RNA–Protein interactions for RNA: ENST00000445027.2

LINC01047-202, Transcript of long intergenic non-protein coding RNA 1047, humanhuman

TSL 5

Gene LINC01047, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01047-202ENST00000445027 OTUD5Q96G74 571 aa10.77□□□□□ -0.69
LINC01047-202ENST00000445027 SMARCA2P51531 1590 aa10.77□□□□□ -0.69
LINC01047-202ENST00000445027 BAZ1BQ9UIG0 1483 aaKnown RBP10.74□□□□□ -0.69
LINC01047-202ENST00000445027 DCBLD2Q96PD2 775 aa10.73□□□□□ -0.69
LINC01047-202ENST00000445027 ZNF692Q9BU19 519 aaPredicted RBP10.73□□□□□ -0.69
LINC01047-202ENST00000445027 CLCN6P51797 869 aa10.72□□□□□ -0.69
LINC01047-202ENST00000445027 SPDYE2BA6NHP3 402 aa10.7□□□□□ -0.7
LINC01047-202ENST00000445027 SPDYE6P0CI01 402 aa10.7□□□□□ -0.7
LINC01047-202ENST00000445027 SPDYE2Q495Y8 402 aa10.7□□□□□ -0.7
LINC01047-202ENST00000445027 HMGXB3Q12766 1538 aa10.69□□□□□ -0.7
LINC01047-202ENST00000445027 TOP2AP11388 1531 aaKnown RBP10.66□□□□□ -0.7
LINC01047-202ENST00000445027 CCDC88BA6NC98 1476 aa10.66□□□□□ -0.7
LINC01047-202ENST00000445027 CLEC11AQ9Y240 323 aa10.64□□□□□ -0.71
LINC01047-202ENST00000445027 PROM2Q8N271 834 aa10.62□□□□□ -0.71
LINC01047-202ENST00000445027 SSUH2Q9Y2M2 353 aa10.62□□□□□ -0.71
LINC01047-202ENST00000445027 SPDYE1Q8NFV5 336 aaPredicted RBP10.59□□□□□ -0.71
LINC01047-202ENST00000445027 CADPSQ9ULU8 1353 aa10.58□□□□□ -0.72
LINC01047-202ENST00000445027 FBXO3Q9UK99 471 aa10.55□□□□□ -0.72
LINC01047-202ENST00000445027 NESP48681 1621 aa10.55□□□□□ -0.72
LINC01047-202ENST00000445027 CD44P16070 742 aaKnown RBP10.52□□□□□ -0.73
LINC01047-202ENST00000445027 CFTRP13569 1480 aa10.51□□□□□ -0.73
LINC01047-202ENST00000445027 POTEB2H3BUK9 544 aa10.5□□□□□ -0.73
LINC01047-202ENST00000445027 CHADLQ6NUI6 762 aa10.49□□□□□ -0.73
LINC01047-202ENST00000445027 VASPP50552 380 aaPredicted RBP10.44□□□□□ -0.74
LINC01047-202ENST00000445027 PDS5BQ9NTI5 1447 aa10.42□□□□□ -0.74
LINC01047-202ENST00000445027 FAM163AQ96GL9 167 aaPredicted RBP10.42□□□□□ -0.74
LINC01047-202ENST00000445027 LAMC3Q9Y6N6 1575 aa10.42□□□□□ -0.74
LINC01047-202ENST00000445027 FANCD2Q9BXW9 1451 aa10.39□□□□□ -0.75
LINC01047-202ENST00000445027 STAG3Q9UJ98 1225 aa10.39□□□□□ -0.75
LINC01047-202ENST00000445027 LCE2DQ5TA82 110 aaPredicted RBP10.37□□□□□ -0.75
LINC01047-202ENST00000445027 ERCC6Q03468 1493 aa10.34□□□□□ -0.75
LINC01047-202ENST00000445027 CDAN1Q8IWY9 1227 aa10.33□□□□□ -0.76
LINC01047-202ENST00000445027 PLCD3Q8N3E9 789 aa10.33□□□□□ -0.76
LINC01047-202ENST00000445027 MAMSTRQ6ZN01 415 aa10.32□□□□□ -0.76
LINC01047-202ENST00000445027 MIER1Q8N108 512 aa10.32□□□□□ -0.76
LINC01047-202ENST00000445027 CEP164Q9UPV0 1460 aa10.3□□□□□ -0.76
LINC01047-202ENST00000445027 IFNLR1Q8IU57 520 aaPredicted RBP10.3□□□□□ -0.76
LINC01047-202ENST00000445027 RTN4Q9NQC3 1192 aaKnown RBP10.3□□□□□ -0.76
LINC01047-202ENST00000445027 PRR29P0C7W0 189 aa10.29□□□□□ -0.76
LINC01047-202ENST00000445027 URB2Q14146 1524 aaKnown RBP10.28□□□□□ -0.76
LINC01047-202ENST00000445027 AMER1Q5JTC6 1135 aaPredicted RBP10.28□□□□□ -0.76
LINC01047-202ENST00000445027 KLHL34Q8N239 644 aa10.28□□□□□ -0.76
LINC01047-202ENST00000445027 TRIM41Q8WV44 630 aa10.28□□□□□ -0.76
LINC01047-202ENST00000445027 ABCC8Q09428 1581 aa10.27□□□□□ -0.76
LINC01047-202ENST00000445027 WRNQ14191 1432 aaPredicted RBP eCLIP10.27□□□□□ -0.77
LINC01047-202ENST00000445027 ZNF579Q8NAF0 562 aaKnown RBP10.27□□□□□ -0.77
LINC01047-202ENST00000445027 MRC2Q9UBG0 1479 aa10.27□□□□□ -0.77
LINC01047-202ENST00000445027 KIF21AQ7Z4S6 1674 aa10.27□□□□□ -0.77
LINC01047-202ENST00000445027 CUX1P39880 1505 aa10.25□□□□□ -0.77
LINC01047-202ENST00000445027 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
LINC01047-202ENST00000445027 TOPBP1Q92547 1522 aa10.24□□□□□ -0.77
LINC01047-202ENST00000445027 PLEKHG5O94827 1062 aa10.23□□□□□ -0.77
LINC01047-202ENST00000445027 GALR2O43603 387 aaPredicted RBP10.21□□□□□ -0.77
LINC01047-202ENST00000445027 MMRN1Q13201 1228 aa10.21□□□□□ -0.77
LINC01047-202ENST00000445027 CUX2O14529 1486 aa10.2□□□□□ -0.78
LINC01047-202ENST00000445027 WDR62O43379 1518 aa10.2□□□□□ -0.78
LINC01047-202ENST00000445027 SOGA1O94964 1423 aa10.2□□□□□ -0.78
LINC01047-202ENST00000445027 PRDM2Q13029 1718 aa10.2□□□□□ -0.78
LINC01047-202ENST00000445027 THOC2Q8NI27 1593 aaKnown RBP10.2□□□□□ -0.78
LINC01047-202ENST00000445027 SYNJ1O43426 1573 aa10.19□□□□□ -0.78
LINC01047-202ENST00000445027 RAD54L2Q9Y4B4 1467 aa10.19□□□□□ -0.78
LINC01047-202ENST00000445027 DNMBPQ6XZF7 1577 aa10.18□□□□□ -0.78
LINC01047-202ENST00000445027 ZRANB1Q9UGI0 708 aa10.18□□□□□ -0.78
LINC01047-202ENST00000445027 POLA1P09884 1462 aaPredicted RBP10.17□□□□□ -0.78
LINC01047-202ENST00000445027 FGD5Q6ZNL6 1462 aa10.17□□□□□ -0.78
LINC01047-202ENST00000445027 DNAJC5Q9H3Z4 198 aa10.17□□□□□ -0.78
LINC01047-202ENST00000445027 TOP2BQ02880 1626 aa10.16□□□□□ -0.78
LINC01047-202ENST00000445027 SPOCK2Q92563 424 aa10.16□□□□□ -0.78
LINC01047-202ENST00000445027 SCUBE2Q9NQ36 999 aa10.16□□□□□ -0.78
LINC01047-202ENST00000445027 TDRD9Q8NDG6 1382 aaKnown RBP10.15□□□□□ -0.78
LINC01047-202ENST00000445027 CREBZFQ9NS37 354 aa10.15□□□□□ -0.78
LINC01047-202ENST00000445027 ZBTB47Q9UFB7 747 aaPredicted RBP10.13□□□□□ -0.79
LINC01047-202ENST00000445027 AQRO60306 1485 aaKnown RBP eCLIP10.12□□□□□ -0.79
LINC01047-202ENST00000445027 POTEJP0CG39 1038 aa10.12□□□□□ -0.79
LINC01047-202ENST00000445027 ZNF608Q9ULD9 1512 aaPredicted RBP10.12□□□□□ -0.79
LINC01047-202ENST00000445027 IFT140Q96RY7 1462 aa10.11□□□□□ -0.79
LINC01047-202ENST00000445027 METRNQ9UJH8 293 aa10.11□□□□□ -0.79
LINC01047-202ENST00000445027 RUSC2Q8N2Y8 1516 aa10.11□□□□□ -0.79
LINC01047-202ENST00000445027 BIVM-ERCC5R4GMW8 1640 aa10.11□□□□□ -0.79
LINC01047-202ENST00000445027 FAM9AQ8IZU1 332 aaPredicted RBP10.1□□□□□ -0.79
LINC01047-202ENST00000445027 SPNS2Q8IVW8 549 aa10.09□□□□□ -0.79
LINC01047-202ENST00000445027 PELP1Q8IZL8 1130 aaKnown RBP10.09□□□□□ -0.79
LINC01047-202ENST00000445027 IGF1RP08069 1367 aa10.09□□□□□ -0.79
LINC01047-202ENST00000445027 TARBP1Q13395 1621 aaKnown RBP10.08□□□□□ -0.8
LINC01047-202ENST00000445027 C7P10643 843 aa10.08□□□□□ -0.8
LINC01047-202ENST00000445027 ABCA10Q8WWZ4 1543 aa10.07□□□□□ -0.8
LINC01047-202ENST00000445027 SLC39A7Q92504 469 aa10.06□□□□□ -0.8
LINC01047-202ENST00000445027 MNX1P50219 401 aaPredicted RBP10.04□□□□□ -0.8
LINC01047-202ENST00000445027 CIZ1Q9ULV3 898 aaPredicted RBP10.04□□□□□ -0.8
LINC01047-202ENST00000445027 KIF27Q86VH2 1401 aa10.03□□□□□ -0.8
LINC01047-202ENST00000445027 GAPVD1Q14C86 1478 aa10.03□□□□□ -0.8
LINC01047-202ENST00000445027 PKD2Q13563 968 aa10.01□□□□□ -0.81
LINC01047-202ENST00000445027 NUBP1P53384 320 aa9.99□□□□□ -0.81
LINC01047-202ENST00000445027 GRIN2BQ13224 1484 aa9.98□□□□□ -0.81
LINC01047-202ENST00000445027 LOC105371045A0A1W2PR82 267 aa9.98□□□□□ -0.81
LINC01047-202ENST00000445027 NPM1P06748 294 aaKnown RBP eCLIP9.98□□□□□ -0.81
LINC01047-202ENST00000445027 CARMIL1Q5VZK9 1371 aa9.98□□□□□ -0.81
LINC01047-202ENST00000445027 DCAF8Q5TAQ9 597 aa9.97□□□□□ -0.81
LINC01047-202ENST00000445027 CHMP7Q8WUX9 453 aaPredicted RBP9.97□□□□□ -0.81
LINC01047-202ENST00000445027 ECM2O94769 699 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms