RNA–Protein interactions for RNA: ENST00000445609.6

NPHP1-207, Transcript of nephrocystin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP1, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-207ENST00000445609 NUP160Q12769 1436 aa15.22■□□□□ 0.03
NPHP1-207ENST00000445609 CLIP1P30622 1438 aa15.21■□□□□ 0.03
NPHP1-207ENST00000445609 KIAA0586Q9BVV6 1533 aa15.21■□□□□ 0.02
NPHP1-207ENST00000445609 CTTNBP2Q8WZ74 1663 aa15.19■□□□□ 0.02
NPHP1-207ENST00000445609 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
NPHP1-207ENST00000445609 CHD1O14646 1710 aa15.18■□□□□ 0.02
NPHP1-207ENST00000445609 IQGAP2Q13576 1575 aa15.16■□□□□ 0.02
NPHP1-207ENST00000445609 JPH4Q96JJ6 628 aa15.12■□□□□ 0.01
NPHP1-207ENST00000445609 ARHGAP35Q9NRY4 1499 aa15.12■□□□□ 0.01
NPHP1-207ENST00000445609 OSCARQ8IYS5 282 aa15.11■□□□□ 0.01
NPHP1-207ENST00000445609 UGGT2Q9NYU1 1516 aa15.1■□□□□ 0.01
NPHP1-207ENST00000445609 P3H3Q8IVL6 736 aa15.1■□□□□ 0.01
NPHP1-207ENST00000445609 EFCAB5A4FU69 1503 aa15.09■□□□□ 0.01
NPHP1-207ENST00000445609 ARAP1Q96P48 1450 aa15.07■□□□□ 0
NPHP1-207ENST00000445609 CLASP1Q7Z460 1538 aa15.06■□□□□ 0
NPHP1-207ENST00000445609 SAMD9Q5K651 1589 aa15.06■□□□□ 0
NPHP1-207ENST00000445609 FHOD3Q2V2M9 1422 aa15.04■□□□□ -0
NPHP1-207ENST00000445609 CARMIL2Q6F5E8 1435 aa15.04■□□□□ -0
NPHP1-207ENST00000445609 DISP1Q96F81 1524 aa15.04■□□□□ -0
NPHP1-207ENST00000445609 VPS8Q8N3P4 1428 aa15.03■□□□□ -0
NPHP1-207ENST00000445609 PRG4Q92954 1404 aaPredicted RBP15.03■□□□□ -0
NPHP1-207ENST00000445609 SHROOM2Q13796 1616 aa15□□□□□ -0.01
NPHP1-207ENST00000445609 KIAA0556O60303 1618 aa15□□□□□ -0.01
NPHP1-207ENST00000445609 FMN1Q68DA7 1419 aa14.99□□□□□ -0.01
NPHP1-207ENST00000445609 TTBK1Q5TCY1 1321 aaPredicted RBP14.95□□□□□ -0.02
NPHP1-207ENST00000445609 PTPRGP23470 1445 aa14.92□□□□□ -0.02
NPHP1-207ENST00000445609 APLP2Q06481 763 aa14.92□□□□□ -0.02
NPHP1-207ENST00000445609 ERCC6L2Q5T890 1561 aa14.92□□□□□ -0.02
NPHP1-207ENST00000445609 CASKIN1Q8WXD9 1431 aa14.91□□□□□ -0.02
NPHP1-207ENST00000445609 ATP1B4Q9UN42 357 aaPredicted RBP14.91□□□□□ -0.02
NPHP1-207ENST00000445609 FYCO1Q9BQS8 1478 aa14.89□□□□□ -0.03
NPHP1-207ENST00000445609 PCF11O94913 1555 aaKnown RBP14.88□□□□□ -0.03
NPHP1-207ENST00000445609 PLB1Q6P1J6 1458 aa14.85□□□□□ -0.03
NPHP1-207ENST00000445609 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
NPHP1-207ENST00000445609 RAPGEF6Q8TEU7 1601 aa14.82□□□□□ -0.04
NPHP1-207ENST00000445609 UACAQ9BZF9 1416 aa14.82□□□□□ -0.04
NPHP1-207ENST00000445609 MAP3K1Q13233 1512 aa14.81□□□□□ -0.04
NPHP1-207ENST00000445609 ABCA8O94911 1581 aa14.81□□□□□ -0.04
NPHP1-207ENST00000445609 HECW1Q76N89 1606 aa14.81□□□□□ -0.04
NPHP1-207ENST00000445609 ARHGEF11O15085 1522 aa14.81□□□□□ -0.04
NPHP1-207ENST00000445609 NUP153P49790 1475 aaKnown RBP14.8□□□□□ -0.04
NPHP1-207ENST00000445609 ARID3CA6NKF2 412 aa14.8□□□□□ -0.04
NPHP1-207ENST00000445609 EPRSP07814 1512 aaKnown RBP14.79□□□□□ -0.04
NPHP1-207ENST00000445609 CCDC18Q5T9S5 1454 aa14.79□□□□□ -0.04
NPHP1-207ENST00000445609 KANK4Q5T7N3 995 aaPredicted RBP14.79□□□□□ -0.04
NPHP1-207ENST00000445609 TIAM1Q13009 1591 aa14.78□□□□□ -0.04
NPHP1-207ENST00000445609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
NPHP1-207ENST00000445609 HNRNPUL2Q1KMD3 747 aaKnown RBP14.76□□□□□ -0.05
NPHP1-207ENST00000445609 ABCC2Q92887 1545 aa14.75□□□□□ -0.05
NPHP1-207ENST00000445609 UHRF1BP1LA0JNW5 1464 aa14.75□□□□□ -0.05
NPHP1-207ENST00000445609 CDK13Q14004 1512 aaKnown RBP14.74□□□□□ -0.05
NPHP1-207ENST00000445609 LRRC9Q6ZRR7 1453 aa14.74□□□□□ -0.05
NPHP1-207ENST00000445609 CDK11AQ9UQ88 783 aaPredicted RBP14.74□□□□□ -0.05
NPHP1-207ENST00000445609 ATP10BO94823 1461 aa14.74□□□□□ -0.05
NPHP1-207ENST00000445609 CFAP43Q8NDM7 1665 aa14.73□□□□□ -0.05
NPHP1-207ENST00000445609 LRRIQ1Q96JM4 1722 aa14.73□□□□□ -0.05
NPHP1-207ENST00000445609 RIMBP3CA6NJZ7 1639 aa14.73□□□□□ -0.05
NPHP1-207ENST00000445609 RIMBP3BA6NNM3 1639 aa14.73□□□□□ -0.05
NPHP1-207ENST00000445609 RIMBP3Q9UFD9 1639 aa14.73□□□□□ -0.05
NPHP1-207ENST00000445609 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
NPHP1-207ENST00000445609 CYB5RLQ6IPT4 315 aa14.71□□□□□ -0.05
NPHP1-207ENST00000445609 PLEKHD1A6NEE1 506 aa14.69□□□□□ -0.06
NPHP1-207ENST00000445609 KDM5BQ9UGL1 1544 aa14.69□□□□□ -0.06
NPHP1-207ENST00000445609 ADCY10Q96PN6 1610 aa14.68□□□□□ -0.06
NPHP1-207ENST00000445609 MAGI3Q5TCQ9 1506 aa14.67□□□□□ -0.06
NPHP1-207ENST00000445609 NPM1P06748 294 aaKnown RBP eCLIP14.66□□□□□ -0.06
NPHP1-207ENST00000445609 EHBP1L1Q8N3D4 1523 aa14.66□□□□□ -0.06
NPHP1-207ENST00000445609 TROQ12816 1431 aaPredicted RBP14.65□□□□□ -0.06
NPHP1-207ENST00000445609 TRIM26Q12899 539 aaPredicted RBP14.64□□□□□ -0.07
NPHP1-207ENST00000445609 ZCCHC11Q5TAX3 1644 aaKnown RBP14.62□□□□□ -0.07
NPHP1-207ENST00000445609 DNAJC5Q9H3Z4 198 aa14.61□□□□□ -0.07
NPHP1-207ENST00000445609 NCOA2Q15596 1464 aa14.6□□□□□ -0.07
NPHP1-207ENST00000445609 PHLDB1Q86UU1 1377 aa14.59□□□□□ -0.07
NPHP1-207ENST00000445609 SUPT6HQ7KZ85 1726 aaKnown RBP14.59□□□□□ -0.07
NPHP1-207ENST00000445609 KCNH8Q96L42 1107 aa14.57□□□□□ -0.08
NPHP1-207ENST00000445609 ASXL2Q76L83 1435 aa14.57□□□□□ -0.08
NPHP1-207ENST00000445609 WDR7Q9Y4E6 1490 aa14.56□□□□□ -0.08
NPHP1-207ENST00000445609 CCNB3Q8WWL7 1395 aa14.55□□□□□ -0.08
NPHP1-207ENST00000445609 KIF14Q15058 1648 aa14.54□□□□□ -0.08
NPHP1-207ENST00000445609 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
NPHP1-207ENST00000445609 PCGF6Q9BYE7 350 aa14.54□□□□□ -0.08
NPHP1-207ENST00000445609 RRBP1Q9P2E9 1410 aaKnown RBP14.53□□□□□ -0.08
NPHP1-207ENST00000445609 ABCC10Q5T3U5 1492 aa14.52□□□□□ -0.09
NPHP1-207ENST00000445609 FGD6Q6ZV73 1430 aa14.51□□□□□ -0.09
NPHP1-207ENST00000445609 MAPKBP1O60336 1514 aa14.5□□□□□ -0.09
NPHP1-207ENST00000445609 GPATCH8Q9UKJ3 1502 aaKnown RBP14.5□□□□□ -0.09
NPHP1-207ENST00000445609 MIA2Q96PC5 1412 aa14.49□□□□□ -0.09
NPHP1-207ENST00000445609 CFDP1Q9UEE9 299 aaPredicted RBP14.49□□□□□ -0.09
NPHP1-207ENST00000445609 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.49□□□□□ -0.09
NPHP1-207ENST00000445609 FAM50AQ14320 339 aaKnown RBP14.48□□□□□ -0.09
NPHP1-207ENST00000445609 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.46□□□□□ -0.09
NPHP1-207ENST00000445609 TTC37Q6PGP7 1564 aa14.45□□□□□ -0.1
NPHP1-207ENST00000445609 ZNF777Q9ULD5 760 aaPredicted RBP14.44□□□□□ -0.1
NPHP1-207ENST00000445609 PLCH2O75038 1416 aa14.43□□□□□ -0.1
NPHP1-207ENST00000445609 ITSN2Q9NZM3 1697 aa14.43□□□□□ -0.1
NPHP1-207ENST00000445609 ZNF644Q9H582 1327 aaPredicted RBP14.43□□□□□ -0.1
NPHP1-207ENST00000445609 TCOF1Q13428 1488 aaKnown RBP14.43□□□□□ -0.1
NPHP1-207ENST00000445609 PTPN23Q9H3S7 1636 aa14.43□□□□□ -0.1
NPHP1-207ENST00000445609 ABCA9Q8IUA7 1624 aa14.42□□□□□ -0.1
NPHP1-207ENST00000445609 CDC42BPAQ5VT25 1732 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms