RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 ERICH3Q5RHP9 1530 aa22.04■■□□□ 1.12
SF1-210ENST00000443908 ADAMTS12P58397 1594 aa22.03■■□□□ 1.12
SF1-210ENST00000443908 CEP170Q5SW79 1584 aa22.03■■□□□ 1.12
SF1-210ENST00000443908 KIF21BO75037 1637 aa22.02■■□□□ 1.11
SF1-210ENST00000443908 IGF1RP08069 1367 aa22.01■■□□□ 1.11
SF1-210ENST00000443908 PRXQ9BXM0 1461 aa22■■□□□ 1.11
SF1-210ENST00000443908 PRG4Q92954 1404 aaPredicted RBP21.98■■□□□ 1.11
SF1-210ENST00000443908 CUL7Q14999 1698 aa21.98■■□□□ 1.11
SF1-210ENST00000443908 NPM1P06748 294 aaKnown RBP eCLIP21.97■■□□□ 1.11
SF1-210ENST00000443908 GOLGA3Q08378 1498 aa21.92■■□□□ 1.1
SF1-210ENST00000443908 CARMIL1Q5VZK9 1371 aa21.89■■□□□ 1.1
SF1-210ENST00000443908 SHROOM2Q13796 1616 aa21.88■■□□□ 1.09
SF1-210ENST00000443908 FAM69CQ0P6D2 419 aa21.88■■□□□ 1.09
SF1-210ENST00000443908 RAPGEF2Q9Y4G8 1499 aa21.87■■□□□ 1.09
SF1-210ENST00000443908 TTBK1Q5TCY1 1321 aaPredicted RBP21.8■■□□□ 1.08
SF1-210ENST00000443908 LOC105371045A0A1W2PR82 267 aa21.8■■□□□ 1.08
SF1-210ENST00000443908 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.08
SF1-210ENST00000443908 KIAA0586Q9BVV6 1533 aa21.71■■□□□ 1.07
SF1-210ENST00000443908 ABCC10Q5T3U5 1492 aa21.7■■□□□ 1.06
SF1-210ENST00000443908 UBTFP17480 764 aaKnown RBP21.69■■□□□ 1.06
SF1-210ENST00000443908 KIF13AQ9H1H9 1805 aa21.68■■□□□ 1.06
SF1-210ENST00000443908 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
SF1-210ENST00000443908 PTPRGP23470 1445 aa21.65■■□□□ 1.06
SF1-210ENST00000443908 CTTNBP2Q8WZ74 1663 aa21.64■■□□□ 1.05
SF1-210ENST00000443908 MAPKBP1O60336 1514 aa21.6■■□□□ 1.05
SF1-210ENST00000443908 ADCY10Q96PN6 1610 aa21.6■■□□□ 1.05
SF1-210ENST00000443908 CEP162Q5TB80 1403 aa21.59■■□□□ 1.05
SF1-210ENST00000443908 CARMIL2Q6F5E8 1435 aa21.58■■□□□ 1.05
SF1-210ENST00000443908 DIP2BQ9P265 1576 aa21.53■■□□□ 1.04
SF1-210ENST00000443908 IQGAP2Q13576 1575 aa21.52■■□□□ 1.04
SF1-210ENST00000443908 CLIP1P30622 1438 aa21.51■■□□□ 1.03
SF1-210ENST00000443908 TSPOAP1O95153 1857 aa21.49■■□□□ 1.03
SF1-210ENST00000443908 KDM4FA0A1W2PPD8 638 aa21.48■■□□□ 1.03
SF1-210ENST00000443908 EFCAB5A4FU69 1503 aa21.48■■□□□ 1.03
SF1-210ENST00000443908 KDM6BO15054 1643 aa21.47■■□□□ 1.03
SF1-210ENST00000443908 UGGT2Q9NYU1 1516 aa21.45■■□□□ 1.02
SF1-210ENST00000443908 ABCC2Q92887 1545 aa21.45■■□□□ 1.02
SF1-210ENST00000443908 ASXL2Q76L83 1435 aa21.44■■□□□ 1.02
SF1-210ENST00000443908 SAMD9Q5K651 1589 aa21.43■■□□□ 1.02
SF1-210ENST00000443908 PLB1Q6P1J6 1458 aa21.42■■□□□ 1.02
SF1-210ENST00000443908 UACAQ9BZF9 1416 aa21.42■■□□□ 1.02
SF1-210ENST00000443908 ARHGAP35Q9NRY4 1499 aa21.42■■□□□ 1.02
SF1-210ENST00000443908 UHRF1BP1LA0JNW5 1464 aa21.35■■□□□ 1.01
SF1-210ENST00000443908 DISP1Q96F81 1524 aa21.34■■□□□ 1.01
SF1-210ENST00000443908 KIAA0556O60303 1618 aa21.32■■□□□ 1
SF1-210ENST00000443908 VPS8Q8N3P4 1428 aa21.3■■□□□ 1
SF1-210ENST00000443908 RANGAP1P46060 587 aaPredicted RBP21.3■■□□□ 1
SF1-210ENST00000443908 KCNH8Q96L42 1107 aa21.3■■□□□ 1
SF1-210ENST00000443908 GLI2P10070 1586 aa21.28■■□□□ 1
SF1-210ENST00000443908 EPRSP07814 1512 aaKnown RBP21.26■□□□□ 0.99
SF1-210ENST00000443908 KDM5BQ9UGL1 1544 aa21.26■□□□□ 0.99
SF1-210ENST00000443908 FHOD3Q2V2M9 1422 aa21.26■□□□□ 0.99
SF1-210ENST00000443908 FMN1Q68DA7 1419 aa21.24■□□□□ 0.99
SF1-210ENST00000443908 TEX14Q8IWB6 1497 aa21.21■□□□□ 0.99
SF1-210ENST00000443908 COL17A1Q9UMD9 1497 aaPredicted RBP21.21■□□□□ 0.99
SF1-210ENST00000443908 P3H3Q8IVL6 736 aa21.19■□□□□ 0.98
SF1-210ENST00000443908 PPRC1Q5VV67 1664 aaKnown RBP21.18■□□□□ 0.98
SF1-210ENST00000443908 ARID3CA6NKF2 412 aa21.18■□□□□ 0.98
SF1-210ENST00000443908 ZCCHC11Q5TAX3 1644 aaKnown RBP21.18■□□□□ 0.98
SF1-210ENST00000443908 ADGRL1O94910 1474 aa21.16■□□□□ 0.98
SF1-210ENST00000443908 FYCO1Q9BQS8 1478 aa21.15■□□□□ 0.98
SF1-210ENST00000443908 WDR7Q9Y4E6 1490 aa21.15■□□□□ 0.98
SF1-210ENST00000443908 CD109Q6YHK3 1445 aa21.14■□□□□ 0.98
SF1-210ENST00000443908 CASKIN1Q8WXD9 1431 aa21.14■□□□□ 0.98
SF1-210ENST00000443908 PCF11O94913 1555 aaKnown RBP21.14■□□□□ 0.97
SF1-210ENST00000443908 MAP3K4Q9Y6R4 1608 aa21.13■□□□□ 0.97
SF1-210ENST00000443908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.09■□□□□ 0.97
SF1-210ENST00000443908 HNRNPUL2Q1KMD3 747 aaKnown RBP21.09■□□□□ 0.97
SF1-210ENST00000443908 MAP3K1Q13233 1512 aa21.08■□□□□ 0.96
SF1-210ENST00000443908 ILDR1Q86SU0 546 aaPredicted RBP21.07■□□□□ 0.96
SF1-210ENST00000443908 HECW1Q76N89 1606 aa21.07■□□□□ 0.96
SF1-210ENST00000443908 RAPGEF6Q8TEU7 1601 aa21.05■□□□□ 0.96
SF1-210ENST00000443908 ABCA8O94911 1581 aa21.04■□□□□ 0.96
SF1-210ENST00000443908 MAGI3Q5TCQ9 1506 aa21.02■□□□□ 0.96
SF1-210ENST00000443908 CFAP43Q8NDM7 1665 aa21.01■□□□□ 0.95
SF1-210ENST00000443908 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
SF1-210ENST00000443908 TIAM1Q13009 1591 aa21■□□□□ 0.95
SF1-210ENST00000443908 NUP153P49790 1475 aaKnown RBP20.97■□□□□ 0.95
SF1-210ENST00000443908 APLP2Q06481 763 aa20.97■□□□□ 0.95
SF1-210ENST00000443908 ATP10BO94823 1461 aa20.96■□□□□ 0.95
SF1-210ENST00000443908 LRRIQ1Q96JM4 1722 aa20.95■□□□□ 0.94
SF1-210ENST00000443908 RAPGEF3O95398 923 aa20.93■□□□□ 0.94
SF1-210ENST00000443908 ARID4BQ4LE39 1312 aaPredicted RBP20.89■□□□□ 0.93
SF1-210ENST00000443908 HECW2Q9P2P5 1572 aa20.89■□□□□ 0.93
SF1-210ENST00000443908 LRRC9Q6ZRR7 1453 aa20.88■□□□□ 0.93
SF1-210ENST00000443908 PLEKHD1A6NEE1 506 aa20.88■□□□□ 0.93
SF1-210ENST00000443908 ATP1B4Q9UN42 357 aaPredicted RBP20.88■□□□□ 0.93
SF1-210ENST00000443908 PHLDB1Q86UU1 1377 aa20.87■□□□□ 0.93
SF1-210ENST00000443908 CDK13Q14004 1512 aaKnown RBP20.87■□□□□ 0.93
SF1-210ENST00000443908 ARAP3Q8WWN8 1544 aa20.86■□□□□ 0.93
SF1-210ENST00000443908 EHBP1L1Q8N3D4 1523 aa20.85■□□□□ 0.93
SF1-210ENST00000443908 KANK4Q5T7N3 995 aaPredicted RBP20.81■□□□□ 0.92
SF1-210ENST00000443908 CDK11AQ9UQ88 783 aaPredicted RBP20.79■□□□□ 0.92
SF1-210ENST00000443908 MTUS2Q5JR59 1369 aa20.79■□□□□ 0.92
SF1-210ENST00000443908 ABCA9Q8IUA7 1624 aa20.76■□□□□ 0.91
SF1-210ENST00000443908 NEO1Q92859 1461 aa20.75■□□□□ 0.91
SF1-210ENST00000443908 PLPPR3Q6T4P5 718 aa20.75■□□□□ 0.91
SF1-210ENST00000443908 TROQ12816 1431 aaPredicted RBP20.75■□□□□ 0.91
SF1-210ENST00000443908 SUPT6HQ7KZ85 1726 aaKnown RBP20.73■□□□□ 0.91
SF1-210ENST00000443908 PPARGC1BQ86YN6 1023 aaKnown RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms