RNA–Protein interactions for RNA: ENST00000445817.1

LINC01641-202, Transcript of long intergenic non-protein coding RNA 1641, humanhuman

TSL 1 (best) BASIC

Gene LINC01641, Length 1,971 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01641-202ENST00000445817 IFT140Q96RY7 1462 aa14.59□□□□□ -0.07
LINC01641-202ENST00000445817 TTBK1Q5TCY1 1321 aaPredicted RBP14.53□□□□□ -0.08
LINC01641-202ENST00000445817 AQRO60306 1485 aaKnown RBP eCLIP14.52□□□□□ -0.09
LINC01641-202ENST00000445817 ARAP1Q96P48 1450 aa14.52□□□□□ -0.09
LINC01641-202ENST00000445817 GRIN2BQ13224 1484 aa14.51□□□□□ -0.09
LINC01641-202ENST00000445817 THOC2Q8NI27 1593 aaKnown RBP14.51□□□□□ -0.09
LINC01641-202ENST00000445817 ARHGAP35Q9NRY4 1499 aa14.5□□□□□ -0.09
LINC01641-202ENST00000445817 PBRM1Q86U86 1689 aa14.5□□□□□ -0.09
LINC01641-202ENST00000445817 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
LINC01641-202ENST00000445817 HRCP23327 699 aa14.47□□□□□ -0.09
LINC01641-202ENST00000445817 CTTNBP2Q8WZ74 1663 aa14.47□□□□□ -0.09
LINC01641-202ENST00000445817 ZNF608Q9ULD9 1512 aaPredicted RBP14.45□□□□□ -0.1
LINC01641-202ENST00000445817 EFCAB5A4FU69 1503 aa14.44□□□□□ -0.1
LINC01641-202ENST00000445817 P3H3Q8IVL6 736 aa14.43□□□□□ -0.1
LINC01641-202ENST00000445817 ADAMTS12P58397 1594 aa14.42□□□□□ -0.1
LINC01641-202ENST00000445817 RTN4Q9NQC3 1192 aaKnown RBP14.42□□□□□ -0.1
LINC01641-202ENST00000445817 EIF4G3O43432 1585 aaKnown RBP14.4□□□□□ -0.1
LINC01641-202ENST00000445817 FOXD1Q16676 465 aa14.39□□□□□ -0.11
LINC01641-202ENST00000445817 SNAPC4Q5SXM2 1469 aa14.38□□□□□ -0.11
LINC01641-202ENST00000445817 ZBTB22O15209 634 aa14.38□□□□□ -0.11
LINC01641-202ENST00000445817 ATP1B4Q9UN42 357 aaPredicted RBP14.38□□□□□ -0.11
LINC01641-202ENST00000445817 CHMP7Q8WUX9 453 aaPredicted RBP14.36□□□□□ -0.11
LINC01641-202ENST00000445817 FHOD3Q2V2M9 1422 aa14.36□□□□□ -0.11
LINC01641-202ENST00000445817 MAGI1Q96QZ7 1491 aaPredicted RBP14.36□□□□□ -0.11
LINC01641-202ENST00000445817 FMN1Q68DA7 1419 aa14.35□□□□□ -0.11
LINC01641-202ENST00000445817 ZEB1P37275 1124 aaPredicted RBP14.34□□□□□ -0.11
LINC01641-202ENST00000445817 FBLN2P98095 1184 aa14.33□□□□□ -0.12
LINC01641-202ENST00000445817 MAP3K1Q13233 1512 aa14.32□□□□□ -0.12
LINC01641-202ENST00000445817 IQGAP2Q13576 1575 aa14.32□□□□□ -0.12
LINC01641-202ENST00000445817 KANK4Q5T7N3 995 aaPredicted RBP14.32□□□□□ -0.12
LINC01641-202ENST00000445817 GRIN2AQ12879 1464 aa14.31□□□□□ -0.12
LINC01641-202ENST00000445817 PPP4R3CPQ6ZMV5 832 aa14.31□□□□□ -0.12
LINC01641-202ENST00000445817 SAMD9Q5K651 1589 aa14.3□□□□□ -0.12
LINC01641-202ENST00000445817 SYNJ2O15056 1496 aa14.3□□□□□ -0.12
LINC01641-202ENST00000445817 CASKIN1Q8WXD9 1431 aa14.3□□□□□ -0.12
LINC01641-202ENST00000445817 FYCO1Q9BQS8 1478 aa14.3□□□□□ -0.12
LINC01641-202ENST00000445817 KIAA0586Q9BVV6 1533 aa14.29□□□□□ -0.12
LINC01641-202ENST00000445817 TIAM1Q13009 1591 aa14.28□□□□□ -0.12
LINC01641-202ENST00000445817 PCF11O94913 1555 aaKnown RBP14.27□□□□□ -0.12
LINC01641-202ENST00000445817 HNRNPUL2Q1KMD3 747 aaKnown RBP14.25□□□□□ -0.13
LINC01641-202ENST00000445817 UGGT2Q9NYU1 1516 aa14.24□□□□□ -0.13
LINC01641-202ENST00000445817 LRRC9Q6ZRR7 1453 aa14.24□□□□□ -0.13
LINC01641-202ENST00000445817 CCER1Q8TC90 406 aaPredicted RBP14.23□□□□□ -0.13
LINC01641-202ENST00000445817 CFAP43Q8NDM7 1665 aa14.22□□□□□ -0.13
LINC01641-202ENST00000445817 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.2□□□□□ -0.14
LINC01641-202ENST00000445817 NUP160Q12769 1436 aa14.18□□□□□ -0.14
LINC01641-202ENST00000445817 CEP170Q5SW79 1584 aa14.18□□□□□ -0.14
LINC01641-202ENST00000445817 MTUS2Q5JR59 1369 aa14.18□□□□□ -0.14
LINC01641-202ENST00000445817 CARMIL2Q6F5E8 1435 aa14.17□□□□□ -0.14
LINC01641-202ENST00000445817 RRBP1Q9P2E9 1410 aaKnown RBP14.17□□□□□ -0.14
LINC01641-202ENST00000445817 JPH4Q96JJ6 628 aa14.17□□□□□ -0.14
LINC01641-202ENST00000445817 CCNB3Q8WWL7 1395 aa14.17□□□□□ -0.14
LINC01641-202ENST00000445817 CCDC18Q5T9S5 1454 aa14.16□□□□□ -0.14
LINC01641-202ENST00000445817 KIAA0556O60303 1618 aa14.15□□□□□ -0.14
LINC01641-202ENST00000445817 HECW1Q76N89 1606 aa14.15□□□□□ -0.14
LINC01641-202ENST00000445817 DISP1Q96F81 1524 aa14.14□□□□□ -0.15
LINC01641-202ENST00000445817 NPM3O75607 178 aaKnown RBP14.14□□□□□ -0.15
LINC01641-202ENST00000445817 FAM50AQ14320 339 aaKnown RBP14.1□□□□□ -0.15
LINC01641-202ENST00000445817 PHLDB1Q86UU1 1377 aa14.1□□□□□ -0.15
LINC01641-202ENST00000445817 ITGAEP38570 1179 aa14.09□□□□□ -0.15
LINC01641-202ENST00000445817 CDK11AQ9UQ88 783 aaPredicted RBP14.09□□□□□ -0.15
LINC01641-202ENST00000445817 EHBP1L1Q8N3D4 1523 aa14.08□□□□□ -0.16
LINC01641-202ENST00000445817 EPRSP07814 1512 aaKnown RBP14.08□□□□□ -0.16
LINC01641-202ENST00000445817 CHD1O14646 1710 aa14.07□□□□□ -0.16
LINC01641-202ENST00000445817 LRRIQ1Q96JM4 1722 aa14.06□□□□□ -0.16
LINC01641-202ENST00000445817 SUPT6HQ7KZ85 1726 aaKnown RBP14.05□□□□□ -0.16
LINC01641-202ENST00000445817 RAPGEF6Q8TEU7 1601 aa14.05□□□□□ -0.16
LINC01641-202ENST00000445817 ARID3CA6NKF2 412 aa14.05□□□□□ -0.16
LINC01641-202ENST00000445817 PRG4Q92954 1404 aaPredicted RBP14.04□□□□□ -0.16
LINC01641-202ENST00000445817 NCOA2Q15596 1464 aa14.03□□□□□ -0.16
LINC01641-202ENST00000445817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.03□□□□□ -0.16
LINC01641-202ENST00000445817 CDK13Q14004 1512 aaKnown RBP14.02□□□□□ -0.16
LINC01641-202ENST00000445817 AMER1Q5JTC6 1135 aaPredicted RBP14.02□□□□□ -0.16
LINC01641-202ENST00000445817 FGD6Q6ZV73 1430 aa14.01□□□□□ -0.17
LINC01641-202ENST00000445817 MYOM3Q5VTT5 1437 aa14□□□□□ -0.17
LINC01641-202ENST00000445817 NUP153P49790 1475 aaKnown RBP14□□□□□ -0.17
LINC01641-202ENST00000445817 PTPRGP23470 1445 aa14□□□□□ -0.17
LINC01641-202ENST00000445817 PLB1Q6P1J6 1458 aa13.98□□□□□ -0.17
LINC01641-202ENST00000445817 MAGI3Q5TCQ9 1506 aa13.97□□□□□ -0.17
LINC01641-202ENST00000445817 NCBP3Q53F19 620 aaKnown RBP13.97□□□□□ -0.17
LINC01641-202ENST00000445817 PLEKHD1A6NEE1 506 aa13.95□□□□□ -0.18
LINC01641-202ENST00000445817 SETD5Q9C0A6 1442 aa13.95□□□□□ -0.18
LINC01641-202ENST00000445817 ARHGEF11O15085 1522 aa13.95□□□□□ -0.18
LINC01641-202ENST00000445817 SHROOM2Q13796 1616 aa13.94□□□□□ -0.18
LINC01641-202ENST00000445817 ABCA8O94911 1581 aa13.94□□□□□ -0.18
LINC01641-202ENST00000445817 CLSPNQ9HAW4 1339 aa13.93□□□□□ -0.18
LINC01641-202ENST00000445817 TROQ12816 1431 aaPredicted RBP13.93□□□□□ -0.18
LINC01641-202ENST00000445817 MIA2Q96PC5 1412 aa13.93□□□□□ -0.18
LINC01641-202ENST00000445817 PTPN23Q9H3S7 1636 aa13.91□□□□□ -0.18
LINC01641-202ENST00000445817 RAB3GAP2Q9H2M9 1393 aa13.91□□□□□ -0.18
LINC01641-202ENST00000445817 DHX57Q6P158 1386 aaKnown RBP13.89□□□□□ -0.19
LINC01641-202ENST00000445817 CLASP1Q7Z460 1538 aa13.89□□□□□ -0.19
LINC01641-202ENST00000445817 UACAQ9BZF9 1416 aa13.89□□□□□ -0.19
LINC01641-202ENST00000445817 ATP10BO94823 1461 aa13.88□□□□□ -0.19
LINC01641-202ENST00000445817 TCOF1Q13428 1488 aaKnown RBP13.88□□□□□ -0.19
LINC01641-202ENST00000445817 CFDP1Q9UEE9 299 aaPredicted RBP13.85□□□□□ -0.19
LINC01641-202ENST00000445817 OSCARQ8IYS5 282 aa13.83□□□□□ -0.19
LINC01641-202ENST00000445817 ADCY10Q96PN6 1610 aa13.83□□□□□ -0.19
LINC01641-202ENST00000445817 ITSN2Q9NZM3 1697 aa13.82□□□□□ -0.2
LINC01641-202ENST00000445817 ERCC6L2Q5T890 1561 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms