RNA–Protein interactions for RNA: ENST00000444438.2

LINC00843-202, long intergenic non-protein coding RNA 843, humanhuman

TSL 5 BASIC

Gene LINC00843, Length 550 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00843-202ENST00000444438 RIMBP3BA6NNM3 1639 aa17.21■□□□□ 0.35
LINC00843-202ENST00000444438 RIMBP3Q9UFD9 1639 aa17.21■□□□□ 0.35
LINC00843-202ENST00000444438 IGF1RP08069 1367 aa17.2■□□□□ 0.34
LINC00843-202ENST00000444438 NUP160Q12769 1436 aa17.2■□□□□ 0.34
LINC00843-202ENST00000444438 TRIM41Q8WV44 630 aa17.18■□□□□ 0.34
LINC00843-202ENST00000444438 CUL7Q14999 1698 aa17.14■□□□□ 0.33
LINC00843-202ENST00000444438 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
LINC00843-202ENST00000444438 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
LINC00843-202ENST00000444438 CARMIL1Q5VZK9 1371 aa17.11■□□□□ 0.33
LINC00843-202ENST00000444438 ARAP1Q96P48 1450 aa17.09■□□□□ 0.33
LINC00843-202ENST00000444438 JPH4Q96JJ6 628 aa17.04■□□□□ 0.32
LINC00843-202ENST00000444438 KIAA0586Q9BVV6 1533 aa17.04■□□□□ 0.32
LINC00843-202ENST00000444438 SHROOM2Q13796 1616 aa17.03■□□□□ 0.32
LINC00843-202ENST00000444438 RUSC2Q8N2Y8 1516 aa17■□□□□ 0.31
LINC00843-202ENST00000444438 RAPGEF2Q9Y4G8 1499 aa16.99■□□□□ 0.31
LINC00843-202ENST00000444438 PRG4Q92954 1404 aaPredicted RBP16.98■□□□□ 0.31
LINC00843-202ENST00000444438 SCAF1Q9H7N4 1312 aaKnown RBP16.97■□□□□ 0.31
LINC00843-202ENST00000444438 EEA1Q15075 1411 aa16.96■□□□□ 0.3
LINC00843-202ENST00000444438 ERCC6L2Q5T890 1561 aa16.91■□□□□ 0.3
LINC00843-202ENST00000444438 CSRNP3Q8WYN3 585 aa16.9■□□□□ 0.3
LINC00843-202ENST00000444438 PRXQ9BXM0 1461 aa16.9■□□□□ 0.3
LINC00843-202ENST00000444438 CARMIL2Q6F5E8 1435 aa16.89■□□□□ 0.29
LINC00843-202ENST00000444438 IQGAP2Q13576 1575 aa16.89■□□□□ 0.29
LINC00843-202ENST00000444438 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
LINC00843-202ENST00000444438 UGGT2Q9NYU1 1516 aa16.81■□□□□ 0.28
LINC00843-202ENST00000444438 TNIKQ9UKE5 1360 aa16.81■□□□□ 0.28
LINC00843-202ENST00000444438 PTPRGP23470 1445 aa16.8■□□□□ 0.28
LINC00843-202ENST00000444438 TRHP20396 242 aaPredicted RBP16.8■□□□□ 0.28
LINC00843-202ENST00000444438 NPM1P06748 294 aaKnown RBP eCLIP16.79■□□□□ 0.28
LINC00843-202ENST00000444438 GOLGA3Q08378 1498 aa16.77■□□□□ 0.28
LINC00843-202ENST00000444438 DISP1Q96F81 1524 aa16.75■□□□□ 0.27
LINC00843-202ENST00000444438 CTTNBP2Q8WZ74 1663 aa16.75■□□□□ 0.27
LINC00843-202ENST00000444438 FAM9AQ8IZU1 332 aaPredicted RBP16.73■□□□□ 0.27
LINC00843-202ENST00000444438 KIAA0556O60303 1618 aa16.7■□□□□ 0.26
LINC00843-202ENST00000444438 UHRF1BP1LA0JNW5 1464 aa16.69■□□□□ 0.26
LINC00843-202ENST00000444438 KIF21BO75037 1637 aa16.69■□□□□ 0.26
LINC00843-202ENST00000444438 UACAQ9BZF9 1416 aa16.68■□□□□ 0.26
LINC00843-202ENST00000444438 ADCY10Q96PN6 1610 aa16.67■□□□□ 0.26
LINC00843-202ENST00000444438 MAPKBP1O60336 1514 aa16.67■□□□□ 0.26
LINC00843-202ENST00000444438 TTBK1Q5TCY1 1321 aaPredicted RBP16.65■□□□□ 0.26
LINC00843-202ENST00000444438 ABCC2Q92887 1545 aa16.65■□□□□ 0.26
LINC00843-202ENST00000444438 ABCC10Q5T3U5 1492 aa16.6■□□□□ 0.25
LINC00843-202ENST00000444438 KDM5BQ9UGL1 1544 aa16.59■□□□□ 0.25
LINC00843-202ENST00000444438 DCAF8L1A6NGE4 600 aa16.58■□□□□ 0.24
LINC00843-202ENST00000444438 UBTFP17480 764 aaKnown RBP16.58■□□□□ 0.24
LINC00843-202ENST00000444438 PLB1Q6P1J6 1458 aa16.58■□□□□ 0.24
LINC00843-202ENST00000444438 SAMD9Q5K651 1589 aa16.56■□□□□ 0.24
LINC00843-202ENST00000444438 FAM69CQ0P6D2 419 aa16.56■□□□□ 0.24
LINC00843-202ENST00000444438 EFCAB5A4FU69 1503 aa16.55■□□□□ 0.24
LINC00843-202ENST00000444438 ABCA8O94911 1581 aa16.53■□□□□ 0.24
LINC00843-202ENST00000444438 ASXL2Q76L83 1435 aa16.53■□□□□ 0.24
LINC00843-202ENST00000444438 P3H3Q8IVL6 736 aa16.52■□□□□ 0.24
LINC00843-202ENST00000444438 DIP2BQ9P265 1576 aa16.51■□□□□ 0.23
LINC00843-202ENST00000444438 KIF13AQ9H1H9 1805 aa16.5■□□□□ 0.23
LINC00843-202ENST00000444438 ZCCHC11Q5TAX3 1644 aaKnown RBP16.47■□□□□ 0.23
LINC00843-202ENST00000444438 GLI2P10070 1586 aa16.47■□□□□ 0.23
LINC00843-202ENST00000444438 RANGAP1P46060 587 aaPredicted RBP16.46■□□□□ 0.23
LINC00843-202ENST00000444438 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
LINC00843-202ENST00000444438 WDR7Q9Y4E6 1490 aa16.45■□□□□ 0.22
LINC00843-202ENST00000444438 FHOD3Q2V2M9 1422 aa16.45■□□□□ 0.22
LINC00843-202ENST00000444438 EPRSP07814 1512 aaKnown RBP16.44■□□□□ 0.22
LINC00843-202ENST00000444438 HOXD11P31277 338 aaPredicted RBP16.43■□□□□ 0.22
LINC00843-202ENST00000444438 FMN1Q68DA7 1419 aa16.43■□□□□ 0.22
LINC00843-202ENST00000444438 RAPGEF6Q8TEU7 1601 aa16.42■□□□□ 0.22
LINC00843-202ENST00000444438 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
LINC00843-202ENST00000444438 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
LINC00843-202ENST00000444438 ATP10BO94823 1461 aa16.41■□□□□ 0.22
LINC00843-202ENST00000444438 ARHGAP35Q9NRY4 1499 aa16.39■□□□□ 0.21
LINC00843-202ENST00000444438 NUP153P49790 1475 aaKnown RBP16.37■□□□□ 0.21
LINC00843-202ENST00000444438 TEX14Q8IWB6 1497 aa16.36■□□□□ 0.21
LINC00843-202ENST00000444438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.36■□□□□ 0.21
LINC00843-202ENST00000444438 HNRNPUL2Q1KMD3 747 aaKnown RBP16.36■□□□□ 0.21
LINC00843-202ENST00000444438 PLEKHD1A6NEE1 506 aa16.34■□□□□ 0.21
LINC00843-202ENST00000444438 KCNH8Q96L42 1107 aa16.34■□□□□ 0.21
LINC00843-202ENST00000444438 MAP3K4Q9Y6R4 1608 aa16.34■□□□□ 0.21
LINC00843-202ENST00000444438 ARID3CA6NKF2 412 aa16.32■□□□□ 0.2
LINC00843-202ENST00000444438 CD109Q6YHK3 1445 aa16.32■□□□□ 0.2
LINC00843-202ENST00000444438 MAGI3Q5TCQ9 1506 aa16.31■□□□□ 0.2
LINC00843-202ENST00000444438 CDK11AQ9UQ88 783 aaPredicted RBP16.31■□□□□ 0.2
LINC00843-202ENST00000444438 TSPOAP1O95153 1857 aa16.31■□□□□ 0.2
LINC00843-202ENST00000444438 CFAP43Q8NDM7 1665 aa16.3■□□□□ 0.2
LINC00843-202ENST00000444438 CLIP1P30622 1438 aa16.29■□□□□ 0.2
LINC00843-202ENST00000444438 HECW1Q76N89 1606 aa16.29■□□□□ 0.2
LINC00843-202ENST00000444438 KDM6BO15054 1643 aa16.28■□□□□ 0.2
LINC00843-202ENST00000444438 PHLDB1Q86UU1 1377 aa16.27■□□□□ 0.2
LINC00843-202ENST00000444438 PPRC1Q5VV67 1664 aaKnown RBP16.26■□□□□ 0.19
LINC00843-202ENST00000444438 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
LINC00843-202ENST00000444438 ABCA9Q8IUA7 1624 aa16.25■□□□□ 0.19
LINC00843-202ENST00000444438 CASKIN1Q8WXD9 1431 aa16.24■□□□□ 0.19
LINC00843-202ENST00000444438 CCDC18Q5T9S5 1454 aa16.22■□□□□ 0.19
LINC00843-202ENST00000444438 CDK13Q14004 1512 aaKnown RBP16.2■□□□□ 0.18
LINC00843-202ENST00000444438 FYCO1Q9BQS8 1478 aa16.2■□□□□ 0.18
LINC00843-202ENST00000444438 CEP162Q5TB80 1403 aa16.19■□□□□ 0.18
LINC00843-202ENST00000444438 NEO1Q92859 1461 aa16.18■□□□□ 0.18
LINC00843-202ENST00000444438 CNKSR2Q8WXI2 1034 aa16.17■□□□□ 0.18
LINC00843-202ENST00000444438 ARAP3Q8WWN8 1544 aa16.17■□□□□ 0.18
LINC00843-202ENST00000444438 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
LINC00843-202ENST00000444438 TROQ12816 1431 aaPredicted RBP16.16■□□□□ 0.18
LINC00843-202ENST00000444438 COL17A1Q9UMD9 1497 aaPredicted RBP16.16■□□□□ 0.18
LINC00843-202ENST00000444438 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms