RNA–Protein interactions for RNA: ENST00000445644.5

COMMD1-204, Transcript of copper metabolism domain containing 1, humanhuman

TSL 4

Gene COMMD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-204ENST00000445644 JPH4Q96JJ6 628 aa32.39■■■□□ 2.78
COMMD1-204ENST00000445644 CARMIL1Q5VZK9 1371 aa32.39■■■□□ 2.78
COMMD1-204ENST00000445644 KIAA0586Q9BVV6 1533 aa32.37■■■□□ 2.77
COMMD1-204ENST00000445644 TRHP20396 242 aaPredicted RBP32.29■■■□□ 2.76
COMMD1-204ENST00000445644 RAPGEF2Q9Y4G8 1499 aa32.19■■■□□ 2.74
COMMD1-204ENST00000445644 IQGAP2Q13576 1575 aa32.19■■■□□ 2.74
COMMD1-204ENST00000445644 ADCY10Q96PN6 1610 aa32.12■■■□□ 2.73
COMMD1-204ENST00000445644 CTTNBP2Q8WZ74 1663 aa32.07■■■□□ 2.72
COMMD1-204ENST00000445644 KIF13AQ9H1H9 1805 aa32.05■■■□□ 2.72
COMMD1-204ENST00000445644 DISP1Q96F81 1524 aa32.02■■■□□ 2.72
COMMD1-204ENST00000445644 PRXQ9BXM0 1461 aa32.02■■■□□ 2.72
COMMD1-204ENST00000445644 UGGT2Q9NYU1 1516 aa32■■■□□ 2.71
COMMD1-204ENST00000445644 CARMIL2Q6F5E8 1435 aa31.97■■■□□ 2.71
COMMD1-204ENST00000445644 TNIKQ9UKE5 1360 aa31.94■■■□□ 2.7
COMMD1-204ENST00000445644 MAPKBP1O60336 1514 aa31.93■■■□□ 2.7
COMMD1-204ENST00000445644 KIAA0556O60303 1618 aa31.93■■■□□ 2.7
COMMD1-204ENST00000445644 PTPRGP23470 1445 aa31.92■■■□□ 2.7
COMMD1-204ENST00000445644 TTBK1Q5TCY1 1321 aaPredicted RBP31.84■■■□□ 2.69
COMMD1-204ENST00000445644 DIP2BQ9P265 1576 aa31.84■■■□□ 2.69
COMMD1-204ENST00000445644 ABCC10Q5T3U5 1492 aa31.81■■■□□ 2.68
COMMD1-204ENST00000445644 NPM1P06748 294 aaKnown RBP eCLIP31.79■■■□□ 2.68
COMMD1-204ENST00000445644 UHRF1BP1LA0JNW5 1464 aa31.78■■■□□ 2.68
COMMD1-204ENST00000445644 ABCC2Q92887 1545 aa31.77■■■□□ 2.68
COMMD1-204ENST00000445644 CSRNP3Q8WYN3 585 aa31.76■■■□□ 2.67
COMMD1-204ENST00000445644 UACAQ9BZF9 1416 aa31.75■■■□□ 2.67
COMMD1-204ENST00000445644 EEA1Q15075 1411 aa31.74■■■□□ 2.67
COMMD1-204ENST00000445644 GOLGA3Q08378 1498 aa31.68■■■□□ 2.66
COMMD1-204ENST00000445644 FAM69CQ0P6D2 419 aa31.67■■■□□ 2.66
COMMD1-204ENST00000445644 ZCCHC11Q5TAX3 1644 aaKnown RBP31.67■■■□□ 2.66
COMMD1-204ENST00000445644 KDM5BQ9UGL1 1544 aa31.65■■■□□ 2.66
COMMD1-204ENST00000445644 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
COMMD1-204ENST00000445644 PLB1Q6P1J6 1458 aa31.61■■■□□ 2.65
COMMD1-204ENST00000445644 ASXL2Q76L83 1435 aa31.61■■■□□ 2.65
COMMD1-204ENST00000445644 TSPOAP1O95153 1857 aa31.61■■■□□ 2.65
COMMD1-204ENST00000445644 ABCA8O94911 1581 aa31.6■■■□□ 2.65
COMMD1-204ENST00000445644 SAMD9Q5K651 1589 aa31.6■■■□□ 2.65
COMMD1-204ENST00000445644 KIF21BO75037 1637 aa31.59■■■□□ 2.65
COMMD1-204ENST00000445644 FAM9AQ8IZU1 332 aaPredicted RBP31.58■■■□□ 2.65
COMMD1-204ENST00000445644 GLI2P10070 1586 aa31.53■■■□□ 2.64
COMMD1-204ENST00000445644 PPRC1Q5VV67 1664 aaKnown RBP31.51■■■□□ 2.64
COMMD1-204ENST00000445644 EPRSP07814 1512 aaKnown RBP31.45■■■□□ 2.63
COMMD1-204ENST00000445644 P3H3Q8IVL6 736 aa31.44■■■□□ 2.62
COMMD1-204ENST00000445644 MAP3K4Q9Y6R4 1608 aa31.43■■■□□ 2.62
COMMD1-204ENST00000445644 KDM6BO15054 1643 aa31.39■■■□□ 2.62
COMMD1-204ENST00000445644 WDR7Q9Y4E6 1490 aa31.39■■■□□ 2.62
COMMD1-204ENST00000445644 RAPGEF6Q8TEU7 1601 aa31.35■■■□□ 2.61
COMMD1-204ENST00000445644 FHOD3Q2V2M9 1422 aa31.3■■■□□ 2.6
COMMD1-204ENST00000445644 RANGAP1P46060 587 aaPredicted RBP31.29■■■□□ 2.6
COMMD1-204ENST00000445644 EFCAB5A4FU69 1503 aa31.29■■■□□ 2.6
COMMD1-204ENST00000445644 ATP10BO94823 1461 aa31.28■■■□□ 2.6
COMMD1-204ENST00000445644 CFAP43Q8NDM7 1665 aa31.25■■■□□ 2.59
COMMD1-204ENST00000445644 EHMT2Q96KQ7 1210 aa31.23■■■□□ 2.59
COMMD1-204ENST00000445644 ARID3CA6NKF2 412 aa31.21■■■□□ 2.59
COMMD1-204ENST00000445644 NUP153P49790 1475 aaKnown RBP31.21■■■□□ 2.59
COMMD1-204ENST00000445644 TEX14Q8IWB6 1497 aa31.15■■■□□ 2.58
COMMD1-204ENST00000445644 COL17A1Q9UMD9 1497 aaPredicted RBP31.15■■■□□ 2.58
COMMD1-204ENST00000445644 KCNH8Q96L42 1107 aa31.13■■■□□ 2.57
COMMD1-204ENST00000445644 UBTFP17480 764 aaKnown RBP31.12■■■□□ 2.57
COMMD1-204ENST00000445644 MAGI3Q5TCQ9 1506 aa31.11■■■□□ 2.57
COMMD1-204ENST00000445644 CD109Q6YHK3 1445 aa31.1■■■□□ 2.57
COMMD1-204ENST00000445644 ABCA9Q8IUA7 1624 aa31.09■■■□□ 2.57
COMMD1-204ENST00000445644 ARHGAP35Q9NRY4 1499 aa31.09■■■□□ 2.57
COMMD1-204ENST00000445644 CDK13Q14004 1512 aaKnown RBP30.97■■■□□ 2.55
COMMD1-204ENST00000445644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.95■■■□□ 2.55
COMMD1-204ENST00000445644 HNRNPUL2Q1KMD3 747 aaKnown RBP30.95■■■□□ 2.55
COMMD1-204ENST00000445644 LRRIQ1Q96JM4 1722 aa30.94■■■□□ 2.54
COMMD1-204ENST00000445644 AEBP2Q6ZN18 517 aaPredicted RBP30.93■■■□□ 2.54
COMMD1-204ENST00000445644 HECW1Q76N89 1606 aa30.93■■■□□ 2.54
COMMD1-204ENST00000445644 FMN1Q68DA7 1419 aa30.92■■■□□ 2.54
COMMD1-204ENST00000445644 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.86■■■□□ 2.53
COMMD1-204ENST00000445644 ARAP3Q8WWN8 1544 aa30.86■■■□□ 2.53
COMMD1-204ENST00000445644 TTC37Q6PGP7 1564 aa30.85■■■□□ 2.53
COMMD1-204ENST00000445644 KDM4FA0A1W2PPD8 638 aa30.83■■■□□ 2.53
COMMD1-204ENST00000445644 PLEKHD1A6NEE1 506 aa30.82■■■□□ 2.52
COMMD1-204ENST00000445644 PCF11O94913 1555 aaKnown RBP30.79■■■□□ 2.52
COMMD1-204ENST00000445644 NEO1Q92859 1461 aa30.78■■■□□ 2.52
COMMD1-204ENST00000445644 FRMPD1Q5SYB0 1578 aa30.76■■■□□ 2.52
COMMD1-204ENST00000445644 ATP1B4Q9UN42 357 aaPredicted RBP30.73■■■□□ 2.51
COMMD1-204ENST00000445644 PHLDB1Q86UU1 1377 aa30.73■■■□□ 2.51
COMMD1-204ENST00000445644 ADGRL1O94910 1474 aa30.72■■■□□ 2.51
COMMD1-204ENST00000445644 KIF14Q15058 1648 aa30.72■■■□□ 2.51
COMMD1-204ENST00000445644 CFAP74Q9C0B2 1584 aa30.7■■■□□ 2.5
COMMD1-204ENST00000445644 RICTORQ6R327 1708 aa30.68■■■□□ 2.5
COMMD1-204ENST00000445644 CLIP1P30622 1438 aa30.68■■■□□ 2.5
COMMD1-204ENST00000445644 CASKIN1Q8WXD9 1431 aa30.68■■■□□ 2.5
COMMD1-204ENST00000445644 FANCAO15360 1455 aa30.66■■■□□ 2.5
COMMD1-204ENST00000445644 MYO5CQ9NQX4 1742 aa30.66■■■□□ 2.5
COMMD1-204ENST00000445644 RAPGEF3O95398 923 aa30.62■■■□□ 2.49
COMMD1-204ENST00000445644 TROQ12816 1431 aaPredicted RBP30.62■■■□□ 2.49
COMMD1-204ENST00000445644 AKNAQ7Z591 1439 aa30.62■■■□□ 2.49
COMMD1-204ENST00000445644 FYCO1Q9BQS8 1478 aa30.61■■■□□ 2.49
COMMD1-204ENST00000445644 CCDC18Q5T9S5 1454 aa30.59■■■□□ 2.49
COMMD1-204ENST00000445644 PLCH2O75038 1416 aa30.59■■■□□ 2.49
COMMD1-204ENST00000445644 CDK11AQ9UQ88 783 aaPredicted RBP30.55■■■□□ 2.48
COMMD1-204ENST00000445644 DENND4BO75064 1496 aaPredicted RBP30.55■■■□□ 2.48
COMMD1-204ENST00000445644 CDC42BPBQ9Y5S2 1711 aa30.53■■■□□ 2.48
COMMD1-204ENST00000445644 ZMYM4Q5VZL5 1548 aa30.5■■■□□ 2.47
COMMD1-204ENST00000445644 ARHGEF40Q8TER5 1519 aa30.5■■■□□ 2.47
COMMD1-204ENST00000445644 CEP162Q5TB80 1403 aa30.47■■■□□ 2.47
COMMD1-204ENST00000445644 PREX2Q70Z35 1606 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms