RNA–Protein interactions for RNA: ENST00000443927.5

ITSN2-208, Transcript of intersectin 2, human

TSL 3

Gene ITSN2, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN2-208	ENST00000443927	IGF1R	P08069	1367 aa		33.75	■■■□□ 2.99
ITSN2-208	ENST00000443927	JPH4	Q96JJ6	628 aa		33.67	■■■□□ 2.98
ITSN2-208	ENST00000443927	KIAA0586	Q9BVV6	1533 aa		33.63	■■■□□ 2.97
ITSN2-208	ENST00000443927	CARMIL1	Q5VZK9	1371 aa		33.57	■■■□□ 2.96
ITSN2-208	ENST00000443927	IQGAP2	Q13576	1575 aa		33.45	■■■□□ 2.95
ITSN2-208	ENST00000443927	ADCY10	Q96PN6	1610 aa		33.45	■■■□□ 2.95
ITSN2-208	ENST00000443927	KIF13A	Q9H1H9	1805 aa		33.44	■■■□□ 2.94
ITSN2-208	ENST00000443927	RAPGEF2	Q9Y4G8	1499 aa		33.35	■■■□□ 2.93
ITSN2-208	ENST00000443927	MAPKBP1	O60336	1514 aa		33.32	■■■□□ 2.92
ITSN2-208	ENST00000443927	CARMIL2	Q6F5E8	1435 aa		33.29	■■■□□ 2.92
ITSN2-208	ENST00000443927	NPM1	P06748	294 aa	Known RBP eCLIP	33.24	■■■□□ 2.91
ITSN2-208	ENST00000443927	PTPRG	P23470	1445 aa		33.24	■■■□□ 2.91
ITSN2-208	ENST00000443927	CTTNBP2	Q8WZ74	1663 aa		33.23	■■■□□ 2.91
ITSN2-208	ENST00000443927	DIP2B	Q9P265	1576 aa		33.23	■■■□□ 2.91
ITSN2-208	ENST00000443927	TNIK	Q9UKE5	1360 aa		33.21	■■■□□ 2.91
ITSN2-208	ENST00000443927	DISP1	Q96F81	1524 aa		33.21	■■■□□ 2.91
ITSN2-208	ENST00000443927	ABCC10	Q5T3U5	1492 aa		33.2	■■■□□ 2.91
ITSN2-208	ENST00000443927	UGGT2	Q9NYU1	1516 aa		33.19	■■■□□ 2.9
ITSN2-208	ENST00000443927	TTBK1	Q5TCY1	1321 aa	Predicted RBP	33.19	■■■□□ 2.9
ITSN2-208	ENST00000443927	KIAA0556	O60303	1618 aa		33.14	■■■□□ 2.9
ITSN2-208	ENST00000443927	ABCC2	Q92887	1545 aa		33.1	■■■□□ 2.89
ITSN2-208	ENST00000443927	FAM69C	Q0P6D2	419 aa		33.09	■■■□□ 2.89
ITSN2-208	ENST00000443927	PRX	Q9BXM0	1461 aa		33.05	■■■□□ 2.88
ITSN2-208	ENST00000443927	UHRF1BP1L	A0JNW5	1464 aa		33.04	■■■□□ 2.88
ITSN2-208	ENST00000443927	UACA	Q9BZF9	1416 aa		33.02	■■■□□ 2.88
ITSN2-208	ENST00000443927	TSPOAP1	O95153	1857 aa		33.01	■■■□□ 2.88
ITSN2-208	ENST00000443927	ASXL2	Q76L83	1435 aa		32.94	■■■□□ 2.86
ITSN2-208	ENST00000443927	ZCCHC11	Q5TAX3	1644 aa	Known RBP	32.93	■■■□□ 2.86
ITSN2-208	ENST00000443927	GOLGA3	Q08378	1498 aa		32.93	■■■□□ 2.86
ITSN2-208	ENST00000443927	PLB1	Q6P1J6	1458 aa		32.91	■■■□□ 2.86
ITSN2-208	ENST00000443927	KDM5B	Q9UGL1	1544 aa		32.9	■■■□□ 2.86
ITSN2-208	ENST00000443927	KDM6B	O15054	1643 aa		32.88	■■■□□ 2.85
ITSN2-208	ENST00000443927	GLI2	P10070	1586 aa		32.84	■■■□□ 2.85
ITSN2-208	ENST00000443927	PPRC1	Q5VV67	1664 aa	Known RBP	32.81	■■■□□ 2.84
ITSN2-208	ENST00000443927	ABCA8	O94911	1581 aa		32.78	■■■□□ 2.84
ITSN2-208	ENST00000443927	EEA1	Q15075	1411 aa		32.77	■■■□□ 2.84
ITSN2-208	ENST00000443927	CSRNP3	Q8WYN3	585 aa		32.77	■■■□□ 2.84
ITSN2-208	ENST00000443927	EPRS	P07814	1512 aa	Known RBP	32.75	■■■□□ 2.83
ITSN2-208	ENST00000443927	MAP3K4	Q9Y6R4	1608 aa		32.74	■■■□□ 2.83
ITSN2-208	ENST00000443927	AEBP2	Q6ZN18	517 aa	Predicted RBP	32.72	■■■□□ 2.83
ITSN2-208	ENST00000443927	WDR7	Q9Y4E6	1490 aa		32.7	■■■□□ 2.83
ITSN2-208	ENST00000443927	SAMD9	Q5K651	1589 aa		32.7	■■■□□ 2.82
ITSN2-208	ENST00000443927	KIF21B	O75037	1637 aa		32.6	■■■□□ 2.81
ITSN2-208	ENST00000443927	P3H3	Q8IVL6	736 aa		32.58	■■■□□ 2.81
ITSN2-208	ENST00000443927	FAM9A	Q8IZU1	332 aa	Predicted RBP	32.58	■■■□□ 2.81
ITSN2-208	ENST00000443927	TEX14	Q8IWB6	1497 aa		32.57	■■■□□ 2.8
ITSN2-208	ENST00000443927	CFAP43	Q8NDM7	1665 aa		32.55	■■■□□ 2.8
ITSN2-208	ENST00000443927	RAPGEF6	Q8TEU7	1601 aa		32.52	■■■□□ 2.8
ITSN2-208	ENST00000443927	ARID3C	A6NKF2	412 aa		32.45	■■■□□ 2.79
ITSN2-208	ENST00000443927	ATP10B	O94823	1461 aa		32.43	■■■□□ 2.78
ITSN2-208	ENST00000443927	COL17A1	Q9UMD9	1497 aa	Predicted RBP	32.43	■■■□□ 2.78
ITSN2-208	ENST00000443927	RANGAP1	P46060	587 aa	Predicted RBP	32.43	■■■□□ 2.78
ITSN2-208	ENST00000443927	FHOD3	Q2V2M9	1422 aa		32.43	■■■□□ 2.78
ITSN2-208	ENST00000443927	KCNH8	Q96L42	1107 aa		32.41	■■■□□ 2.78
ITSN2-208	ENST00000443927	EFCAB5	A4FU69	1503 aa		32.41	■■■□□ 2.78
ITSN2-208	ENST00000443927	CD109	Q6YHK3	1445 aa		32.4	■■■□□ 2.78
ITSN2-208	ENST00000443927	MAGI3	Q5TCQ9	1506 aa		32.4	■■■□□ 2.78
ITSN2-208	ENST00000443927	CHIC1	Q5VXU3	224 aa		32.38	■■■□□ 2.77
ITSN2-208	ENST00000443927	NUP153	P49790	1475 aa	Known RBP	32.35	■■■□□ 2.77
ITSN2-208	ENST00000443927	ABCA9	Q8IUA7	1624 aa		32.33	■■■□□ 2.77
ITSN2-208	ENST00000443927	KDM4F	A0A1W2PPD8	638 aa		32.25	■■■□□ 2.75
ITSN2-208	ENST00000443927	EHMT2	Q96KQ7	1210 aa		32.25	■■■□□ 2.75
ITSN2-208	ENST00000443927	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	32.22	■■■□□ 2.75
ITSN2-208	ENST00000443927	HNRNPUL2	Q1KMD3	747 aa	Known RBP	32.22	■■■□□ 2.75
ITSN2-208	ENST00000443927	ADGRL1	O94910	1474 aa		32.2	■■■□□ 2.75
ITSN2-208	ENST00000443927	UBTF	P17480	764 aa	Known RBP	32.18	■■■□□ 2.74
ITSN2-208	ENST00000443927	ARAP3	Q8WWN8	1544 aa		32.13	■■■□□ 2.73
ITSN2-208	ENST00000443927	CDK13	Q14004	1512 aa	Known RBP	32.1	■■■□□ 2.73
ITSN2-208	ENST00000443927	ARHGAP35	Q9NRY4	1499 aa		32.1	■■■□□ 2.73
ITSN2-208	ENST00000443927	HECW1	Q76N89	1606 aa		32.08	■■■□□ 2.73
ITSN2-208	ENST00000443927	NEO1	Q92859	1461 aa		32.06	■■■□□ 2.72
ITSN2-208	ENST00000443927	TTC37	Q6PGP7	1564 aa		32.04	■■■□□ 2.72
ITSN2-208	ENST00000443927	FMN1	Q68DA7	1419 aa		32.04	■■■□□ 2.72
ITSN2-208	ENST00000443927	PHLDB1	Q86UU1	1377 aa		32.03	■■■□□ 2.72
ITSN2-208	ENST00000443927	PLEKHD1	A6NEE1	506 aa		32.02	■■■□□ 2.72
ITSN2-208	ENST00000443927	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	32.01	■■■□□ 2.72
ITSN2-208	ENST00000443927	FRMPD1	Q5SYB0	1578 aa		32	■■■□□ 2.71
ITSN2-208	ENST00000443927	CFAP74	Q9C0B2	1584 aa		32	■■■□□ 2.71
ITSN2-208	ENST00000443927	LRRIQ1	Q96JM4	1722 aa		31.92	■■■□□ 2.7
ITSN2-208	ENST00000443927	FANCA	O15360	1455 aa		31.91	■■■□□ 2.7
ITSN2-208	ENST00000443927	RICTOR	Q6R327	1708 aa		31.91	■■■□□ 2.7
ITSN2-208	ENST00000443927	ATP1B4	Q9UN42	357 aa	Predicted RBP	31.9	■■■□□ 2.7
ITSN2-208	ENST00000443927	RAPGEF3	O95398	923 aa		31.89	■■■□□ 2.7
ITSN2-208	ENST00000443927	PCF11	O94913	1555 aa	Known RBP	31.86	■■■□□ 2.69
ITSN2-208	ENST00000443927	MYO5C	Q9NQX4	1742 aa		31.85	■■■□□ 2.69
ITSN2-208	ENST00000443927	KIF14	Q15058	1648 aa		31.84	■■■□□ 2.69
ITSN2-208	ENST00000443927	ARHGEF40	Q8TER5	1519 aa		31.84	■■■□□ 2.69
ITSN2-208	ENST00000443927	AKNA	Q7Z591	1439 aa		31.83	■■■□□ 2.69
ITSN2-208	ENST00000443927	DENND4B	O75064	1496 aa	Predicted RBP	31.83	■■■□□ 2.69
ITSN2-208	ENST00000443927	ZMYM4	Q5VZL5	1548 aa		31.75	■■■□□ 2.67
ITSN2-208	ENST00000443927	TRO	Q12816	1431 aa	Predicted RBP	31.75	■■■□□ 2.67
ITSN2-208	ENST00000443927	CDK11A	Q9UQ88	783 aa	Predicted RBP	31.74	■■■□□ 2.67
ITSN2-208	ENST00000443927	PLCH2	O75038	1416 aa		31.74	■■■□□ 2.67
ITSN2-208	ENST00000443927	CLIP1	P30622	1438 aa		31.73	■■■□□ 2.67
ITSN2-208	ENST00000443927	ADAMTSL3	P82987	1691 aa		31.73	■■■□□ 2.67
ITSN2-208	ENST00000443927	CASKIN1	Q8WXD9	1431 aa		31.72	■■■□□ 2.67
ITSN2-208	ENST00000443927	HECW2	Q9P2P5	1572 aa		31.72	■■■□□ 2.67
ITSN2-208	ENST00000443927	BCORL1	Q5H9F3	1711 aa		31.72	■■■□□ 2.67
ITSN2-208	ENST00000443927	CCDC18	Q5T9S5	1454 aa		31.72	■■■□□ 2.67
ITSN2-208	ENST00000443927	FYCO1	Q9BQS8	1478 aa		31.68	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms