Q06481 763 aa18.83■□□□□ 0.6
FLOT1-206ENST00000445853 TSPOAP1O95153 1857 aa18.83■□□□□ 0.6
FLOT1-206ENST00000445853 MAP3K1Q13233 1512 aa18.82■□□□□ 0.6
FLOT1-206ENST00000445853 FANCAO15360 1455 aa18.82■□□□□ 0.6
FLOT1-206ENST00000445853 CFAP74Q9C0B2 1584 aa18.81■□□□□ 0.6
FLOT1-206ENST00000445853 AKNAQ7Z591 1439 aa18.79■□□□□ 0.6
FLOT1-206ENST00000445853 COL17A1Q9UMD9 1497 aaPredicted RBP18.76■□□□□ 0.59
FLOT1-206ENST00000445853 DENND4BO75064 1496 aaPredicted RBP18.75■□□□□ 0.59
FLOT1-206ENST00000445853 EHBP1L1Q8N3D4 1523 aa18.74■□□□□ 0.59
FLOT1-206ENST00000445853 TTC37Q6PGP7 1564 aa18.74■□□□□ 0.59
FLOT1-206ENST00000445853 CCNB3Q8WWL7 1395 aa18.73■□□□□ 0.59
FLOT1-206ENST00000445853 LRRIQ1Q96JM4 1722 aa18.71■□□□□ 0.59
FLOT1-206ENST00000445853 CFDP1Q9UEE9 299 aaPredicted RBP18.71■□□□□ 0.59
FLOT1-206ENST00000445853 ADGRL1O94910 1474 aa18.71■□□□□ 0.59
FLOT1-206ENST00000445853 MAGI2Q86UL8 1455 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms