RNA–Protein interactions for RNA: ENST00000443345.2

PDCD2-203, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 1,897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-203ENST00000443345 CHMP7Q8WUX9 453 aaPredicted RBP33.53■■■□□ 2.96
PDCD2-203ENST00000443345 FBLN2P98095 1184 aa33.48■■■□□ 2.95
PDCD2-203ENST00000443345 ARHGAP35Q9NRY4 1499 aa33.43■■■□□ 2.94
PDCD2-203ENST00000443345 ARAP1Q96P48 1450 aa33.38■■■□□ 2.93
PDCD2-203ENST00000443345 IQGAP2Q13576 1575 aa33.35■■■□□ 2.93
PDCD2-203ENST00000443345 CEP170Q5SW79 1584 aa33.34■■■□□ 2.93
PDCD2-203ENST00000443345 KIAA0586Q9BVV6 1533 aa33.33■■■□□ 2.93
PDCD2-203ENST00000443345 CHD1O14646 1710 aa33.31■■■□□ 2.92
PDCD2-203ENST00000443345 NUP160Q12769 1436 aa33.31■■■□□ 2.92
PDCD2-203ENST00000443345 VPS8Q8N3P4 1428 aa33.31■■■□□ 2.92
PDCD2-203ENST00000443345 EFCAB5A4FU69 1503 aa33.29■■■□□ 2.92
PDCD2-203ENST00000443345 P3H3Q8IVL6 736 aa33.25■■■□□ 2.91
PDCD2-203ENST00000443345 SAMD9Q5K651 1589 aa33.23■■■□□ 2.91
PDCD2-203ENST00000443345 UGGT2Q9NYU1 1516 aa33.19■■■□□ 2.9
PDCD2-203ENST00000443345 FHOD3Q2V2M9 1422 aa33.18■■■□□ 2.9
PDCD2-203ENST00000443345 JPH4Q96JJ6 628 aa33.07■■■□□ 2.88
PDCD2-203ENST00000443345 DISP1Q96F81 1524 aa33.05■■■□□ 2.88
PDCD2-203ENST00000443345 PPARGC1BQ86YN6 1023 aaKnown RBP33.04■■■□□ 2.88
PDCD2-203ENST00000443345 KIAA0556O60303 1618 aa33.02■■■□□ 2.88
PDCD2-203ENST00000443345 FMN1Q68DA7 1419 aa33.01■■■□□ 2.87
PDCD2-203ENST00000443345 APLP2Q06481 763 aa32.97■■■□□ 2.87
PDCD2-203ENST00000443345 PCF11O94913 1555 aaKnown RBP32.95■■■□□ 2.86
PDCD2-203ENST00000443345 CLASP1Q7Z460 1538 aa32.92■■■□□ 2.86
PDCD2-203ENST00000443345 CARMIL2Q6F5E8 1435 aa32.92■■■□□ 2.86
PDCD2-203ENST00000443345 CASKIN1Q8WXD9 1431 aa32.91■■■□□ 2.86
PDCD2-203ENST00000443345 SHROOM2Q13796 1616 aa32.9■■■□□ 2.86
PDCD2-203ENST00000443345 FYCO1Q9BQS8 1478 aa32.88■■■□□ 2.85
PDCD2-203ENST00000443345 PRG4Q92954 1404 aaPredicted RBP32.87■■■□□ 2.85
PDCD2-203ENST00000443345 ATP1B4Q9UN42 357 aaPredicted RBP32.84■■■□□ 2.85
PDCD2-203ENST00000443345 TTBK1Q5TCY1 1321 aaPredicted RBP32.83■■■□□ 2.85
PDCD2-203ENST00000443345 OSCARQ8IYS5 282 aa32.78■■■□□ 2.84
PDCD2-203ENST00000443345 MAP3K1Q13233 1512 aa32.78■■■□□ 2.84
PDCD2-203ENST00000443345 TRIM26Q12899 539 aaPredicted RBP32.77■■■□□ 2.84
PDCD2-203ENST00000443345 TIAM1Q13009 1591 aa32.76■■■□□ 2.84
PDCD2-203ENST00000443345 KANK4Q5T7N3 995 aaPredicted RBP32.76■■■□□ 2.83
PDCD2-203ENST00000443345 CFAP43Q8NDM7 1665 aa32.71■■■□□ 2.83
PDCD2-203ENST00000443345 LRRIQ1Q96JM4 1722 aa32.7■■■□□ 2.83
PDCD2-203ENST00000443345 ERCC6L2Q5T890 1561 aa32.7■■■□□ 2.83
PDCD2-203ENST00000443345 HECW1Q76N89 1606 aa32.69■■■□□ 2.82
PDCD2-203ENST00000443345 PCGF6Q9BYE7 350 aa32.68■■■□□ 2.82
PDCD2-203ENST00000443345 RAPGEF6Q8TEU7 1601 aa32.66■■■□□ 2.82
PDCD2-203ENST00000443345 PTPRGP23470 1445 aa32.64■■■□□ 2.81
PDCD2-203ENST00000443345 PLB1Q6P1J6 1458 aa32.63■■■□□ 2.81
PDCD2-203ENST00000443345 LRRC9Q6ZRR7 1453 aa32.62■■■□□ 2.81
PDCD2-203ENST00000443345 CCDC18Q5T9S5 1454 aa32.6■■■□□ 2.81
PDCD2-203ENST00000443345 EPRSP07814 1512 aaKnown RBP32.59■■■□□ 2.81
PDCD2-203ENST00000443345 NUP153P49790 1475 aaKnown RBP32.58■■■□□ 2.81
PDCD2-203ENST00000443345 ABCA8O94911 1581 aa32.57■■■□□ 2.8
PDCD2-203ENST00000443345 CDK13Q14004 1512 aaKnown RBP32.53■■■□□ 2.8
PDCD2-203ENST00000443345 ARID3CA6NKF2 412 aa32.52■■■□□ 2.8
PDCD2-203ENST00000443345 MTUS2Q5JR59 1369 aa32.47■■■□□ 2.79
PDCD2-203ENST00000443345 UACAQ9BZF9 1416 aa32.44■■■□□ 2.78
PDCD2-203ENST00000443345 MAGI3Q5TCQ9 1506 aa32.43■■■□□ 2.78
PDCD2-203ENST00000443345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.4■■■□□ 2.78
PDCD2-203ENST00000443345 HNRNPUL2Q1KMD3 747 aaKnown RBP32.4■■■□□ 2.78
PDCD2-203ENST00000443345 EHBP1L1Q8N3D4 1523 aa32.39■■■□□ 2.78
PDCD2-203ENST00000443345 ATP10BO94823 1461 aa32.36■■■□□ 2.77
PDCD2-203ENST00000443345 ABCC2Q92887 1545 aa32.34■■■□□ 2.77
PDCD2-203ENST00000443345 CDK11AQ9UQ88 783 aaPredicted RBP32.33■■■□□ 2.77
PDCD2-203ENST00000443345 PHLDB1Q86UU1 1377 aa32.32■■■□□ 2.76
PDCD2-203ENST00000443345 SUPT6HQ7KZ85 1726 aaKnown RBP32.3■■■□□ 2.76
PDCD2-203ENST00000443345 UHRF1BP1LA0JNW5 1464 aa32.28■■■□□ 2.76
PDCD2-203ENST00000443345 NCOA2Q15596 1464 aa32.28■■■□□ 2.76
PDCD2-203ENST00000443345 RRBP1Q9P2E9 1410 aaKnown RBP32.26■■■□□ 2.76
PDCD2-203ENST00000443345 ARHGEF11O15085 1522 aa32.22■■■□□ 2.75
PDCD2-203ENST00000443345 TROQ12816 1431 aaPredicted RBP32.22■■■□□ 2.75
PDCD2-203ENST00000443345 PLEKHD1A6NEE1 506 aa32.2■■■□□ 2.75
PDCD2-203ENST00000443345 CCNB3Q8WWL7 1395 aa32.19■■■□□ 2.74
PDCD2-203ENST00000443345 ADCY10Q96PN6 1610 aa32.18■■■□□ 2.74
PDCD2-203ENST00000443345 KDM5BQ9UGL1 1544 aa32.16■■■□□ 2.74
PDCD2-203ENST00000443345 ZCCHC11Q5TAX3 1644 aaKnown RBP32.14■■■□□ 2.73
PDCD2-203ENST00000443345 MYOM3Q5VTT5 1437 aa32.13■■■□□ 2.73
PDCD2-203ENST00000443345 FGD6Q6ZV73 1430 aa32.1■■■□□ 2.73
PDCD2-203ENST00000443345 KIF14Q15058 1648 aa32.09■■■□□ 2.73
PDCD2-203ENST00000443345 RIMBP3CA6NJZ7 1639 aa32.08■■■□□ 2.73
PDCD2-203ENST00000443345 RIMBP3BA6NNM3 1639 aa32.08■■■□□ 2.73
PDCD2-203ENST00000443345 RIMBP3Q9UFD9 1639 aa32.08■■■□□ 2.73
PDCD2-203ENST00000443345 FAM50AQ14320 339 aaKnown RBP32.03■■■□□ 2.72
PDCD2-203ENST00000443345 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.99■■■□□ 2.71
PDCD2-203ENST00000443345 ABCC10Q5T3U5 1492 aa31.97■■■□□ 2.71
PDCD2-203ENST00000443345 MIA2Q96PC5 1412 aa31.97■■■□□ 2.71
PDCD2-203ENST00000443345 PTPN23Q9H3S7 1636 aa31.95■■■□□ 2.71
PDCD2-203ENST00000443345 CYB5RLQ6IPT4 315 aa31.94■■■□□ 2.7
PDCD2-203ENST00000443345 GPATCH8Q9UKJ3 1502 aaKnown RBP31.93■■■□□ 2.7
PDCD2-203ENST00000443345 ITGAEP38570 1179 aa31.93■■■□□ 2.7
PDCD2-203ENST00000443345 NPM1P06748 294 aaKnown RBP eCLIP31.91■■■□□ 2.7
PDCD2-203ENST00000443345 ITSN2Q9NZM3 1697 aa31.91■■■□□ 2.7
PDCD2-203ENST00000443345 TCOF1Q13428 1488 aaKnown RBP31.91■■■□□ 2.7
PDCD2-203ENST00000443345 KCNH8Q96L42 1107 aa31.9■■■□□ 2.7
PDCD2-203ENST00000443345 CDC42BPAQ5VT25 1732 aa31.88■■■□□ 2.69
PDCD2-203ENST00000443345 WDR7Q9Y4E6 1490 aa31.86■■■□□ 2.69
PDCD2-203ENST00000443345 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.86■■■□□ 2.691e-6■■□□□ 13.9
PDCD2-203ENST00000443345 CFDP1Q9UEE9 299 aaPredicted RBP31.86■■■□□ 2.69
PDCD2-203ENST00000443345 ASXL2Q76L83 1435 aa31.84■■■□□ 2.69
PDCD2-203ENST00000443345 TTC37Q6PGP7 1564 aa31.83■■■□□ 2.69
PDCD2-203ENST00000443345 ZNF644Q9H582 1327 aaPredicted RBP31.8■■■□□ 2.68
PDCD2-203ENST00000443345 PREX2Q70Z35 1606 aa31.76■■■□□ 2.68
PDCD2-203ENST00000443345 CDC42BPBQ9Y5S2 1711 aa31.75■■■□□ 2.67
PDCD2-203ENST00000443345 ZNF777Q9ULD5 760 aaPredicted RBP31.75■■■□□ 2.67
PDCD2-203ENST00000443345 CAMSAP2Q08AD1 1489 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms