RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 PBRM1Q86U86 1689 aa19.55■□□□□ 0.72
HDAC8-215ENST00000444609 PRG4Q92954 1404 aaPredicted RBP19.53■□□□□ 0.72
HDAC8-215ENST00000444609 CUX1P39880 1505 aa19.52■□□□□ 0.72
HDAC8-215ENST00000444609 JPH4Q96JJ6 628 aa19.49■□□□□ 0.71
HDAC8-215ENST00000444609 ILDR2Q71H61 639 aa19.46■□□□□ 0.71
HDAC8-215ENST00000444609 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
HDAC8-215ENST00000444609 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
HDAC8-215ENST00000444609 TSPOAP1O95153 1857 aa19.43■□□□□ 0.7
HDAC8-215ENST00000444609 ADAMTS12P58397 1594 aa19.39■□□□□ 0.69
HDAC8-215ENST00000444609 FHAD1B1AJZ9 1412 aa19.38■□□□□ 0.69
HDAC8-215ENST00000444609 ADCY10Q96PN6 1610 aa19.38■□□□□ 0.69
HDAC8-215ENST00000444609 COL17A1Q9UMD9 1497 aaPredicted RBP19.35■□□□□ 0.69
HDAC8-215ENST00000444609 DISP3Q9P2K9 1392 aa19.31■□□□□ 0.68
HDAC8-215ENST00000444609 TOP2BQ02880 1626 aa19.24■□□□□ 0.67
HDAC8-215ENST00000444609 PPRC1Q5VV67 1664 aaKnown RBP19.24■□□□□ 0.67
HDAC8-215ENST00000444609 GLI2P10070 1586 aa19.22■□□□□ 0.67
HDAC8-215ENST00000444609 WRNQ14191 1432 aaPredicted RBP eCLIP19.18■□□□□ 0.66
HDAC8-215ENST00000444609 ASXL2Q76L83 1435 aa19.17■□□□□ 0.66
HDAC8-215ENST00000444609 PLB1Q6P1J6 1458 aa19.17■□□□□ 0.66
HDAC8-215ENST00000444609 ERICH3Q5RHP9 1530 aa19.15■□□□□ 0.66
HDAC8-215ENST00000444609 RUSC2Q8N2Y8 1516 aa19.13■□□□□ 0.65
HDAC8-215ENST00000444609 TEX14Q8IWB6 1497 aa19.11■□□□□ 0.65
HDAC8-215ENST00000444609 CERKQ8TCT0 537 aa19.11■□□□□ 0.65
HDAC8-215ENST00000444609 ABCC2Q92887 1545 aa19.1■□□□□ 0.65
HDAC8-215ENST00000444609 PTPRGP23470 1445 aa19.1■□□□□ 0.65
HDAC8-215ENST00000444609 EPRSP07814 1512 aaKnown RBP19.04■□□□□ 0.64
HDAC8-215ENST00000444609 PTPRMP28827 1452 aa19.03■□□□□ 0.64
HDAC8-215ENST00000444609 KIAA0586Q9BVV6 1533 aa19.02■□□□□ 0.64
HDAC8-215ENST00000444609 TTBK1Q5TCY1 1321 aaPredicted RBP19.01■□□□□ 0.63
HDAC8-215ENST00000444609 MAP3K4Q9Y6R4 1608 aa19.01■□□□□ 0.63
HDAC8-215ENST00000444609 PCF11O94913 1555 aaKnown RBP18.97■□□□□ 0.63
HDAC8-215ENST00000444609 TNIKQ9UKE5 1360 aa18.95■□□□□ 0.62
HDAC8-215ENST00000444609 UHRF1BP1LA0JNW5 1464 aa18.95■□□□□ 0.62
HDAC8-215ENST00000444609 SPATA31D1Q6ZQQ2 1576 aa18.92■□□□□ 0.62
HDAC8-215ENST00000444609 UACAQ9BZF9 1416 aa18.9■□□□□ 0.62
HDAC8-215ENST00000444609 KIF21BO75037 1637 aa18.89■□□□□ 0.62
HDAC8-215ENST00000444609 HSPA2P54652 639 aa18.89■□□□□ 0.61
HDAC8-215ENST00000444609 CUL7Q14999 1698 aa18.88■□□□□ 0.61
HDAC8-215ENST00000444609 CARMIL2Q6F5E8 1435 aa18.87■□□□□ 0.61
HDAC8-215ENST00000444609 KDM5BQ9UGL1 1544 aa18.87■□□□□ 0.61
HDAC8-215ENST00000444609 ADAMTSL3P82987 1691 aa18.86■□□□□ 0.61
HDAC8-215ENST00000444609 MAGI3Q5TCQ9 1506 aa18.84■□□□□ 0.61
HDAC8-215ENST00000444609 CD109Q6YHK3 1445 aa18.83■□□□□ 0.6
HDAC8-215ENST00000444609 BIVM-ERCC5R4GMW8 1640 aa18.82■□□□□ 0.6
HDAC8-215ENST00000444609 WDR7Q9Y4E6 1490 aa18.77■□□□□ 0.6
HDAC8-215ENST00000444609 IGF1RP08069 1367 aa18.76■□□□□ 0.59
HDAC8-215ENST00000444609 ARAP3Q8WWN8 1544 aa18.73■□□□□ 0.59
HDAC8-215ENST00000444609 ZCCHC11Q5TAX3 1644 aaKnown RBP18.72■□□□□ 0.59
HDAC8-215ENST00000444609 KCNH8Q96L42 1107 aa18.72■□□□□ 0.59
HDAC8-215ENST00000444609 ARID4BQ4LE39 1312 aaPredicted RBP18.71■□□□□ 0.59
HDAC8-215ENST00000444609 MADDQ8WXG6 1647 aa18.7■□□□□ 0.58
HDAC8-215ENST00000444609 BCORL1Q5H9F3 1711 aa18.67■□□□□ 0.58
HDAC8-215ENST00000444609 DISP1Q96F81 1524 aa18.66■□□□□ 0.58
HDAC8-215ENST00000444609 CFAP43Q8NDM7 1665 aa18.66■□□□□ 0.58
HDAC8-215ENST00000444609 RAPGEF3O95398 923 aa18.64■□□□□ 0.57
HDAC8-215ENST00000444609 PLPPR3Q6T4P5 718 aa18.63■□□□□ 0.57
HDAC8-215ENST00000444609 DMRT2Q9Y5R5 561 aa18.62■□□□□ 0.57
HDAC8-215ENST00000444609 PHLDB1Q86UU1 1377 aa18.61■□□□□ 0.57
HDAC8-215ENST00000444609 IQGAP2Q13576 1575 aa18.58■□□□□ 0.56
HDAC8-215ENST00000444609 YEATS2Q9ULM3 1422 aa18.57■□□□□ 0.56
HDAC8-215ENST00000444609 RIMS1Q86UR5 1692 aaKnown RBP18.57■□□□□ 0.56
HDAC8-215ENST00000444609 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
HDAC8-215ENST00000444609 KIF27Q86VH2 1401 aa18.54■□□□□ 0.56
HDAC8-215ENST00000444609 UGGT2Q9NYU1 1516 aa18.48■□□□□ 0.55
HDAC8-215ENST00000444609 POGZQ7Z3K3 1410 aa18.46■□□□□ 0.55
HDAC8-215ENST00000444609 IQSEC2Q5JU85 1478 aa18.46■□□□□ 0.54
HDAC8-215ENST00000444609 NEO1Q92859 1461 aa18.44■□□□□ 0.54
HDAC8-215ENST00000444609 KIAA0556O60303 1618 aa18.43■□□□□ 0.54
HDAC8-215ENST00000444609 PTPRTO14522 1441 aa18.42■□□□□ 0.54
HDAC8-215ENST00000444609 FRMPD1Q5SYB0 1578 aa18.42■□□□□ 0.54
HDAC8-215ENST00000444609 LTBP4Q8N2S1 1624 aa18.41■□□□□ 0.54
HDAC8-215ENST00000444609 STRCQ7RTU9 1775 aa18.4■□□□□ 0.54
HDAC8-215ENST00000444609 MLECQ14165 292 aa18.38■□□□□ 0.53
HDAC8-215ENST00000444609 FANCAO15360 1455 aa18.38■□□□□ 0.53
HDAC8-215ENST00000444609 ARHGEF40Q8TER5 1519 aa18.38■□□□□ 0.53
HDAC8-215ENST00000444609 ABCA8O94911 1581 aa18.38■□□□□ 0.53
HDAC8-215ENST00000444609 AKNAQ7Z591 1439 aa18.35■□□□□ 0.53
HDAC8-215ENST00000444609 UBAP1LF5GYI3 381 aa18.35■□□□□ 0.53
HDAC8-215ENST00000444609 CEBPAP49715 358 aaPredicted RBP18.35■□□□□ 0.53
HDAC8-215ENST00000444609 TTC37Q6PGP7 1564 aa18.34■□□□□ 0.53
HDAC8-215ENST00000444609 ABCA9Q8IUA7 1624 aa18.34■□□□□ 0.53
HDAC8-215ENST00000444609 PREX1Q8TCU6 1659 aa18.31■□□□□ 0.52
HDAC8-215ENST00000444609 DENND4BO75064 1496 aaPredicted RBP18.31■□□□□ 0.52
HDAC8-215ENST00000444609 FHOD3Q2V2M9 1422 aa18.31■□□□□ 0.52
HDAC8-215ENST00000444609 ARID3CA6NKF2 412 aa18.3■□□□□ 0.52
HDAC8-215ENST00000444609 UHRF1BP1Q6BDS2 1440 aa18.3■□□□□ 0.52
HDAC8-215ENST00000444609 ATP10BO94823 1461 aa18.28■□□□□ 0.52
HDAC8-215ENST00000444609 MED1Q15648 1581 aaPredicted RBP18.28■□□□□ 0.52
HDAC8-215ENST00000444609 SIGLEC1Q9BZZ2 1709 aa18.26■□□□□ 0.51
HDAC8-215ENST00000444609 HSPA1LP34931 641 aa18.24■□□□□ 0.51
HDAC8-215ENST00000444609 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
HDAC8-215ENST00000444609 FER1L4A9Z1Z3 1794 aa18.23■□□□□ 0.51
HDAC8-215ENST00000444609 GOLGA3Q08378 1498 aa18.23■□□□□ 0.51
HDAC8-215ENST00000444609 RAPGEF2Q9Y4G8 1499 aa18.22■□□□□ 0.51
HDAC8-215ENST00000444609 PHF23Q9BUL5 403 aaPredicted RBP18.22■□□□□ 0.51
HDAC8-215ENST00000444609 ZFYVE16Q7Z3T8 1539 aa18.22■□□□□ 0.51
HDAC8-215ENST00000444609 MAGI2Q86UL8 1455 aa18.21■□□□□ 0.51
HDAC8-215ENST00000444609 RICTORQ6R327 1708 aa18.2■□□□□ 0.5
HDAC8-215ENST00000444609 SUPT5HO00267 1087 aaKnown RBP18.2■□□□□ 0.5
HDAC8-215ENST00000444609 EFCAB5A4FU69 1503 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms