RNA–Protein interactions for RNA: ENST00000444490.6

ECM2-204, Transcript of extracellular matrix protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ECM2, Length 2,648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM2-204ENST00000444490 SYNJ2O15056 1496 aa17.73■□□□□ 0.43
ECM2-204ENST00000444490 PCGF6Q9BYE7 350 aa17.73■□□□□ 0.43
ECM2-204ENST00000444490 GRIN2AQ12879 1464 aa17.73■□□□□ 0.43
ECM2-204ENST00000444490 CTTNBP2Q8WZ74 1663 aa17.7■□□□□ 0.42
ECM2-204ENST00000444490 PPARGC1BQ86YN6 1023 aaKnown RBP17.68■□□□□ 0.42
ECM2-204ENST00000444490 CHD1O14646 1710 aa17.68■□□□□ 0.42
ECM2-204ENST00000444490 CEP170Q5SW79 1584 aa17.65■□□□□ 0.42
ECM2-204ENST00000444490 ARHGAP35Q9NRY4 1499 aa17.64■□□□□ 0.41
ECM2-204ENST00000444490 TTBK1Q5TCY1 1321 aaPredicted RBP17.64■□□□□ 0.41
ECM2-204ENST00000444490 ARAP1Q96P48 1450 aa17.62■□□□□ 0.41
ECM2-204ENST00000444490 IQGAP2Q13576 1575 aa17.6■□□□□ 0.41
ECM2-204ENST00000444490 FHOD3Q2V2M9 1422 aa17.6■□□□□ 0.41
ECM2-204ENST00000444490 NUP160Q12769 1436 aa17.57■□□□□ 0.4
ECM2-204ENST00000444490 KIAA0586Q9BVV6 1533 aa17.57■□□□□ 0.4
ECM2-204ENST00000444490 TRIM26Q12899 539 aaPredicted RBP17.55■□□□□ 0.4
ECM2-204ENST00000444490 ATP1B4Q9UN42 357 aaPredicted RBP17.53■□□□□ 0.4
ECM2-204ENST00000444490 VPS8Q8N3P4 1428 aa17.52■□□□□ 0.4
ECM2-204ENST00000444490 JPH4Q96JJ6 628 aa17.52■□□□□ 0.4
ECM2-204ENST00000444490 SAMD9Q5K651 1589 aa17.49■□□□□ 0.39
ECM2-204ENST00000444490 EFCAB5A4FU69 1503 aa17.48■□□□□ 0.39
ECM2-204ENST00000444490 UGGT2Q9NYU1 1516 aa17.47■□□□□ 0.39
ECM2-204ENST00000444490 DISP1Q96F81 1524 aa17.46■□□□□ 0.39
ECM2-204ENST00000444490 ARID3CA6NKF2 412 aa17.46■□□□□ 0.39
ECM2-204ENST00000444490 KIAA0556O60303 1618 aa17.43■□□□□ 0.38
ECM2-204ENST00000444490 PRG4Q92954 1404 aaPredicted RBP17.43■□□□□ 0.38
ECM2-204ENST00000444490 PCF11O94913 1555 aaKnown RBP17.41■□□□□ 0.38
ECM2-204ENST00000444490 ERCC6L2Q5T890 1561 aa17.41■□□□□ 0.38
ECM2-204ENST00000444490 APLP2Q06481 763 aa17.41■□□□□ 0.38
ECM2-204ENST00000444490 OSCARQ8IYS5 282 aa17.4■□□□□ 0.38
ECM2-204ENST00000444490 CLASP1Q7Z460 1538 aa17.39■□□□□ 0.37
ECM2-204ENST00000444490 CARMIL2Q6F5E8 1435 aa17.37■□□□□ 0.37
ECM2-204ENST00000444490 HRCP23327 699 aa17.36■□□□□ 0.37
ECM2-204ENST00000444490 KANK4Q5T7N3 995 aaPredicted RBP17.36■□□□□ 0.37
ECM2-204ENST00000444490 FMN1Q68DA7 1419 aa17.36■□□□□ 0.37
ECM2-204ENST00000444490 SHROOM2Q13796 1616 aa17.33■□□□□ 0.37
ECM2-204ENST00000444490 CASKIN1Q8WXD9 1431 aa17.31■□□□□ 0.36
ECM2-204ENST00000444490 PLB1Q6P1J6 1458 aa17.31■□□□□ 0.36
ECM2-204ENST00000444490 FYCO1Q9BQS8 1478 aa17.29■□□□□ 0.36
ECM2-204ENST00000444490 LRRIQ1Q96JM4 1722 aa17.29■□□□□ 0.36
ECM2-204ENST00000444490 PTPRGP23470 1445 aa17.28■□□□□ 0.36
ECM2-204ENST00000444490 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.35
ECM2-204ENST00000444490 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.35
ECM2-204ENST00000444490 CDK13Q14004 1512 aaKnown RBP17.26■□□□□ 0.35
ECM2-204ENST00000444490 TIAM1Q13009 1591 aa17.25■□□□□ 0.35
ECM2-204ENST00000444490 RAPGEF6Q8TEU7 1601 aa17.24■□□□□ 0.35
ECM2-204ENST00000444490 HECW1Q76N89 1606 aa17.21■□□□□ 0.35
ECM2-204ENST00000444490 NUP153P49790 1475 aaKnown RBP17.21■□□□□ 0.35
ECM2-204ENST00000444490 CFAP43Q8NDM7 1665 aa17.2■□□□□ 0.34
ECM2-204ENST00000444490 EPRSP07814 1512 aaKnown RBP17.2■□□□□ 0.34
ECM2-204ENST00000444490 LRRC9Q6ZRR7 1453 aa17.18■□□□□ 0.34
ECM2-204ENST00000444490 ABCA8O94911 1581 aa17.17■□□□□ 0.34
ECM2-204ENST00000444490 MTUS2Q5JR59 1369 aa17.16■□□□□ 0.34
ECM2-204ENST00000444490 MAGI3Q5TCQ9 1506 aa17.16■□□□□ 0.34
ECM2-204ENST00000444490 UACAQ9BZF9 1416 aa17.14■□□□□ 0.34
ECM2-204ENST00000444490 MAP3K1Q13233 1512 aa17.13■□□□□ 0.33
ECM2-204ENST00000444490 CCDC18Q5T9S5 1454 aa17.13■□□□□ 0.33
ECM2-204ENST00000444490 ARHGEF11O15085 1522 aa17.11■□□□□ 0.33
ECM2-204ENST00000444490 ATP10BO94823 1461 aa17.1■□□□□ 0.33
ECM2-204ENST00000444490 PHLDB1Q86UU1 1377 aa17.08■□□□□ 0.33
ECM2-204ENST00000444490 CYB5RLQ6IPT4 315 aa17.08■□□□□ 0.32
ECM2-204ENST00000444490 ABCC2Q92887 1545 aa17.07■□□□□ 0.32
ECM2-204ENST00000444490 RIMBP3CA6NJZ7 1639 aa17.05■□□□□ 0.32
ECM2-204ENST00000444490 RIMBP3BA6NNM3 1639 aa17.05■□□□□ 0.32
ECM2-204ENST00000444490 ADCY10Q96PN6 1610 aa17.05■□□□□ 0.32
ECM2-204ENST00000444490 RIMBP3Q9UFD9 1639 aa17.05■□□□□ 0.32
ECM2-204ENST00000444490 EHBP1L1Q8N3D4 1523 aa17.04■□□□□ 0.32
ECM2-204ENST00000444490 CDK11AQ9UQ88 783 aaPredicted RBP17.03■□□□□ 0.32
ECM2-204ENST00000444490 NCOA2Q15596 1464 aa17.03■□□□□ 0.32
ECM2-204ENST00000444490 PLEKHD1A6NEE1 506 aa17.03■□□□□ 0.32
ECM2-204ENST00000444490 ITGAEP38570 1179 aa17.03■□□□□ 0.32
ECM2-204ENST00000444490 KCNH8Q96L42 1107 aa17.02■□□□□ 0.32
ECM2-204ENST00000444490 SUPT6HQ7KZ85 1726 aaKnown RBP17.01■□□□□ 0.31
ECM2-204ENST00000444490 FAM50AQ14320 339 aaKnown RBP17■□□□□ 0.31
ECM2-204ENST00000444490 KIF14Q15058 1648 aa17■□□□□ 0.31
ECM2-204ENST00000444490 ZCCHC11Q5TAX3 1644 aaKnown RBP17■□□□□ 0.31
ECM2-204ENST00000444490 TROQ12816 1431 aaPredicted RBP16.99■□□□□ 0.31
ECM2-204ENST00000444490 UHRF1BP1LA0JNW5 1464 aa16.98■□□□□ 0.31
ECM2-204ENST00000444490 KDM5BQ9UGL1 1544 aa16.95■□□□□ 0.3
ECM2-204ENST00000444490 CCNB3Q8WWL7 1395 aa16.95■□□□□ 0.3
ECM2-204ENST00000444490 ZEB1P37275 1124 aaPredicted RBP16.93■□□□□ 0.3
ECM2-204ENST00000444490 RRBP1Q9P2E9 1410 aaKnown RBP16.93■□□□□ 0.3
ECM2-204ENST00000444490 NPM1P06748 294 aaKnown RBP eCLIP16.93■□□□□ 0.3
ECM2-204ENST00000444490 MYOM3Q5VTT5 1437 aa16.92■□□□□ 0.3
ECM2-204ENST00000444490 FGD6Q6ZV73 1430 aa16.92■□□□□ 0.3
ECM2-204ENST00000444490 ZNF777Q9ULD5 760 aaPredicted RBP16.92■□□□□ 0.3
ECM2-204ENST00000444490 ZNF644Q9H582 1327 aaPredicted RBP16.91■□□□□ 0.3
ECM2-204ENST00000444490 CCER1Q8TC90 406 aaPredicted RBP16.89■□□□□ 0.29
ECM2-204ENST00000444490 ASXL2Q76L83 1435 aa16.88■□□□□ 0.29
ECM2-204ENST00000444490 TTC37Q6PGP7 1564 aa16.86■□□□□ 0.29
ECM2-204ENST00000444490 CFDP1Q9UEE9 299 aaPredicted RBP16.86■□□□□ 0.29
ECM2-204ENST00000444490 ABCC10Q5T3U5 1492 aa16.86■□□□□ 0.29
ECM2-204ENST00000444490 GPATCH8Q9UKJ3 1502 aaKnown RBP16.85■□□□□ 0.29
ECM2-204ENST00000444490 PTPN23Q9H3S7 1636 aa16.85■□□□□ 0.29
ECM2-204ENST00000444490 WDR7Q9Y4E6 1490 aa16.84■□□□□ 0.29
ECM2-204ENST00000444490 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.84■□□□□ 0.29
ECM2-204ENST00000444490 CDC42BPAQ5VT25 1732 aa16.83■□□□□ 0.28
ECM2-204ENST00000444490 CHIC2Q9UKJ5 165 aa16.81■□□□□ 0.28
ECM2-204ENST00000444490 ITSN2Q9NZM3 1697 aa16.78■□□□□ 0.28
ECM2-204ENST00000444490 PTPRKQ15262 1439 aa16.78■□□□□ 0.28
ECM2-204ENST00000444490 MIA2Q96PC5 1412 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms