RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 SYNJ2O15056 1496 aa14.98□□□□□ -0.01
SMPD4P1-203ENST00000443839 CHMP7Q8WUX9 453 aaPredicted RBP14.98□□□□□ -0.01
SMPD4P1-203ENST00000443839 GRIN2AQ12879 1464 aa14.97□□□□□ -0.01
SMPD4P1-203ENST00000443839 FBLN2P98095 1184 aa14.96□□□□□ -0.01
SMPD4P1-203ENST00000443839 ARHGAP35Q9NRY4 1499 aa14.94□□□□□ -0.02
SMPD4P1-203ENST00000443839 VPS8Q8N3P4 1428 aa14.92□□□□□ -0.02
SMPD4P1-203ENST00000443839 ARAP1Q96P48 1450 aa14.92□□□□□ -0.02
SMPD4P1-203ENST00000443839 IQGAP2Q13576 1575 aa14.9□□□□□ -0.02
SMPD4P1-203ENST00000443839 EFCAB5A4FU69 1503 aa14.9□□□□□ -0.02
SMPD4P1-203ENST00000443839 KIAA0586Q9BVV6 1533 aa14.87□□□□□ -0.03
SMPD4P1-203ENST00000443839 P3H3Q8IVL6 736 aa14.87□□□□□ -0.03
SMPD4P1-203ENST00000443839 CEP170Q5SW79 1584 aa14.86□□□□□ -0.03
SMPD4P1-203ENST00000443839 NUP160Q12769 1436 aa14.84□□□□□ -0.03
SMPD4P1-203ENST00000443839 CHD1O14646 1710 aa14.84□□□□□ -0.03
SMPD4P1-203ENST00000443839 SAMD9Q5K651 1589 aa14.84□□□□□ -0.03
SMPD4P1-203ENST00000443839 FHOD3Q2V2M9 1422 aa14.84□□□□□ -0.03
SMPD4P1-203ENST00000443839 PPARGC1BQ86YN6 1023 aaKnown RBP14.83□□□□□ -0.04
SMPD4P1-203ENST00000443839 APLP2Q06481 763 aa14.82□□□□□ -0.04
SMPD4P1-203ENST00000443839 UGGT2Q9NYU1 1516 aa14.81□□□□□ -0.04
SMPD4P1-203ENST00000443839 FMN1Q68DA7 1419 aa14.78□□□□□ -0.04
SMPD4P1-203ENST00000443839 TTBK1Q5TCY1 1321 aaPredicted RBP14.76□□□□□ -0.05
SMPD4P1-203ENST00000443839 SENP3Q9H4L4 574 aaPredicted RBP14.75□□□□□ -0.05
SMPD4P1-203ENST00000443839 JPH4Q96JJ6 628 aa14.75□□□□□ -0.05
SMPD4P1-203ENST00000443839 PCF11O94913 1555 aaKnown RBP14.74□□□□□ -0.05
SMPD4P1-203ENST00000443839 KIAA0556O60303 1618 aa14.74□□□□□ -0.05
SMPD4P1-203ENST00000443839 DISP1Q96F81 1524 aa14.74□□□□□ -0.05
SMPD4P1-203ENST00000443839 TRIM26Q12899 539 aaPredicted RBP14.74□□□□□ -0.05
SMPD4P1-203ENST00000443839 PLPPR3Q6T4P5 718 aa14.74□□□□□ -0.05
SMPD4P1-203ENST00000443839 ATP1B4Q9UN42 357 aaPredicted RBP14.73□□□□□ -0.05
SMPD4P1-203ENST00000443839 FYCO1Q9BQS8 1478 aa14.72□□□□□ -0.05
SMPD4P1-203ENST00000443839 PCGF6Q9BYE7 350 aa14.72□□□□□ -0.05
SMPD4P1-203ENST00000443839 CARMIL2Q6F5E8 1435 aa14.71□□□□□ -0.05
SMPD4P1-203ENST00000443839 CASKIN1Q8WXD9 1431 aa14.71□□□□□ -0.05
SMPD4P1-203ENST00000443839 TIAM1Q13009 1591 aa14.67□□□□□ -0.06
SMPD4P1-203ENST00000443839 PRG4Q92954 1404 aaPredicted RBP14.67□□□□□ -0.06
SMPD4P1-203ENST00000443839 MAP3K1Q13233 1512 aa14.66□□□□□ -0.06
SMPD4P1-203ENST00000443839 CLASP1Q7Z460 1538 aa14.65□□□□□ -0.06
SMPD4P1-203ENST00000443839 KANK4Q5T7N3 995 aaPredicted RBP14.65□□□□□ -0.06
SMPD4P1-203ENST00000443839 SHROOM2Q13796 1616 aa14.65□□□□□ -0.06
SMPD4P1-203ENST00000443839 CFAP43Q8NDM7 1665 aa14.64□□□□□ -0.07
SMPD4P1-203ENST00000443839 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
SMPD4P1-203ENST00000443839 LRRC9Q6ZRR7 1453 aa14.6□□□□□ -0.07
SMPD4P1-203ENST00000443839 CCDC18Q5T9S5 1454 aa14.59□□□□□ -0.07
SMPD4P1-203ENST00000443839 OSCARQ8IYS5 282 aa14.59□□□□□ -0.07
SMPD4P1-203ENST00000443839 LRRIQ1Q96JM4 1722 aa14.59□□□□□ -0.07
SMPD4P1-203ENST00000443839 RAPGEF6Q8TEU7 1601 aa14.59□□□□□ -0.07
SMPD4P1-203ENST00000443839 PLB1Q6P1J6 1458 aa14.57□□□□□ -0.08
SMPD4P1-203ENST00000443839 PTPRGP23470 1445 aa14.57□□□□□ -0.08
SMPD4P1-203ENST00000443839 EPRSP07814 1512 aaKnown RBP14.57□□□□□ -0.08
SMPD4P1-203ENST00000443839 ARID3CA6NKF2 412 aa14.56□□□□□ -0.08
SMPD4P1-203ENST00000443839 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
SMPD4P1-203ENST00000443839 MTUS2Q5JR59 1369 aa14.55□□□□□ -0.08
SMPD4P1-203ENST00000443839 NUP153P49790 1475 aaKnown RBP14.55□□□□□ -0.08
SMPD4P1-203ENST00000443839 CDK13Q14004 1512 aaKnown RBP14.54□□□□□ -0.08
SMPD4P1-203ENST00000443839 ABCA8O94911 1581 aa14.52□□□□□ -0.08
SMPD4P1-203ENST00000443839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.51□□□□□ -0.09
SMPD4P1-203ENST00000443839 HNRNPUL2Q1KMD3 747 aaKnown RBP14.51□□□□□ -0.09
SMPD4P1-203ENST00000443839 EHBP1L1Q8N3D4 1523 aa14.5□□□□□ -0.09
SMPD4P1-203ENST00000443839 UACAQ9BZF9 1416 aa14.48□□□□□ -0.09
SMPD4P1-203ENST00000443839 CDK11AQ9UQ88 783 aaPredicted RBP14.48□□□□□ -0.09
SMPD4P1-203ENST00000443839 MAGI3Q5TCQ9 1506 aa14.47□□□□□ -0.09
SMPD4P1-203ENST00000443839 SUPT6HQ7KZ85 1726 aaKnown RBP14.46□□□□□ -0.09
SMPD4P1-203ENST00000443839 PHLDB1Q86UU1 1377 aa14.46□□□□□ -0.09
SMPD4P1-203ENST00000443839 RRBP1Q9P2E9 1410 aaKnown RBP14.45□□□□□ -0.1
SMPD4P1-203ENST00000443839 NCOA2Q15596 1464 aa14.44□□□□□ -0.1
SMPD4P1-203ENST00000443839 CCNB3Q8WWL7 1395 aa14.44□□□□□ -0.1
SMPD4P1-203ENST00000443839 ABCC2Q92887 1545 aa14.43□□□□□ -0.1
SMPD4P1-203ENST00000443839 ATP10BO94823 1461 aa14.43□□□□□ -0.1
SMPD4P1-203ENST00000443839 TROQ12816 1431 aaPredicted RBP14.4□□□□□ -0.1
SMPD4P1-203ENST00000443839 PLEKHD1A6NEE1 506 aa14.39□□□□□ -0.11
SMPD4P1-203ENST00000443839 UHRF1BP1LA0JNW5 1464 aa14.39□□□□□ -0.11
SMPD4P1-203ENST00000443839 ARHGEF11O15085 1522 aa14.39□□□□□ -0.11
SMPD4P1-203ENST00000443839 MYOM3Q5VTT5 1437 aa14.38□□□□□ -0.11
SMPD4P1-203ENST00000443839 FGD6Q6ZV73 1430 aa14.37□□□□□ -0.11
SMPD4P1-203ENST00000443839 FAM50AQ14320 339 aaKnown RBP14.37□□□□□ -0.11
SMPD4P1-203ENST00000443839 KIF14Q15058 1648 aa14.34□□□□□ -0.11
SMPD4P1-203ENST00000443839 ADCY10Q96PN6 1610 aa14.34□□□□□ -0.11
SMPD4P1-203ENST00000443839 KDM5BQ9UGL1 1544 aa14.34□□□□□ -0.11
SMPD4P1-203ENST00000443839 ZCCHC11Q5TAX3 1644 aaKnown RBP14.33□□□□□ -0.11
SMPD4P1-203ENST00000443839 ITGAEP38570 1179 aa14.33□□□□□ -0.11
SMPD4P1-203ENST00000443839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.32□□□□□ -0.12
SMPD4P1-203ENST00000443839 PTPN23Q9H3S7 1636 aa14.3□□□□□ -0.12
SMPD4P1-203ENST00000443839 MIA2Q96PC5 1412 aa14.3□□□□□ -0.12
SMPD4P1-203ENST00000443839 ITSN2Q9NZM3 1697 aa14.28□□□□□ -0.12
SMPD4P1-203ENST00000443839 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 ABCC10Q5T3U5 1492 aa14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 CFDP1Q9UEE9 299 aaPredicted RBP14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 GPATCH8Q9UKJ3 1502 aaKnown RBP14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 TCOF1Q13428 1488 aaKnown RBP14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 NPM1P06748 294 aaKnown RBP eCLIP14.26□□□□□ -0.13
SMPD4P1-203ENST00000443839 KCNH8Q96L42 1107 aa14.25□□□□□ -0.13
SMPD4P1-203ENST00000443839 CDC42BPAQ5VT25 1732 aa14.24□□□□□ -0.13
SMPD4P1-203ENST00000443839 CYB5RLQ6IPT4 315 aa14.23□□□□□ -0.13
SMPD4P1-203ENST00000443839 WDR7Q9Y4E6 1490 aa14.23□□□□□ -0.13
SMPD4P1-203ENST00000443839 TTC37Q6PGP7 1564 aa14.22□□□□□ -0.13
SMPD4P1-203ENST00000443839 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.22□□□□□ -0.13
SMPD4P1-203ENST00000443839 HRCP23327 699 aa14.21□□□□□ -0.13
SMPD4P1-203ENST00000443839 ZNF777Q9ULD5 760 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms