RNA–Protein interactions for RNA: ENST00000444987.1

LRRC42-204, Transcript of leucine rich repeat containing 42, humanhuman

TSL 5

Gene LRRC42, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-204ENST00000444987 JPH4Q96JJ6 628 aa32.01■■■□□ 2.71
LRRC42-204ENST00000444987 ERCC6L2Q5T890 1561 aa31.98■■■□□ 2.71
LRRC42-204ENST00000444987 RAPGEF2Q9Y4G8 1499 aa31.97■■■□□ 2.71
LRRC42-204ENST00000444987 PRG4Q92954 1404 aaPredicted RBP31.95■■■□□ 2.71
LRRC42-204ENST00000444987 EEA1Q15075 1411 aa31.84■■■□□ 2.69
LRRC42-204ENST00000444987 IQGAP2Q13576 1575 aa31.83■■■□□ 2.69
LRRC42-204ENST00000444987 PRXQ9BXM0 1461 aa31.83■■■□□ 2.69
LRRC42-204ENST00000444987 CHIC1Q5VXU3 224 aa31.73■■■□□ 2.67
LRRC42-204ENST00000444987 CSRNP3Q8WYN3 585 aa31.73■■■□□ 2.67
LRRC42-204ENST00000444987 CARMIL2Q6F5E8 1435 aa31.72■■■□□ 2.67
LRRC42-204ENST00000444987 CTTNBP2Q8WZ74 1663 aa31.71■■■□□ 2.67
LRRC42-204ENST00000444987 UGGT2Q9NYU1 1516 aa31.67■■■□□ 2.66
LRRC42-204ENST00000444987 TNIKQ9UKE5 1360 aa31.6■■■□□ 2.65
LRRC42-204ENST00000444987 DISP1Q96F81 1524 aa31.59■■■□□ 2.65
LRRC42-204ENST00000444987 PTPRGP23470 1445 aa31.57■■■□□ 2.64
LRRC42-204ENST00000444987 TRHP20396 242 aaPredicted RBP31.54■■■□□ 2.64
LRRC42-204ENST00000444987 KIAA0556O60303 1618 aa31.52■■■□□ 2.64
LRRC42-204ENST00000444987 GOLGA3Q08378 1498 aa31.52■■■□□ 2.64
LRRC42-204ENST00000444987 ADCY10Q96PN6 1610 aa31.5■■■□□ 2.63
LRRC42-204ENST00000444987 KIF21BO75037 1637 aa31.49■■■□□ 2.63
LRRC42-204ENST00000444987 NPM1P06748 294 aaKnown RBP eCLIP31.46■■■□□ 2.63
LRRC42-204ENST00000444987 FAM9AQ8IZU1 332 aaPredicted RBP31.44■■■□□ 2.62
LRRC42-204ENST00000444987 UHRF1BP1LA0JNW5 1464 aa31.4■■■□□ 2.62
LRRC42-204ENST00000444987 MAPKBP1O60336 1514 aa31.4■■■□□ 2.62
LRRC42-204ENST00000444987 UACAQ9BZF9 1416 aa31.37■■■□□ 2.61
LRRC42-204ENST00000444987 ABCC2Q92887 1545 aa31.34■■■□□ 2.61
LRRC42-204ENST00000444987 TTBK1Q5TCY1 1321 aaPredicted RBP31.32■■■□□ 2.6
LRRC42-204ENST00000444987 SAMD9Q5K651 1589 aa31.28■■■□□ 2.6
LRRC42-204ENST00000444987 KIF13AQ9H1H9 1805 aa31.25■■■□□ 2.59
LRRC42-204ENST00000444987 ABCC10Q5T3U5 1492 aa31.24■■■□□ 2.59
LRRC42-204ENST00000444987 KDM5BQ9UGL1 1544 aa31.23■■■□□ 2.59
LRRC42-204ENST00000444987 ABCA8O94911 1581 aa31.2■■■□□ 2.58
LRRC42-204ENST00000444987 DIP2BQ9P265 1576 aa31.17■■■□□ 2.58
LRRC42-204ENST00000444987 PLB1Q6P1J6 1458 aa31.16■■■□□ 2.58
LRRC42-204ENST00000444987 EFCAB5A4FU69 1503 aa31.15■■■□□ 2.58
LRRC42-204ENST00000444987 ZCCHC11Q5TAX3 1644 aaKnown RBP31.13■■■□□ 2.57
LRRC42-204ENST00000444987 UBTFP17480 764 aaKnown RBP31.11■■■□□ 2.57
LRRC42-204ENST00000444987 FAM69CQ0P6D2 419 aa31.11■■■□□ 2.57
LRRC42-204ENST00000444987 ASXL2Q76L83 1435 aa31.11■■■□□ 2.57
LRRC42-204ENST00000444987 P3H3Q8IVL6 736 aa31.09■■■□□ 2.57
LRRC42-204ENST00000444987 GLI2P10070 1586 aa31.04■■■□□ 2.56
LRRC42-204ENST00000444987 RAPGEF6Q8TEU7 1601 aa31.01■■■□□ 2.55
LRRC42-204ENST00000444987 RANGAP1P46060 587 aaPredicted RBP30.99■■■□□ 2.55
LRRC42-204ENST00000444987 FHOD3Q2V2M9 1422 aa30.98■■■□□ 2.55
LRRC42-204ENST00000444987 WDR7Q9Y4E6 1490 aa30.95■■■□□ 2.55
LRRC42-204ENST00000444987 EPRSP07814 1512 aaKnown RBP30.95■■■□□ 2.55
LRRC42-204ENST00000444987 EHMT2Q96KQ7 1210 aa30.95■■■□□ 2.55
LRRC42-204ENST00000444987 ATP10BO94823 1461 aa30.9■■■□□ 2.54
LRRC42-204ENST00000444987 ARHGAP35Q9NRY4 1499 aa30.88■■■□□ 2.53
LRRC42-204ENST00000444987 MAP3K4Q9Y6R4 1608 aa30.86■■■□□ 2.53
LRRC42-204ENST00000444987 TSPOAP1O95153 1857 aa30.86■■■□□ 2.53
LRRC42-204ENST00000444987 NUP153P49790 1475 aaKnown RBP30.85■■■□□ 2.53
LRRC42-204ENST00000444987 FMN1Q68DA7 1419 aa30.85■■■□□ 2.53
LRRC42-204ENST00000444987 PPRC1Q5VV67 1664 aaKnown RBP30.79■■■□□ 2.52
LRRC42-204ENST00000444987 CFAP43Q8NDM7 1665 aa30.78■■■□□ 2.52
LRRC42-204ENST00000444987 TEX14Q8IWB6 1497 aa30.76■■■□□ 2.51
LRRC42-204ENST00000444987 ARID3CA6NKF2 412 aa30.73■■■□□ 2.51
LRRC42-204ENST00000444987 KDM6BO15054 1643 aa30.72■■■□□ 2.51
LRRC42-204ENST00000444987 KCNH8Q96L42 1107 aa30.71■■■□□ 2.51
LRRC42-204ENST00000444987 HECW1Q76N89 1606 aa30.71■■■□□ 2.51
LRRC42-204ENST00000444987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.7■■■□□ 2.51
LRRC42-204ENST00000444987 HNRNPUL2Q1KMD3 747 aaKnown RBP30.7■■■□□ 2.51
LRRC42-204ENST00000444987 MAGI3Q5TCQ9 1506 aa30.68■■■□□ 2.5
LRRC42-204ENST00000444987 CD109Q6YHK3 1445 aa30.68■■■□□ 2.5
LRRC42-204ENST00000444987 ABCA9Q8IUA7 1624 aa30.66■■■□□ 2.5
LRRC42-204ENST00000444987 PLEKHD1A6NEE1 506 aa30.65■■■□□ 2.5
LRRC42-204ENST00000444987 CLIP1P30622 1438 aa30.64■■■□□ 2.5
LRRC42-204ENST00000444987 CDK13Q14004 1512 aaKnown RBP30.57■■■□□ 2.49
LRRC42-204ENST00000444987 CASKIN1Q8WXD9 1431 aa30.56■■■□□ 2.48
LRRC42-204ENST00000444987 ATP1B4Q9UN42 357 aaPredicted RBP30.53■■■□□ 2.48
LRRC42-204ENST00000444987 CDK11AQ9UQ88 783 aaPredicted RBP30.53■■■□□ 2.48
LRRC42-204ENST00000444987 PCF11O94913 1555 aaKnown RBP30.51■■■□□ 2.47
LRRC42-204ENST00000444987 PHLDB1Q86UU1 1377 aa30.51■■■□□ 2.47
LRRC42-204ENST00000444987 CCDC18Q5T9S5 1454 aa30.5■■■□□ 2.47
LRRC42-204ENST00000444987 FYCO1Q9BQS8 1478 aa30.5■■■□□ 2.47
LRRC42-204ENST00000444987 LRRIQ1Q96JM4 1722 aa30.48■■■□□ 2.47
LRRC42-204ENST00000444987 CEP162Q5TB80 1403 aa30.47■■■□□ 2.47
LRRC42-204ENST00000444987 COL17A1Q9UMD9 1497 aaPredicted RBP30.45■■■□□ 2.47
LRRC42-204ENST00000444987 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.45■■■□□ 2.47
LRRC42-204ENST00000444987 NEO1Q92859 1461 aa30.44■■■□□ 2.46
LRRC42-204ENST00000444987 ARAP3Q8WWN8 1544 aa30.42■■■□□ 2.46
LRRC42-204ENST00000444987 TROQ12816 1431 aaPredicted RBP30.4■■■□□ 2.46
LRRC42-204ENST00000444987 CFAP74Q9C0B2 1584 aa30.38■■■□□ 2.45
LRRC42-204ENST00000444987 TTC37Q6PGP7 1564 aa30.37■■■□□ 2.45
LRRC42-204ENST00000444987 KIF14Q15058 1648 aa30.36■■■□□ 2.45
LRRC42-204ENST00000444987 LOC105371045A0A1W2PR82 267 aa30.35■■■□□ 2.45
LRRC42-204ENST00000444987 FANCAO15360 1455 aa30.3■■■□□ 2.44
LRRC42-204ENST00000444987 PLCH2O75038 1416 aa30.3■■■□□ 2.44
LRRC42-204ENST00000444987 MYO5CQ9NQX4 1742 aa30.29■■■□□ 2.44
LRRC42-204ENST00000444987 AKNAQ7Z591 1439 aa30.24■■■□□ 2.43
LRRC42-204ENST00000444987 DENND4BO75064 1496 aaPredicted RBP30.18■■■□□ 2.42
LRRC42-204ENST00000444987 EFCAB2Q5VUJ9 269 aa30.17■■■□□ 2.42
LRRC42-204ENST00000444987 FRMPD1Q5SYB0 1578 aa30.15■■■□□ 2.42
LRRC42-204ENST00000444987 VPS8Q8N3P4 1428 aa30.15■■■□□ 2.42
LRRC42-204ENST00000444987 RICTORQ6R327 1708 aa30.15■■■□□ 2.42
LRRC42-204ENST00000444987 PREX2Q70Z35 1606 aa30.12■■■□□ 2.41
LRRC42-204ENST00000444987 RAPGEF3O95398 923 aa30.12■■■□□ 2.41
LRRC42-204ENST00000444987 ADGRL1O94910 1474 aa30.12■■■□□ 2.41
LRRC42-204ENST00000444987 ARHGAP5Q13017 1502 aa30.12■■■□□ 2.41
LRRC42-204ENST00000444987 CDC42BPBQ9Y5S2 1711 aa30.1■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms